This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.
Tomato locus Argonaute2a
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
[loading edit links...]
|
[loading...]
|
|
 Links to external databases
 Links to external databases
|
| Registry name: | None | [Associate registry name] |
| Notes and figures (0)
Notes and figures (0)
| [Add notes, figures or images] |
Success
The display image was set successfully.
| Image | Description | Type |
|---|
| Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
Accession name:
Would you Like to specify an allele?
| Alleles (0) | None | [Add new Allele] |
| Associated loci (18)
Associated loci (18)
| [Associate new locus] |
[loading...]
|
| Associated loci - graphical view
Associated loci - graphical view
| View Argonaute2a relationships in the stand-alone network browser |
[loading...] | [Legend] [Levels] |
| SolCyc links
SolCyc links
|
[loading...]
| Sequence annotations
Sequence annotations
|
| Genome features
Genome features
|
| Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc02g069260.2 SL2.50ch02:39204297..39211055
ATGGATCGTGGGAACTACCGACGTGGTGGCGGTCATGATAACGCCGGCAGAGGTGGAGGTAACCGTGGTCGAGGACAAGGCCGTGGTGGTGGAAGGGGTGAGCCTCAGATCGGAGGTGGAAGGGGTGGGACCCACATCGGTGGTGGGTCCCAAATGGGTCAGCCTCCACAGCAATGGGGGAATCAGCCGAGGGGATCGGGTCAATACCAGATTCGTGGTGGGGCTCCGCAAAATCAACCGGGTCAAAACTATCCGGTTAATCAGAATCCGGGTCGTGGTGGTACTTGGGTAAACCAACCGGTTCAACGTGGTGGTGGTGGTGGGGGTAGCGCTTGGCCACGGCCACAACAGCAGGGTAGTGGCGTTCCAAACACTACTTGGCCCCGACCACCACCGCAGCAACAGGGTAGTGGTAGTGGAGTTGCTAATGCTTGGGCCCGGCCACCGCCGCAGAGGAGTCAGCAGCATGGTGGTGGAAATCAGCAGCAGGTTGTGGATCGTTCTCCTCCTCAATCTTCTGGTATTAACTCAACCTTGTTTTCTTGTTATTATTATTGTTATCTATTTTCTTTGTTTTATACTAATTATCTACTGCAAGTTAATATATGGATATGCAATTTTTTTAACTTTTAACAATTTTGAATATATTAACTTTCAATTTAAAATATCTTATTAGTATAATTTAATTTAACTTTAATAATTAATTAAATTGATCGTTGAAAATCGCAACATTCCCGATCAAAAGGGATAAAAGGAGTAGTAGTTTTAGCACACGTGTGGCTCACCTTATTTTTAATAAATTCATTAGAAAAATAAAGTTCTATGGAAAAAACATGCCTGTGCAGTGAGTAATAGAATGCAACTTAGATTGAATCTTTAAAAGTATATTAAGAAATACCAAATGAGGGGCGTATTCTAATGTTTAGAATTGATTCCTCTTTAAGCAATCTATTGTAAATTAGTAGCTTAGTTGGTTAACTATTCCAACTCCGACCTTGTTGACGAGGATTTGATTCACCATATTGTAATTATAATTATTTCTCATTTTCCCTTCTCCGACCCATTTTTTTTAAAACTATTAATTTTGAGATTCAATTACTAGTTAGCAAACTTTCAATAAGGTCACAAATGGAATAAAACATACACATTCTTCTTTAAACTTTTATAATACTAGCAATATAGTAAAAATACATAATAAATGCATAATTTCGCTTGCCCATTTTTTCCTCCAACCAATAAAAAATTAATAGTTTTTTCATTGAGTCACATTAAAGCATAAATCAAATAGTACAATGATGATATAAGTGCTTCATTATTTGAAATATATGATGAAAAGATAATCTTGACCTTGAGTAGGGCATTAATTCATGAAACTAAAAAGATCAATTTATATAGATTAAGATGGAGGAATACCAAAATATATTTTAAAGTTTTAGATTAAGTAGTTGGAGGTTATGAGTTTGGATAGTGTGAGAGTTCTGAATATCTAAGAACAACTATTGAATAGCTAATTAGATAGCATGAGTTATGAAAGTAAATGTTTAAAACAAATGAAGGAGGACAATAATACTCCATTTTCAGAATAATATTTTTGTAAGGGATAAGATGAAAATGTAACATGTTTTATTTTCTATCCAATTTTGAGAAGGTTATTTTTTTTAAAGAAGGTTCTATTTTCTATCTAATTGGTTCTACAGTTATAATGATCCCATCTTATAGACTTTACTTGAAAATCATTCACTTAGATAGGGGTTTATTTAAGATCTATTAAAAGCTTATTAATAAATATGATGATGGTAGAGATGCTTCTTCTTCTTCCAATTCAAAGAATATCAAAGGTTGAAAAATAATAATTGTTCTTTATCCTCGAAAAACTAATTGTTCTTTAAATAAAGAACAAAAAGAATATTATATTAAGTTTGTTATAAAAGATTATACAAAGTGCAAAACAAAAAAGTACAAGAAGATCACAATATTGATGTTGTTAAACAATATTCATAATTCAATTTTTGACTTCACACCTTTGCAATTTTAGCATTTAGTATATATAGTTGAATATAATATGATATCATTACTATTCAGTAATATTTAACTAATTAGGTGTTCCATAATATTATGATTTAGTATCGAGTTAACTTTGCACTTTGGAGCTTCCCACTTTGAATATGAATAATGAACGAATAATGATAATGTGTGCGTGTGTGTTTCTATGTATACACACACGTATTCACATATATATACATATTATCTTATTTTGTTTTGTTTCAGTTTTAAAATAATTATTTTTCATCTACAAGTGCTTATTATGGAGCAGACCTGGATTATCTTTTTGTTTTCACCCTCTTAATTTGGAGAATCTTGATATCTGCTTTCATCTAGGAAAAAACTAGACTATTTTGAATAATGGTATTTATTGGTTTGTATTTGGCTTTGTTCTTCAGCTACATTGGTCATACTGTTTTAATAAGTACTCATCAGTTTTGAGGCTTCTTCTTGTGTTACTAATGTGTTGGGGATTTGATATAACCAACAAAAGTTCGAAATCCGTTAGTTGTGGTGGTTTGACTCATTTTTCTTTCTAGCTCACAAGTTTGGCATAATACATAAATGTGCCCTTTAATTTGGCTTCAAATTACATTTATGCTCTTCAACTTTGGATATGCACACATAGACATTTAAACTTGTATAAAGTTGAACAAATTGACACACATGTCCCACATGTCATCCTACATGTCATTTTTTGTCCTACTTGTATTGTTCCATGTAGGATTCATGTGTTTATTTATCTAAAAGTTGGATAGTTAAAGTGTCGATTTTTGCATTAGGAAAGTTGGAGGTCAAAATTAAAATTTGAATCCAAGTTTAGGGTCCAATAACTGTATCTTTAGTTTTCTGCAAATAACATATTATGTCATAAATGATTTATTCCTACGTTGCGTGTTCTTTCATTTTATTGGTGCACAAGTACACCAATGTTAAATGCGCTGTATTTTTGTGGGCAGATCCTGTTCAAGTTGATCTGGGGTCCCTGAAAATTACAGATCAGAGTCCATCATCTCGACAAGAAAGTTCCAAGGAAAAACGTGTACCTATTGCACGACCTGATACTGGAAAAATTGCTGTCAAGTCAATTGCGCTGCTTGCTAATCATTTTCCTGTTAGATTTAATCCCCAGTCTACCATTATGCATTATGATGTGGATATTCAACAGAGGGCTGATGGGAATCGGCCTGTGAAGAAGCTAACAAACAAGTCTGTTCTCCATATGATAAGAGAAAAGCTGTGTGCGGATGACCCTACACGATTTCCCCTAGATAAAACTGCATATGACGGTAAGAAGAACATTTTCAGTGCTGTTCAACTTCCTACTGGGTGTTTTGCTGTGAACTGGTCTGACGGGGAAGATGCTAGGTTACGCTCTTATGACATTACCATCAAGCTTGTTGCTGAATTAAAACTTTGCAAGTTGAAAGAATATTTGAGTGGAAGCCTATCACATATTCCTCGTGATATACTACAAGGAATGGAGTTGGTTATGAAAGAAAATCCTACTAGGTGCAGGACTTCTGTAGGTCGTTGTTTCTACTCTAATGAGCACCTGCCCGACCATGACTTTCGTTTTGGTGTTGCTGCATATAGAGGTTTTCAACAGAGCCTAAAGCCTACAAAAGGAGGGCTTGCGTTGTGCTTAGATTACTCGGTCTTGGCACTCCGGAAACCAATGCCAGTGCTAGACTTTCTGAAGGAATATTTAGGAGAATCTAACGAAAATACCTTCAGGAACAACATTCGAGCTGCAAAGGGTGCATTGGTTGGTTTGAAAGTCAGGGTAATTCATCGTCGTACAAGCCAGAAGTTTCTTATTAAGCAGCTAACTGACTGCAAGACTCGTGAAATTACTTTTCCCCTTGAAGATCCCGAAGGCATAAATCCCCCGAGGGATGTTCTTCTTGTTGACTACTTCAGGGATAAATATCAGCGCGAGATTCAGTTCAAGGATTTTCCTTCATTAGATATTGGAAAAGGTAATAAGAAAAACTATGTCCCGATGGAATTCTGTGTCTTGGTTGAGGGACAACGGTATCCCAAGGAGGATTTGGATAAAGATACTGCCTTGTTTCTGAAGAACATATCACTAGCTCGACCCCAAGATAGAAGGCAGGCAATTTGTGAAATGGTACGGGCTGGAGATGGGCCGTGCGGGTATGTGAATTCCTTAAATTTTGTCTTATTCATCTGAGATTTTGTTGTTTCCTCTTGAATTTCTTCTTTTTGACAAGAAGTATGTGGTTTTTGATACATGTGTCAGTTATTGGTGGATTTGAGTTTTTAAGCTGATGAATCAGTCTATGCTGCCTTAGTATGAATGATTTTGGTTGATCAATTTGTGGGGTTTGTTTATTTTTAAATGAAAGATTTATGGGGTTTTGTGGAACTAGAGAGATGACTTGCATCTACAATCGAAAGAGAAGAAAACAAAAAAAGCTAGATTTTATGTGAAATATCAGGAGGTTTGTTTCTGTTTGTGATTTTATTGTCTTTCATGTGTGTTATGGAATTGATTGTGGATGTGATATATTTTCTGTTATACTTGTGCTATCTTCTCTGGAAATTTCAAAGTTTTCTACTCAGCAATCTCTTCTCTGTTAGACATTATCATTAGAATTCGAATGGTATTTTATGGTAAGCTGCCTTTTGGGCTCTTCCTATGTCTGTCTTGCTATCGTTGTGTCTGTTCCAGATTTCAAGGGCTTGTTCTTCTTGATGTTGTTGTCATTTGAGTCGAGAGTCTTTCGTAGACAGCCTCTCTACCTCCACGAGATAGTGGTGTTAGGTCTGTGTACGACTCCACCTTCCTTAAACTCCATTTATGGAATGTATTGTTGTTTGAATCATGAATTTGTTGGTAGATATACTGATACAAGTTTTTAGCATTTTTTGTTAGAGACTTTCATTTTTCCTTCTAAGTTTCAATTGATTATTGCAGGGCTGTCACCCGCAATTTTGATATTGGAGTTGATAGGAACATGACCCGTGTTCCGGGTCGTATTCTTCCTCCCCCTGATTTGAAGCTAGGCGGTCAAAATCGACTTCCTGTGAATGATAAATGCCAGTGGAACCTTGTTGGGAAATCTGTGGTGGAAGGCAAGGCGCTTCAGCGATGGGCTTTGATAGATTTTAGCGCTCAGGATCGCAAACCCTTCTTTAGGCTACGAGTTGATGAATTTGTCTTCAGATTGAAAGATCGGTGCAGAAAATTGAGTATTAATATGGAAGAACCTGCTGTAGTACATTTCACTGACATGCATGTACTCTCTGAAGTTGGCAAGGTTCATAAACTTCTCGATGGTGTGGTTAATGCAGCTAAACGGGAAATCAATGGTAAACTTCAAATGATAGTTTGTGTTATGACATCAAAGCATAATGGGTACAAATATCTTAAATGGGTATCTGAGACACAAATTGGCGTAGTAACCCAGTGTTGCTTGTCTACTAATGCCAACAAGGGACAGGATCAATATCTTGCAAACCTGTGTATGAAGATCAATGCAAAACTTGGGGGCAGCAATATGGAACTTATGGATAGACTCCCTAATTTTGGAAGAGAAGACAATGTCATGTTCATTGGAGCTGATGTTAATCATCCTGCTGCAAAGAATGTGACATGTCCATCCATAGCAGCCGTTGTTGCCACCGTCAACTGGCCAGCTGCTAATAGATATGCTGCTAGAGTTTGTCCTCAGGTTCACAGGACTGAGAAGATTCTAGAGTTTGGAAAGATGTGTGCAGACCTAGTTCATACTTATAAGGAAATCAACTCTGTTAAACCAAACAAAATTGTTGTTTTCCGTGATGGTGTGAGTGAGGGTCAGTTTGATATGGTACTCAACGAAGAGTTGCTTGATTTGGCGAAGGCTATATACGACAGTAACTATCAACCAGCAATTACTCTTGTTGTGGCTCAGAAGAGACACCATACACGGCTATTTCCTGAGGGTGGCCCTGCCAATGTGCCTCCTGGTACTGTTGTGGATACAATAATTGTTCATCCCTCTGATTTTGACTTCTATCTTTGCAGCCACTTTGGAGGGTTGGGTACCAGCAAGCCAACTCACTATCATGTTCTATGGGATGATAATGGTTTCAATTCTGACAGCTTACAAAAGCTTATATACAACATGTGTTTCACTTTTGCGCGGTGCACTAAACCTGTCTCACTTGTTCCACCAGTTTACTATGCAGACCTTGTTGCTTATAGGGGACGGATGTTTCAAGAGGTGCTTATGGAGATGAACTCTCCTAGCTCTGCAACTTCATCTTCTCCAACTGCCTCATTTCAACAAAAATTTTATGATTTGCACTCTGATTTGCAGAACGTAATGTTTTTCGTCTGATGCCACCTTGTTGATCTCCTTCACCATTCCCACACTGGGGAGGGAGATACGGTTGTCTACATTTTGGAGATGCCCATTTCCAAACGCATTTGAACCTCCTTTCCGTTGGACATTGCAAAGGAGTTTGTGCGTGAATCTAATGGGGTTTCATGCTTCTTTTACTTTTCTATTGTGTGAGTTTAATCATTGACGTTTGATTGTGTTTTATCTGCTTTGGGGGGTCTCTGGAGGCCACTCCCAAATATGTCTACTGCTTAAATTGTGTGATGTTTTGTATTATGTATTTCTGAGACGTGTCTTAATATTAATATATTTGTGTTTGAGCTATTTGATGTCTATCTATCACTCATTCAATGTTATTGCA
