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Tomato locus anantha
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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| Registry name: | None | [Associate registry name] |
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| Image | Description | Type |
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Accessions and images (5)
Accessions and images (5)
| [Associate accession] |
Alleles (4)
Alleles (4)
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Associated loci (5)
Associated loci (5)
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Associated loci - graphical view
Associated loci - graphical view
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SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc02g081670.1 SL2.50ch02:45542385..45543752
ATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTTAAACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACTCAGGAGTTTGTTCTGTTGAAGGTTACTTGTTTGATCCTGATAATCTTTGTTGGTATAGGCTTTCTTTTGCTTTAATCCCACAAGGGTTTTCTCCTGTTTCATCTTCTGGTGGATTAATTTGCTTTGTTTCTGATGAATCTGGATCAAAAAACATTCTTTTATGTAATCCACTTGTAGGATCCATAATTCCCCTGCCTCCAACTTTAAGGCCTAGGCTTTTTCCTTCTATTGGTTTAACTATAACCAACACATCTATTGATATAGCTGTAGCTGGAGATGACTTGATATCACCTTATGCTGTTAAAAACTTAACTACAGAGTCATTTCATATTGATGGTAATGGATTTTACTCAATATGGGGTACAACTTCTACACTTCCAAGATTATGCAGTTTTGAATCAGGCAAAATGGTGCATGTACAGGGGAGATTTTATTGCATGAATTTTAGTCCTTTTAGTGTGCTTTCTTATGATATAGGGACTAATAACTGGTGCAAGATTCAAGCCCCGATGCGACGATTCCTACGTTCACCGAGCCTTGTTGAAGGGAATGGTAAGGTTGTTTTAGTTGCAGCAGTTGAAAAGAGTAAACTGAATGTGCCAAGAAGTTTGAGGCTTTGGGCATTGCAAGATTGTGGTACAATGTGGTTGGAAATAGAAAGAATGCCACAACAATTGTATGTGCAGTTTGCTGAAGTGGAGAATGGACAAGGGTTTAGTTGTGTTGGACATGGTGAATATGTGGTGATAATGATTAAGAATAATTCAGATAAGGCATTGTTGTTTGATTTCTGTAAGAAGAGATGGATTTGGATACCTCCTTGTCCATTTTTGGGAAATAATTTAGACTATGGTGGTGTTGGTAGTAGTAATAATTATTGTGGAGAATTTGGAGTTGGAGGGGGAGAGTTGCATGGATTTGGTTATGACCCTAGACTTGCTGCACCTATTGGTGCACTTCTTGATCAGTTGACATTGCCCTTTCAGTCATTCAACTGA
ATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTTAAACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACTCAGGAGTTTGTTCTGTTGAAGGTTACTTGTTTGATCCTGATAATCTTTGTTGGTATAGGCTTTCTTTTGCTTTAATCCCACAAGGGTTTTCTCCTGTTTCATCTTCTGGTGGATTAATTTGCTTTGTTTCTGATGAATCTGGATCAAAAAACATTCTTTTATGTAATCCACTTGTAGGATCCATAATTCCCCTGCCTCCAACTTTAAGGCCTAGGCTTTTTCCTTCTATTGGTTTAACTATAACCAACACATCTATTGATATAGCTGTAGCTGGAGATGACTTGATATCACCTTATGCTGTTAAAAACTTAACTACAGAGTCATTTCATATTGATGGTAATGGATTTTACTCAATATGGGGTACAACTTCTACACTTCCAAGATTATGCAGTTTTGAATCAGGCAAAATGGTGCATGTACAGGGGAGATTTTATTGCATGAATTTTAGTCCTTTTAGTGTGCTTTCTTATGATATAGGGACTAATAACTGGTGCAAGATTCAAGCCCCGATGCGACGATTCCTACGTTCACCGAGCCTTGTTGAAGGGAATGGTAAGGTTGTTTTAGTTGCAGCAGTTGAAAAGAGTAAACTGAATGTGCCAAGAAGTTTGAGGCTTTGGGCATTGCAAGATTGTGGTACAATGTGGTTGGAAATAGAAAGAATGCCACAACAATTGTATGTGCAGTTTGCTGAAGTGGAGAATGGACAAGGGTTTAGTTGTGTTGGACATGGTGAATATGTGGTGATAATGATTAAGAATAATTCAGATAAGGCATTGTTGTTTGATTTCTGTAAGAAGAGATGGATTTGGATACCTCCTTGTCCATTTTTGGGAAATAATTTAGACTATGGTGGTGTTGGTAGTAGTAATAATTATTGTGGAGAATTTGGAGTTGGAGGGGGAGAGTTGCATGGATTTGGTTATGACCCTAGACTTGCTGCACCTATTGGTGCACTTCTTGATCAGTTGACATTGCCCTTTCAGTCATTCAACTGA
