Clone hba-219g5

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Clone
Clone name
hba-219g5
LE_HBa0219G05
C01HBa0219G05
P219G05
Clone type
BAC
Contamination
none
Estimated length
91,253
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 1 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 1
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'manual'
Full Sequence
136,400 bp
C01HBa0219G05.1
AC240198.1 (GenBank) 		[View]
End Sequences
Warnings
  • sequence length 136,400 is 49.5% different from estimated length 91,253
 FTP
Chromosome 1 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (22)
1105, 1570, 1654, 1799, 1799, 1911, 2234, 2329, 2442, 2724, 2835, 3553, 3732, 4367, 4952, 4952, 6205, 6359, 7066, 8941, 8941, 9783
HindIII in silico (33)
1091, 1096, 1098, 1193, 1238, 1571, 1581, 1645, 1766, 1777, 1812, 1895, 2224, 2262, 2356, 2464, 2731, 2824, 3776, 4357, 4733, 4849, 5919, 6003, 6011, 6211, 6215, 6259, 7064, 7123, 7391, 9067, 9788
Fragment Lengths Match Score
0.82
Annotations  
Browse
LE_HBa0219G05 has no browsable sequence annotations
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Seq. Center Reported Status
Estimated Length
 and  bp
GenBank Accession (version insensitive)
e.g. AP009318.1 or AP009318
Sequencing on Chromosome
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Annotations
End Sequences

e.g. crystallin
Overgo match to marker what's this?
Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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