Clone slm-44a9

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Clone
Clone name
slm-44a9
SL_MboI0044A09
C01SLm0044A09
Clone type
BAC
Contamination
none
Estimated length
90,056
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pECBAC1
Accession
Heinz 1706
Restriction enzyme
MboI
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 1 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 1
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'manual'
Full Sequence
99,464 bp
C01SLm0044A09.1
AC242495.3 (GenBank) 		[View]
End Sequences
Warnings
none
FTP
Chromosome 1 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (25)
1015, 1026, 1250, 1320, 1741, 1954, 2052, 2131, 2300, 2374, 2530, 2860, 2984, 3253, 3334, 3594, 4425, 4633, 4927, 5097, 5309, 5733, 7680, 7920, 8614
HindIII in silico (26)
1004, 1233, 1285, 1307, 1729, 1926, 2022, 2130, 2327, 2407, 2561, 2846, 2989, 3232, 3340, 3582, 4364, 4414, 4627, 4895, 5137, 5300, 5394, 5781, 7601, 8371
Fragment Lengths Match Score
0.97
Annotations  
Browse
SL_MboI0044A09 has no browsable sequence annotations
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temporarily unavailable
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 More Criteria

Seq. Center Reported Status
Estimated Length
 and  bp
GenBank Accession (version insensitive)
e.g. AP009318.1 or AP009318
Sequencing on Chromosome
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Annotations
End Sequences

e.g. crystallin
Overgo match to marker what's this?
Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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