| Download sequence region |
Get flanking sequences on SL2.50ch02
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mRNA Solyc02g081670.1.1
mRNA Solyc02g081670.1.1
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Ontology terms
Ontology terms
| terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc02g081670.1.1 Fimbriata (Fragment) (AHRD V1 **-- Q6QVW9_MIMLE); contains Interpro domain(s) IPR001810 Cyclin-like F-box
ATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTTAAACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACTCAGGAGTTTGTTCTGTTGAAGGTTACTTGTTTGATCCTGATAATCTTTGTTGGTATAGGCTTTCTTTTGCTTTAATCCCACAAGGGTTTTCTCCTGTTTCATCTTCTGGTGGATTAATTTGCTTTGTTTCTGATGAATCTGGATCAAAAAACATTCTTTTATGTAATCCACTTGTAGGATCCATAATTCCCCTGCCTCCAACTTTAAGGCCTAGGCTTTTTCCTTCTATTGGTTTAACTATAACCAACACATCTATTGATATAGCTGTAGCTGGAGATGACTTGATATCACCTTATGCTGTTAAAAACTTAACTACAGAGTCATTTCATATTGATGGTAATGGATTTTACTCAATATGGGGTACAACTTCTACACTTCCAAGATTATGCAGTTTTGAATCAGGCAAAATGGTGCATGTACAGGGGAGATTTTATTGCATGAATTTTAGTCCTTTTAGTGTGCTTTCTTATGATATAGGGACTAATAACTGGTGCAAGATTCAAGCCCCGATGCGACGATTCCTACGTTCACCGAGCCTTGTTGAAGGGAATGGTAAGGTTGTTTTAGTTGCAGCAGTTGAAAAGAGTAAACTGAATGTGCCAAGAAGTTTGAGGCTTTGGGCATTGCAAGATTGTGGTACAATGTGGTTGGAAATAGAAAGAATGCCACAACAATTGTATGTGCAGTTTGCTGAAGTGGAGAATGGACAAGGGTTTAGTTGTGTTGGACATGGTGAATATGTGGTGATAATGATTAAGAATAATTCAGATAAGGCATTGTTGTTTGATTTCTGTAAGAAGAGATGGATTTGGATACCTCCTTGTCCATTTTTGGGAAATAATTTAGACTATGGTGGTGTTGGTAGTAGTAATAATTATTGTGGAGAATTTGGAGTTGGAGGGGGAGAGTTGCATGGATTTGGTTATGACCCTAGACTTGCTGCACCTATTGGTGCACTTCTTGATCAGTTGACATTGCCCTTTCAGTCATTCAACTGA
ATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTTAAACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACTCAGGAGTTTGTTCTGTTGAAGGTTACTTGTTTGATCCTGATAATCTTTGTTGGTATAGGCTTTCTTTTGCTTTAATCCCACAAGGGTTTTCTCCTGTTTCATCTTCTGGTGGATTAATTTGCTTTGTTTCTGATGAATCTGGATCAAAAAACATTCTTTTATGTAATCCACTTGTAGGATCCATAATTCCCCTGCCTCCAACTTTAAGGCCTAGGCTTTTTCCTTCTATTGGTTTAACTATAACCAACACATCTATTGATATAGCTGTAGCTGGAGATGACTTGATATCACCTTATGCTGTTAAAAACTTAACTACAGAGTCATTTCATATTGATGGTAATGGATTTTACTCAATATGGGGTACAACTTCTACACTTCCAAGATTATGCAGTTTTGAATCAGGCAAAATGGTGCATGTACAGGGGAGATTTTATTGCATGAATTTTAGTCCTTTTAGTGTGCTTTCTTATGATATAGGGACTAATAACTGGTGCAAGATTCAAGCCCCGATGCGACGATTCCTACGTTCACCGAGCCTTGTTGAAGGGAATGGTAAGGTTGTTTTAGTTGCAGCAGTTGAAAAGAGTAAACTGAATGTGCCAAGAAGTTTGAGGCTTTGGGCATTGCAAGATTGTGGTACAATGTGGTTGGAAATAGAAAGAATGCCACAACAATTGTATGTGCAGTTTGCTGAAGTGGAGAATGGACAAGGGTTTAGTTGTGTTGGACATGGTGAATATGTGGTGATAATGATTAAGAATAATTCAGATAAGGCATTGTTGTTTGATTTCTGTAAGAAGAGATGGATTTGGATACCTCCTTGTCCATTTTTGGGAAATAATTTAGACTATGGTGGTGTTGGTAGTAGTAATAATTATTGTGGAGAATTTGGAGTTGGAGGGGGAGAGTTGCATGGATTTGGTTATGACCCTAGACTTGCTGCACCTATTGGTGCACTTCTTGATCAGTTGACATTGCCCTTTCAGTCATTCAACTGA
Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc02g081670.1.1 Fimbriata (Fragment) (AHRD V1 **-- Q6QVW9_MIMLE); contains Interpro domain(s) IPR001810 Cyclin-like F-box
MEAFHHPPISFHFPYAFPIPTPTTNFLGTPNSSSVNGMIINTWMDSRIWSRLPHRLIDRIIAFLPPPAFFRARVVCKRFYGLIYSTHFLELYLQVSPKRNWFIFFKQKVPRNNIYKNVMNSSNSGVCSVEGYLFDPDNLCWYRLSFALIPQGFSPVSSSGGLICFVSDESGSKNILLCNPLVGSIIPLPPTLRPRLFPSIGLTITNTSIDIAVAGDDLISPYAVKNLTTESFHIDGNGFYSIWGTTSTLPRLCSFESGKMVHVQGRFYCMNFSPFSVLSYDIGTNNWCKIQAPMRRFLRSPSLVEGNGKVVLVAAVEKSKLNVPRSLRLWALQDCGTMWLEIERMPQQLYVQFAEVENGQGFSCVGHGEYVVIMIKNNSDKALLFDFCKKRWIWIPPCPFLGNNLDYGGVGSSNNYCGEFGVGGGELHGFGYDPRLAAPIGALLDQLTLPFQSFN*
MEAFHHPPISFHFPYAFPIPTPTTNFLGTPNSSSVNGMIINTWMDSRIWSRLPHRLIDRIIAFLPPPAFFRARVVCKRFYGLIYSTHFLELYLQVSPKRNWFIFFKQKVPRNNIYKNVMNSSNSGVCSVEGYLFDPDNLCWYRLSFALIPQGFSPVSSSGGLICFVSDESGSKNILLCNPLVGSIIPLPPTLRPRLFPSIGLTITNTSIDIAVAGDDLISPYAVKNLTTESFHIDGNGFYSIWGTTSTLPRLCSFESGKMVHVQGRFYCMNFSPFSVLSYDIGTNNWCKIQAPMRRFLRSPSLVEGNGKVVLVAAVEKSKLNVPRSLRLWALQDCGTMWLEIERMPQQLYVQFAEVENGQGFSCVGHGEYVVIMIKNNSDKALLFDFCKKRWIWIPPCPFLGNNLDYGGVGSSNNYCGEFGVGGGELHGFGYDPRLAAPIGALLDQLTLPFQSFN*
Gene model matches
Gene model matches
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SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
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GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
| Other genome matches | None |
Literature annotations [4]
Literature annotations [4]
| [Associate publication] [Matching publications] |
The tomato 66.3-kD polyphenoloxidase gene: molecular identification and developmental expression.
The Plant cell (1992)
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A gene coding for a polypeptide abundant in tomato floral meristems was isolated and shown to represent a tomato 66.3-kD polyphenoloxidase. Analysis of cDNA clones and a corresponding intronless genomic clone indicated that the plastid-bound 587-residue-long polypeptide, designated P2, contains two conserved copper-binding domains, similar to those found in fungal and mammalian tyrosinases. P2 transcripts and polypeptides are accumulated in the arrested floral primordia of the anantha mutant inflorescences and are equally abundant in primordia of wild-type flowers; the gene continues to be expressed at high levels in developing floral organs. In young expanding leaves, P2 protein is concentrated in palisade cells and in epidermal trichomes. Expression patterns of P2 in plant meristems permit molecular distinction between floral and vegetative primordia, and, in a companion study, comparison with dUTPase suggests that the two genes mark two alternative complementary developmental programs in the floral and vegetative meristems of the tomato plants.
