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Here we report a serious problem with tobacco gene models. We tried to map the gene models of Nitociana tabacum (TN90), which you provide in your ftp, to the TN90 genome assembly sequences. Unfortunately, a lot of gene models could not be mapped. Of the 122388 gene models you provided in the gene model file,only 53714 could be mapped to the genome assembly. We do not know what method you used to identify gene models. Could you check all the datasets of the three tobacco varieties(TN90, K326 and Bathma)? Thank you.
This topic was started by Peng Wang.
Here we report a serious problem with tobacco gene models. We tried to map the gene models of Nitociana tabacum (TN90), which you provide in your ftp, to the TN90 genome assembly sequences. Unfortunately, a lot of gene models could not be mapped. Of the 122388 gene models you provided in the gene model file,only 53714 could be mapped to the genome assembly. We do not know what method you used to identify gene models. Could you check all the datasets of the three tobacco varieties(TN90, K326 and Bathma)? Thank you.
This topic was started by Peng Wang.
Posted by Tony Adams on 2023-08-09 07:34:04
This issue be addressed as soon as possible to ensure timely resolution and accurate gene model mapping for the tobacco varieties. https://fnf2.io/
This issue be addressed as soon as possible to ensure timely resolution and accurate gene model mapping for the tobacco varieties. https://fnf2.io/
Posted by Peter Kyle on 2023-08-12 19:04:58
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Posted by Peter Kyle on 2023-08-12 19:04:58
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