Sol Genomics Network

Unigene SGN-U271392

Unigene Basic Information

Unigene ID:	SGN-U271392
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271392
mRNA sequence:	Length: 1479 bp

>SGN-U271392 Solanum tuberosum #4 (6 members)
ACCATTCTTTCCTCCAAGCAGAAGCTTAAAGGTTTCTGTCTCTCTTCTTTTGTCTCTTCAATATCTGAATCAAAAACAATGATTTGAAAA
AGAAAAAGAAAAATTGATGGAAACCCATCAACAAATTACCTCAAAACCCCAGAAATTCATCACATCTAAACACAGAGAGTGTTGAATTTG
AAAAAAAATCATACATTCTTGATTTTGCTGAATAAAGAATTGATCTTTTTGTGTCAAGAATGGAGTTGGATAGCATTGAATGTGTATCAT
CTTCAGATGGTATGATAGATGATGATGAGATCCCTTTACATCACCCACATAATATTCATTCTCAATATTCATCTTCAAAGACACCCAACA
ACAACAACAACAATATTAACAATAGCAGCAGCAATAATGATGGGATTGCTGCAATTCATTCTACAACAAGTGTTCATGAGCTCCTTGAAT
GCCCTGTTTGTACAAATTCTATGTACCCTCCAATCCATCAGTGTCACAATGGACACACAATCTGTTCGACATGTAAAGCGAGGGCTCACA
ACCGATGTCCCACTTGTAGGCAGGAGCTTGGAGATATCAGATGTTTAGCTCTGGAAAAGGTGGCTGAATCGCTTGAGCTCCCTTGCAAAT
ATGGCTCCGTTGGCTGTCCTGAGATATTTCCTTATTACAGTAAGCTAAAACATGAGTCAGTTTGCAACTTTAGACCATACAGCTGCCCGT
ATGCTGGGTCTGAGTGCTCAGTTGTTGGTGATATTCCTTACTTGGTTTCTCATTTGAGGGATGATCACAAGGTAGACATGCACTCAGGAT
GCACTTTCAACCATCGGTATGTCAAATCTAATCCTCGAGAAGTAGAAAATGCGACGTGGATGTTGACAGTTTTCAATTGTTTTGGTCAGT
GCTTCTGTCTCCATTTTGAAGCCTTTCAGCTGGGAACAGCTCCTGTATACATGGCGTTTCTTCGGTTTATGGGAGATGAGATGGAGGCTC
GAAACTATAGCTACAGCCTGGAAGTTGGGGGAAATGGAAGAAAACTTACCTGGGAGGGTACACCCCGAAGCATAAGAGACAGTCACAGGA
AAGTAAGGGATAGTCATGATGGGCTCGTCATACAACGTAACATGGCCCTTTTCTTTTCTGGAGGGGAGAGAAAGGAGCTTAAGTTACGAG
TAACTGGAAGGATATGGAAGGAACAGCAGAATCCTGACGGAGGAGCATGTATGCCCAACCTCTGTACTTAATGCTGGTTTTGAACTCAAC
ACCTACTGTTCTTGCTGTCCCATGTACTGATTTTTCAAAACATACACAGATTCAGACATTGAAGATTGTTCGAAAAATGTGTGGAAAGTT
TTGTTCATATGTATGAACTGACCAGTGTATTTTTGTTATTAACGCTTGGAAGAGCTTGTACCATAAACATTTTAACTTATTTCTCCTAAC
AACACCTACTTGTGTGCCTGCATTGTTGCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	339	Sina	48
2	22313	Sina	35
5	56517	Sina	34
1.1	101674	TRAF-like Seven in absentia protein - Cellular Component: nucleus (GO:0005634) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511) - Biological Process: development (GO:0007275) SIAH-type	48
2	118717	TRAF-like Seven in absentia protein - Cellular Component: nucleus (GO:0005634) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511) - Biological Process: development (GO:0007275) SIAH-type TRAF-type	34
5	129183	TRAF-like Seven in absentia protein - Cellular Component: nucleus (GO:0005634) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511) - Biological Process: development (GO:0007275) SIAH-type TRAF-type	33

Preceding Unigenes (1)

Unigene	Build
SGN-U246469	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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