Shahar, T. Hennig, N. Gutfinger, T. Hareven, D. Lifschitz, E.
The Plant cell.
1992.
4(2).
135-47.
Patterning of inflorescences and flowers by the F-Box protein DOUBLE TOP and the LEAFY homolog ABERRANT LEAF AND FLOWER of petunia.
The Plant cell (2008)
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Angiosperms display a wide variety of inflorescence architectures differing in the positions where flowers or branches arise. The expression of floral meristem identity (FMI) genes determines when and where flowers are formed. In Arabidopsis thaliana, this is regulated via transcription of LEAFY (LFY), which encodes a transcription factor that promotes FMI. We found that this is regulated in petunia (Petunia hybrida) via transcription of a distinct gene, DOUBLE TOP (DOT), a homolog of UNUSUAL FLORAL ORGANS (UFO) from Arabidopsis. Mutation of DOT or its tomato (Solanum lycopersicum) homolog ANANTHA abolishes FMI. Ubiquitous expression of DOT or UFO in petunia causes very early flowering and transforms the inflorescence into a solitary flower and leaves into petals. Ectopic expression of DOT or UFO together with LFY or its homolog ABERRANT LEAF AND FLOWER (ALF) in petunia seedlings activates genes required for identity or outgrowth of organ primordia. DOT interacts physically with ALF, suggesting that it activates ALF by a posttranslational mechanism. Our findings suggest a wider role than previously thought for DOT and UFO in the patterning of flowers and indicate that the different roles of LFY and UFO homologs in the spatiotemporal control of floral identity in distinct species result from their divergent expression patterns.
Souer, E. Rebocho, AB. Bliek, M. Kusters, E. de Bruin, RA. Koes, R.
The Plant cell.
2008.
20(8).
2033-48.
The Making of a Compound Inflorescence in Tomato and Related Nightshades.
PLoS biology (2008)
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Variation in the branching of plant inflorescences determines flower number and, consequently, reproductive success and crop yield. Nightshade (Solanaceae) species are models for a widespread, yet poorly understood, program of eudicot growth, where short side branches are initiated upon floral termination. This "sympodial" program produces the few-flowered tomato inflorescence, but the classical mutants compound inflorescence (s) and anantha (an) are highly branched, and s bears hundreds of flowers. Here we show that S and AN, which encode a homeobox transcription factor and an F-box protein, respectively, control inflorescence architecture by promoting successive stages in the progression of an inflorescence meristem to floral specification. S and AN are sequentially expressed during this gradual phase transition, and the loss of either gene delays flower formation, resulting in additional branching. Independently arisen alleles of s account for inflorescence variation among domesticated tomatoes, and an stimulates branching in pepper plants that normally have solitary flowers. Our results suggest that variation of Solanaceae inflorescences is modulated through temporal changes in the acquisition of floral fate, providing a flexible evolutionary mechanism to elaborate sympodial inflorescence shoots.
Lippman, ZB. Cohen, O. Alvarez, JP. Abu-Abied, M. Pekker, I. Paran, I. Eshed, Y. Zamir, D.
PLoS biology.
2008.
6(11).
e288.
Synchronization of the flowering transition by the tomato TERMINATING FLOWER gene.
Nature genetics (2012)
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The transition to flowering is a major determinant of plant architecture, and variation in the timing of flowering can have profound effects on inflorescence architecture, flower production and yield. Here, we show that the tomato mutant terminating flower (tmf) flowers early and converts the multiflowered inflorescence into a solitary flower as a result of precocious activation of a conserved floral specification complex encoded by ANANTHA (AN) and FALSIFLORA (FA). Without TMF, the coordinated flowering process is disrupted, causing floral identity genes, such as AN and members of the SEPALLATA (SEP) family, to activate precociously, while the expression of flowering transition genes, such as FRUITFULL (FUL), is delayed. Indeed, driving AN expression precociously is sufficient to cause early flowering, and this expression transforms multiflowered inflorescences into normal solitary flowers resembling those of the Solanaceae species petunia and tobacco. Thus, by timing AN activation, TMF synchronizes flower formation with the gradual reproductive transition, which, in turn, has a key role in determining simple versus complex inflorescences.
Macalister, CA. Park, SJ. Jiang, K. Marcel, F. Bendahmane, A. Izkovich, Y. Eshed, Y. Lippman, ZB.
Nature genetics.
2012.
().
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Ontology annotations (2)
Ontology annotations (2)
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