Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U568529 in the current build, Tomato 200607 #2

Unigene SGN-U329784

Unigene Basic Information

Unigene ID:	SGN-U329784
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	329784
mRNA sequence:	Length: 1291 bp

>SGN-U329784 Tomato 200607 #1 (3 members)
GATCCCCCGGGCTGCAGGGGGGTATCCAGGCTACAGGTGCTTATGTCAACGATGTCGTTAAGAAGGACAAAAGAAAAGGCTCTTACTGGT
TTGCCATCAAAATCTATCGAGACTTTTGTTGTGGAACTCTCTGGAGATGAAAGAGAAATTTATGATCAGATGGAATCAGAAGCTAAGAAG
ATTGTCAATCAATACATCTCTTCTGATAGTTCAATGAAAAATTATTGGACTGTGCTGAGTGTAATTGTACGACTTCGACAGATCTGTGTA
GATTCAGCGTTGTGTCCTGCAGATCTGAGATCTTTGCTTCCATCAAATAAAATTGGAGATGTGCAAAGCAACCCACAGTTGTTGGAAAAA
ATGCTCTCAGCGCTGCAAGATGACGAGGGCATTGATTGCCCAATCTGCATTTTTCCTCCTACCAATGGTGTCATTACTTGTTGTGGGCAT
ATTTTTTGCAAGTCATGCATTTTGAAGACCATAAAACGTGCCAAGGCTTGCTGCCCACTTTGCCGCCATCCTCTGACAGAGTCTGATCTA
TTTATCTGCCCACCTGAAGCATCTAATGCTGCAAATAGTGGAAGTTCATCCACTGCATCATCCAAAGTGATTGCACTCCTAAAACTTCTT
GTTGCATCAAGAGATGAAAGCCCTGGCAGAAAATCAATTGTGTTCTCTCAATTCAGGAAGTTTTTGCTCCTACTTGAAGAGCCGCTTAAA
GCAGCTGGTTTTAAGATATTGCGCTTAGACGGGTCAATGAATGCAAAAAAGAGATGCCAGGTCATTAAAGAGTTTGAAATCCCAGCTCCG
GAGGGGCCTACCATCTTGCTTGCAAGTCTAAAAGCTTCAGGTGCTGGAATAAATCTTACAGCTGCTTCTAGAGTCTATCTAATGGAACCT
TGGTGGAATCCCGCAGTTGAGGAGCAAGCTATGGACAGAGTCCATAGAATTGGACAGAAGGAAGATGTGAAGATTGTGAGGATGATTGCA
CGAAGCACCATTGGAGAACGGATACTGGAACTGCAGGAAAAGAAGAAACTGCTGGCGAGGAAGGCTTTTATGAAGAAGAGTTCACAAGAT
CAAAGGGAGATTAGTGTTAATGATCTTCGTACCTTGATGCACCTGTGAGTCACATTTTTATTCGTAGATGGATTTATATGTTTTGTAAAT
GCTTAACTTACTATACATCTGATCTTTTTGGTCAGAAATGCATCATGATGTTCTCTGTTTTGAATTATTTTGCTGAACTTGTGTAATGCA
TTTGGATGAAGATGGAATTAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 8 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101437	DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) SNF2-related - Molecular Function: DNA binding (GO:0003677) - Molecular Function: ATP binding (GO:0005524) Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524)	162
2	118854	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) SNF2-related - Molecular Function: DNA binding (GO:0003677) - Molecular Function: ATP binding (GO:0005524)	27
5	129365	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) SNF2-related - Molecular Function: DNA binding (GO:0003677) - Molecular Function: ATP binding (GO:0005524)	23

Preceding Unigenes (1)

Unigene	Build
SGN-U227021	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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