Sol Genomics Network

Unigene SGN-U268113

Unigene Basic Information

Unigene ID:	SGN-U268113
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268113
mRNA sequence:	Length: 1628 bp

>SGN-U268113 Solanum tuberosum #4 (39 members)
TGTCCATACTGTTTACTAAGCGGACTCTTCGAGGACACCCAATTAACAAAAAAGCACACACCTCTGTTAGCCGTCGCTACCCAACCCACC
AAACTTCATTTTCTATATATTGTTTAACAGCGACGCTTTATACGGAAAAAAGCTATATTTCTTTTCGCAGAGAGAGAAAAAAGAGGCGAT
TTTCAGAAGAAAAAATGGCGAGTTCTAGTTTGGTGAAGCTCAACGCATCGTCATCTTCGTGGATCGGTCAACAATCGTTCAATCAACGGT
CTGGATCTTCCTGCCGGTTGCCTGTTTCTAATCGCCGTGTATCAGTCGTCCGTGCTGCTGGATCTTATACTGATGAGCTCATCAAAACCG
CTAAAACTATTGCATCTCCTGGAAGGGGCATCCTCGCCATTGATGAATCGAATGCAACTGCCGGAAAGAGACTAGCGTCAATTGGTCTGG
ACAACACAGAAGCAAACAGACAAGCTTACCGTCAACTCTTGTTGACCACTCCTGGCCTAGGTGATTACATCTCTGGATCCATTCTATTCG
AAGAGACACTTTTCCAGTCCACTACCGATGGGAAGAAGTTTGTTGACGTCTTGCGTGATCAGAATATTGTACCTGGGATCAAAGTTGACA
AGGGTTTGGTTCCCCTACCAGGATCCAACAATGAATCTTGGTGCCAAGGATTGGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGC
AAGGCGCACGTTTTGCCAAGTGGAGAACAGTTGTTAGCATTCCTTGCGGTCCTTCTGCTTTGGCTGTAAAAGAAGCAGCTTGGGGTCTTG
CTCGATATGCTGCTATCTCTCAGGACAATGGTTTAGTGCCAATAGTAGAACCTGAGATTCTTTTGGATGGAGACCACCCAATAGAACGAA
CCCTCGAAGTTGCCGAACGTGTTTGGGCAGAAGTCTTCTACTACCTAGCAGAAAACAATGTTGTTTTCGAAGGTATTTTGCTCAAACCTA
GCATGGTTACTCCTGGTGCTGAACACAAAGAAAAGGCTACCCCAGATACCATTGCTAAATACACACTTACCATGTTGAAGAGAAGAGTTC
CTCCCGCGGTTCCCGGAATCATGTTTCTGTCCGGAGGACAATCTGAAGTGGAAGCGACACTCAACCTCCACGCAATGAACCAGAGCCCCA
ACCCATGGCATGTATCTTTCTCGTATGCAAGAGCACTCCAGAACACAGTGCTCAAGACATGGCAAGGACGCCCTGAGAATGTGGATGCTG
CACAGAGGGCACTCTTGATTCGTGCAAAAGCAAACTCCTTGGCTCAGCTCGGAAAATACTCCGCAGAAGGTGAAAGTGAGGAAGCTAAGA
AGGGAATGTTTGTCAAGGGCTACACCTACTAAGCACACTTTGCTTTGATGCAACTTCTTTTTTGTGTATTTTTCAGTTTTTGTTGTTTGC
TAGATTCGAATGCTGAAGAGAAAGCTAATTGCTCTTTCTTCTTTTTTGAGCTTAAATTAGTACTGTACTTGATTAATAAGCTACTACAAG
GGGTGATTCGTCGAAACACAATCCCAGAAACTGCTCGGTTGTTTAGAAACCCTGTATAATTATATTGAGAACTGCGTAAAACGGGTAATA
TTTTCTAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
l373	L373 gene

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	3
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	IVROOT	Root	5850	4
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	PPC	leaf 6 week old	5062	2
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	3
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TUBS	Tubers	5976	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	4
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	4
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	4
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (39)

Alignment image suppressed for unigene with 39 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	205	Aldolase_I	72
2	22112	Aldolase_I	63
5	56353	Aldolase_I	62
1.1	101493	Fructose-bisphosphate aldolase class-I - Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332) - Biological Process: glycolysis (GO:0006096)	103
2	118519	Fructose-bisphosphate aldolase class-I - Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332) - Biological Process: glycolysis (GO:0006096)	69
5	129013	Fructose-bisphosphate aldolase class-I - Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332) - Biological Process: glycolysis (GO:0006096)	67

Preceding Unigenes (1)

Unigene	Build
SGN-U243202	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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