Sol Genomics Network

Unigene SGN-U577227

Unigene Basic Information

Unigene ID:	SGN-U577227
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1625 bp

>SGN-U577227 Tomato 200607 #2 (126 members)
GGGGATCAAAAAATCAAATTTTCTTTTTCATAATAAAATTAAAATATTCTCTCTCTTTTTTTTTTTCATAGAGAAACAGAGAGAGAGAGT
GTGTGGGGTGAAAGGAGGAAGAAGGGTGCTTTTGCTTTTCTCGAGGTTTGGGATTGAAGAGGCAGCGTAGCGAAAATGGGAGCTGGTGGT
CGTATGTCTGCTCCAAATGGCGGGACTGAAGTAAAGAAGAATCCTCTTCAAAAGGTACCAACCTCGAAGCCCCCTTTCACAGTTGGTGAT
ATTAAGAAGGCTATCCCACCTCACTGCTTTCAAAGGTCTCTCATCCGCTCATTTTCATATGTTGTGTATGACCTCATACTCGTATCCATC
ATGTACTACGTTGCAAACACTTACTTCCACCTCATTCCATCACCATATTGCTACATTGCATGGCCTATTTACTGGATTTGCCAGGGTTGT
GTTTGCACTGGAATTTGGGTTAATGCCCACGAATGTGGCCATCACGCCTTCAGTGATTACCAATTGGTTGATGACACCGTAGGACTTATC
CTTCACTCTGCTCTATTGGTGCCGTACTTCTCTTGGAAATATAGTCATCGTCGCCACCACTCCAACACTGGCTCCCTCGAGCGTGATGAA
GTCTTTGTGCCTAAGTCTAAATCCCAGCTCGGATGGTATTCCAAGTACTTGAACAATCCACTAGGCAGAGTTATCACACTCACAGTCACC
CTCACTCTTGGTTGGCCGTTGTACTTGGCATTCAATGTATCTGGCAGACCTTATGACCGATTTGCATGTCACTATGACCCTTATGGCCCA
ATCTACAACAACCGCGAGAGGCTACAGATCTTCCTTTCTGATGCTGGAGTTCTCGGAGCTTGTTATCTGTTATACCGTGTTGCCTTAGTG
AAAGGTCTAGCTTGGCTAGTGTGCATCTACGGTGTGCCCCTTCTAGTCGTGAACGGCTTCCTTGTCCTGATCACCTACTTGCAGCACACT
CACCCATCACTGCCTCACTACGACTCAACCGAGTGGGATTGGCTTAGGGGAGCTTTGGCAACCTGTGACAGAGACTATGGTGTTCTAAAC
AAGGTCTTCCACAACATCACCGACACTCACGTGGTGCACCATCTGTTCTCAGCCATGCCACACTACAACGCGATGGAGGCAACCAAAGCA
GTCAAGCCACTACTCGGAGACTACTACCAATTCGATGGTACCCCCATTTTCAAGGCAATGTGGAGGGAAGCTAAAGAGTGTCTCTACGTC
GAGAAAGACGAATCATCTCAAGGCAAAGGTGTCTTCTGGTACAAAAACAAGCTCTGAGAACACTAGAACAGAAACTCAGCTTGCTTTGTA
TTGGTCTTTTGGTACTGTTTGGTCTCTCTGTGTCTTAAGTATTTTGGATTTAAGTTAATTTAGCTAATGTGTTGTCTTTGCTAGTGAGGG
GAGGTTTATGTTTGATGAATTTTTTTTGATAAATCAAAGGACAAAAAATTTAGAAAAATGTAAAGAGGATCAAAATGCATCCTCCACCTC
CTCCTAGTATGTAATAAACTACCAGTTTTAATATAAATGGTTGTGTTTGTGTCCAAAAAANAANNNNAAANNNNNAANANCANGTCGGCC
GCCTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (29)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	5
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	10
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	6
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	12
Solanum lycopersicum	LeTransC5	Root 1.5-month old plants	561	1
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	29
Solanum lycopersicum	Sl_LeafCherry01	epidermis	226	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	8
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	8
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	cTSC	seed	2256	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (126)

Alignment image suppressed for unigene with 126 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313492	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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