Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U584707 in the current build, Tomato 200607 #2

Unigene SGN-U215536

Unigene Basic Information

Unigene ID:	SGN-U215536
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215536
mRNA sequence:	Length: 1287 bp

>SGN-U215536 Lycopersicon Combined #3 (15 members)
TAAGTGCCTGGGGCCTGGGGCCTGGAGCATGTGTTTCATGCTGTTTATGCTTATTCTATTTGAATGGAAAGACTGTTTATGTGGATCCTA
ATCCTATCATCATATTCCTCTTGTTTTTCACTCATATAAGTTTGGTCCGTGACCAAGGGCAATCAACGAATTAGGGTTTGTGTACACACA
ACATTCGGTAACAATGTCTGTTGGGAGTGGAGGAGACAAAACACTGGAGGCAATCTGTTATAGGCGCGGCTCACTTCAGTTACTTGATCA
ACGAAAACTCCCCCTAGAGACTCTTCATCTGGATATCCACGATACAAACGATGCCTGGGATGCAATTAAGGAAATGGTTGTCCGTGGGGC
ACCTGCAATTGCTATAGCTGCTGCACTGTCTTTGGCAGTAGAAGTTTCAAATTTAGCTTCTTTTGATGGGACTTCTCATGATGCATCAGT
TTTCCTTAGTAAAAAATTGGATTTTCTTGTTTCAAGTCGTCCGACAGCTGTTAATCTTTCAGATTCTGCAGTAAAGCTTAAAGAAGTTAT
AAGCAAGGCTGCTGCCATAGCCAAAGAAGCCAATTCAGTGTTTCAGGCTTACATTGAAGCTGCTGAAGTTATGCTGGAGGATGATGTTAC
TTCCAATAAGGCAATTGGTTCATATGGAGCTAGTTTTATTAAGAATTACCTGACAGACTCTAAGAATATAACAATTTTGACCCATTGCAA
CACCGGAAGTCTTGCCACAGCTGGATATGGAACTGCTCTTGGTGTTATCCGGGCACTTTATGCTGACGGAGCTTTAGAAAGGGCATACTG
CACAGAAACCCGTCCATTCAATCAGGGATCCAGATTGACTGCATTTGAATTGGTTCATGAGAACATCCCAGCCACCCTTATAGCTGATTC
AGCTGCAGCTGCATTAATGAATGCTGGTCGTGTGAAAGCTGTCATTGTTGGAGCTGATCGTATAGCTGCAAATGGTGATACTGCCAATAA
GATTGGAACTTACAACCTTGCTGTTTCTGCCATGCATCATGGTATACCATTTTACGTTGCAGCGCCTTTGACTTCTGTTGATCTATCTCT
TTCTTCTGGACAAGAAATTGTGATAGAAGAAAGATCTCCAAAGGAACTGTTACATACACGAGGAGGACTTGGTGAACAAGTTGCTGCCTC
TGGTATTTTGGTTTGGAACCCTGCATTTGATGTCACCCAAGCTAAGTTGATTAGTGGAATCATCACTGAGAAGGGTGTCATCACGAAGAA
TGGGACAGACACTTTTGATATTGCTGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	186	DUF567	77
2	24608	IF-2B AIF-2BII_fam AIF-2BI_fam	8
5	58645	IF-2B AIF-2BII_fam AIF-2BI_fam	8

Preceding Unigenes (1)

Unigene	Build
SGN-U145743	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: