Sol Genomics Network

Unigene SGN-U272449

Unigene Basic Information

Unigene ID:	SGN-U272449
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272449
mRNA sequence:	Length: 1608 bp

>SGN-U272449 Solanum tuberosum #4 (9 members)
CTTTCTTGATCCCAAAACCCCTTGATAGCTCCAAAATATCTCTACAGCCTCTGCTTTCCAGAGCCAAAGTATCGGACCCTTCAACCGCCT
TCATATTTTGCTGGCTTAAATCAGTTGCTTCTTTCGTCTTTTTCATAAACCCTAATTAAACCCTTCTATACCATTTTGCTGATCTCTTCT
CTGTTGGAATATTTGAAGAAAGCAATAATGAATAGCCTTGTTCTATTGAAGAAGTCTTCTTCTTTACATGCCTCGAAAAGGGTTGCTCTT
AATGCCCTTACTCATCTATTTTTCTCGCCGTCGACGTCCGGCGACGACAAGTTCATTTCCGGAAATACCCAATTTAACAGCTTTACCACT
GTTAGTACGGCTGATACTTCAAGAAATGGAAACTGGGTTGATGGGAAATTTGGGGTTTCTGTAAGAGGGTTTCATTCAGGTGGGTATTTA
CGAGCTGGATATGCGGTGGCGGATTTACCTGAGGATGATGAAGGACTTGAGATATCGAAACTTGGTATATCTCAGGAGATCGTTTCTGCT
TTGGAGAAAAAGGGAATTACGAAGCTCTTCCCTATTCAGAGAGCTGTTCTGGAACCAGCAATGCAAGGATCTGACATGATAGGTCGAGCT
AGAACTGGAACTGGGAAGACACTAGCTTTTGGCATTCCCATCATGGATAAGATCATTCGCTTCAACGAGAAACATGGACGTGGAAGGAAT
CCTTTGGCTTTAATCTTGGCGCCTACCAGAGAACTTGCAAAACAAGTGGAAAAAGAATTTTTTGAGTCTGCTCCTGGTCTGGATACACTG
TGTGTTTATGGTGGTGTTCCCATTTCACGCCAAATGAGTTCCCTTGACAGGGGAGTTGATGTTGTTGTGGGAACGCCAGGTCGGATTATT
GATCTGCTGAAGAGGGGTGCTTTAAATTTGGCAGAAATCCAGTTTGTTGTTCTAGATGAAGCTGATCAAATGCTTAACGTGGGTTTTGCG
GAGGATGTCGAGACCATTTTAGAAAATGTTCCACAGAAGCATCAGACATTGATGTTTTCAGCCACAATGCCCAGTTGGATATTAAAAATT
ACCAACAAGTTCCTGAAAAATCCAGTTCACATTGATCTTGTAGGAGATTCTGATCAGAAACTGGCTGATGGGATTTCCTTGTTTTCAATT
GCTTGTGATATGCATCAGAAACCGGCAATTCTTGGACCTCTGATAACTGAGCATGCAAAAGGGGGCAAGTGCATTGTTTTTACTCAAACT
AAACGCGATGCTGATAAATTGTCGTATGTAATGCAAAAGAGTTTCAAATGTGAAGCTTTGCACGGGGACATCTCACAAACCCAGAGGGAG
AGAACTCTATCAGGTTTTCGCCAAGGTCAATTCAATGTGTTGGTGGCTACTGATGTTGCTGCTCGAGGACTTGATGTACCTAATGTTGAT
CTGGTGGTACATTATGAGCTTCCAAACTCATCAGAGATCTTTGGTGTCATCGATCTGGTCGAACTGGGCGTGCTGGGGCAAGAAAGGAAG
TGCAATTCTGATACCATTCTTCAGCGCCAAACATAGGGGATGTGAAAGGTATCGACCGTGATGTAGGATGCAGATTAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	2
Solanum tuberosum	STOL	Stolon	6462	3
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	3

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	24	DEAD	331
2	21985	Helicase_C DEAD	273
5	58290		9
1.1	101393	DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	340
2	118423	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	248
5	131107		8

Preceding Unigenes (2)

Unigene	Build
SGN-U250492	Solanum tuberosum #3
SGN-U256666	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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