Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U570669 in the current build, Tomato 200607 #2

Unigene SGN-U321079

Unigene Basic Information

Unigene ID:	SGN-U321079
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321079
mRNA sequence:	Length: 1514 bp

>SGN-U321079 Tomato 200607 #1 (10 members)
AAAAAAAAAAAATTAAAATGGATTCTTCATCTTCAAAAAAATTTCTTCTCCTCTTTGTAACATTCTTGAATTTTTTCAACATTTTATTAG
CAAAAAATACCCCTTTTTCTATGTCATTTCCTCTTATTTCAACACAATTATCACATAATTCATCATCTAAAGCTCTTTTTCTATCATCCC
TTATGGCAAATTCTCATCAAAATAGAAATACAAAAATTATGCCTAGAGTTGTTCCATCTTTGAATTACAAATCAACTTTTAAATATTCTA
TGGCTCTTATTATTACACTTCCTATAGGTACACCACCACAAAATCAACAAATGGTTTTGGATACTGGTAGTCAACTTTCTTGGATTCAGT
GTCATAAAAAAATTCCAAAAATACCCCCGCCAACGACGTCGTTTGATCCTTCTTTATCCTCTTCTTTTTCCGTCCTTCCTTGTAGTCATC
CTTTGTGTAAGCCGCGAATTCCCGATTTTACCCTTCCAACGTCGTGTGACCAAAATCGATTGTGTCATTACTCGTATTTTTATGCTGATG
GTACTCTGGCTGAGGGTAATCTTGTCCGTGAAAAAATTACATTTTCACGTTCCCAAAGTACCCCTCCTTTGATTCTTGGTTGCGCTACCG
AGTCCGATGATGCTGAGGGTATTTTGGGTATGAATCTTGGAAGGTTCTCATTTGCCTCCCAAGCCAAGGTACAAAAGTTCTCGTATTGCG
TGCCGATTCGACAAGGTAACCATACGGTTAAACCTACCGGAACATTCTACCTAGGGCAAAACCCGAATTCACATACGTTTCGATACGTGA
ATTTATTGACTTTTCCTCAAAGTCAACGCATGCCTAATTTGGACCCCCTAGCATACACCGTCGGTATGGTAGGGATAAAAATTGGCGAAA
AGAAATTGAATATCTCTACAAGAGTTTTTCGGCCGAATGCTGGTGGTTCAGGTCAGACGATTGTCGATTCAGGCACGGAATACACTTTTT
TGGTGGAAGAAGCGTATAATAAGGTGCGAGAAGAAATTGTTAGGTTAGTTGGTCGAAAAATGAAGAGAGGTTACGTGTTTGGTGATGCGC
TCGACATGTGTTTCGATAGCGTCCATTCGATGGAAATTGGACGATTGATAGGTGACATGACGTTGCAATTTGAAAATGGAGTTGAGATTT
TGATCAATAAGGAAAGGATGTTAGATGAAGTGGAGGGTGGGATCCATTGTGTTGGGATCGGACGGTCAGAATCACTTGGTATTGCAAGTA
ATATTATTGGCAATTTTCATCAGCAAAATCTATGGGTAGAATTTGATTTGAGAAATCGAAGAGTGGGATTTGGAAAAGGTGAGTGTAGTA
CACAAGTGTAATGGGCATTAATTATATACTATGGTATATATTTTCATAAGATTATATATCATTATAAGGGTGAAACTCGAGCATCGAAGA
GATTAGAGGTCTATATGTCTTGACCTAATTTTCTGAATATCACGTGCTCATTCCATATATATTGAATGATAATA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101417	Peptidase aspartic catalytic	227
2	118448	Peptidase aspartic catalytic Peptidase A1 pepsin - Molecular Function: pepsin A activity (GO:0004194) - Biological Process: proteolysis (GO:0006508)	130
5	130011	Peptidase aspartic catalytic Peptidase A1 pepsin - Molecular Function: pepsin A activity (GO:0004194) - Biological Process: proteolysis (GO:0006508)	13

Preceding Unigenes (1)

Unigene	Build
SGN-U218495	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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