ATGGATCGTGGGAACTACCGACGTGGTGGCGGTCATGATAACGCCGGCAGAGGTGGAGGTAACCGTGGTCGAGGACAAGGCCGTGGTGGTGGAAGGGGTGAGCCTCAGATCGGAGGTGGAAGGGGTGGGACCCACATCGGTGGTGGGTCCCAAATGGGTCAGCCTCCACAGCAATGGGGGAATCAGCCGAGGGGATCGGGTCAATACCAGATTCGTGGTGGGGCTCCGCAAAATCAACCGGGTCAAAACTATCCGGTTAATCAGAATCCGGGTCGTGGTGGTACTTGGGTAAACCAACCGGTTCAACGTGGTGGTGGTGGTGGGGGTAGCGCTTGGCCACGGCCACAACAGCAGGGTAGTGGCGTTCCAAACACTACTTGGCCCCGACCACCACCGCAGCAACAGGGTAGTGGTAGTGGAGTTGCTAATGCTTGGGCCCGGCCACCGCCGCAGAGGAGTCAGCAGCATGGTGGTGGAAATCAGCAGCAGGTTGTGGATCGTTCTCCTCCTCAATCTTCTGGTATTAACTCAACCTTGTTTTCTTGTTATTATTATTGTTATCTATTTTCTTTGTTTTATACTAATTATCTACTGCAAGTTAATATATGGATATGCAATTTTTTTAACTTTTAACAATTTTGAATATATTAACTTTCAATTTAAAATATCTTATTAGTATAATTTAATTTAACTTTAATAATTAATTAAATTGATCGTTGAAAATCGCAACATTCCCGATCAAAAGGGATAAAAGGAGTAGTAGTTTTAGCACACGTGTGGCTCACCTTATTTTTAATAAATTCATTAGAAAAATAAAGTTCTATGGAAAAAACATGCCTGTGCAGTGAGTAATAGAATGCAACTTAGATTGAATCTTTAAAAGTATATTAAGAAATACCAAATGAGGGGCGTATTCTAATGTTTAGAATTGATTCCTCTTTAAGCAATCTATTGTAAATTAGTAGCTTAGTTGGTTAACTATTCCAACTCCGACCTTGTTGACGAGGATTTGATTCACCATATTGTAATTATAATTATTTCTCATTTTCCCTTCTCCGACCCATTTTTTTTAAAACTATTAATTTTGAGATTCAATTACTAGTTAGCAAACTTTCAATAAGGTCACAAATGGAATAAAACATACACATTCTTCTTTAAACTTTTATAATACTAGCAATATAGTAAAAATACATAATAAATGCATAATTTCGCTTGCCCATTTTTTCCTCCAACCAATAAAAAATTAATAGTTTTTTCATTGAGTCACATTAAAGCATAAATCAAATAGTACAATGATGATATAAGTGCTTCATTATTTGAAATATATGATGAAAAGATAATCTTGACCTTGAGTAGGGCATTAATTCATGAAACTAAAAAGATCAATTTATATAGATTAAGATGGAGGAATACCAAAATATATTTTAAAGTTTTAGATTAAGTAGTTGGAGGTTATGAGTTTGGATAGTGTGAGAGTTCTGAATATCTAAGAACAACTATTGAATAGCTAATTAGATAGCATGAGTTATGAAAGTAAATGTTTAAAACAAATGAAGGAGGACAATAATACTCCATTTTCAGAATAATATTTTTGTAAGGGATAAGATGAAAATGTAACATGTTTTATTTTCTATCCAATTTTGAGAAGGTTATTTTTTTTAAAGAAGGTTCTATTTTCTATCTAATTGGTTCTACAGTTATAATGATCCCATCTTATAGACTTTACTTGAAAATCATTCACTTAGATAGGGGTTTATTTAAGATCTATTAAAAGCTTATTAATAAATATGATGATGGTAGAGATGCTTCTTCTTCTTCCAATTCAAAGAATATCAAAGGTTGAAAAATAATAATTGTTCTTTATCCTCGAAAAACTAATTGTTCTTTAAATAAAGAACAAAAAGAATATTATATTAAGTTTGTTATAAAAGATTATACAAAGTGCAAAACAAAAAAGTACAAGAAGATCACAATATTGATGTTGTTAAACAATATTCATAATTCAATTTTTGACTTCACACCTTTGCAATTTTAGCATTTAGTATATATAGTTGAATATAATATGATATCATTACTATTCAGTAATATTTAACTAATTAGGTGTTCCATAATATTATGATTTAGTATCGAGTTAACTTTGCACTTTGGAGCTTCCCACTTTGAATATGAATAATGAACGAATAATGATAATGTGTGCGTGTGTGTTTCTATGTATACACACACGTATTCACATATATATACATATTATCTTATTTTGTTTTGTTTCAGTTTTAAAATAATTATTTTTCATCTACAAGTGCTTATTATGGAGCAGACCTGGATTATCTTTTTGTTTTCACCCTCTTAATTTGGAGAATCTTGATATCTGCTTTCATCTAGGAAAAAACTAGACTATTTTGAATAATGGTATTTATTGGTTTGTATTTGGCTTTGTTCTTCAGCTACATTGGTCATACTGTTTTAATAAGTACTCATCAGTTTTGAGGCTTCTTCTTGTGTTACTAATGTGTTGGGGATTTGATATAACCAACAAAAGTTCGAAATCCGTTAGTTGTGGTGGTTTGACTCATTTTTCTTTCTAGCTCACAAGTTTGGCATAATACATAAATGTGCCCTTTAATTTGGCTTCAAATTACATTTATGCTCTTCAACTTTGGATATGCACACATAGACATTTAAACTTGTATAAAGTTGAACAAATTGACACACATGTCCCACATGTCATCCTACATGTCATTTTTTGTCCTACTTGTATTGTTCCATGTAGGATTCATGTGTTTATTTATCTAAAAGTTGGATAGTTAAAGTGTCGATTTTTGCATTAGGAAAGTTGGAGGTCAAAATTAAAATTTGAATCCAAGTTTAGGGTCCAATAACTGTATCTTTAGTTTTCTGCAAATAACATATTATGTCATAAATGATTTATTCCTACGTTGCGTGTTCTTTCATTTTATTGGTGCACAAGTACACCAATGTTAAATGCGCTGTATTTTTGTGGGCAGATCCTGTTCAAGTTGATCTGGGGTCCCTGAAAATTACAGATCAGAGTCCATCATCTCGACAAGAAAGTTCCAAGGAAAAACGTGTACCTATTGCACGACCTGATACTGGAAAAATTGCTGTCAAGTCAATTGCGCTGCTTGCTAATCATTTTCCTGTTAGATTTAATCCCCAGTCTACCATTATGCATTATGATGTGGATATTCAACAGAGGGCTGATGGGAATCGGCCTGTGAAGAAGCTAACAAACAAGTCTGTTCTCCATATGATAAGAGAAAAGCTGTGTGCGGATGACCCTACACGATTTCCCCTAGATAAAACTGCATATGACGGTAAGAAGAACATTTTCAGTGCTGTTCAACTTCCTACTGGGTGTTTTGCTGTGAACTGGTCTGACGGGGAAGATGCTAGGTTACGCTCTTATGACATTACCATCAAGCTTGTTGCTGAATTAAAACTTTGCAAGTTGAAAGAATATTTGAGTGGAAGCCTATCACATATTCCTCGTGATATACTACAAGGAATGGAGTTGGTTATGAAAGAAAATCCTACTAGGTGCAGGACTTCTGTAGGTCGTTGTTTCTACTCTAATGAGCACCTGCCCGACCATGACTTTCGTTTTGGTGTTGCTGCATATAGAGGTTTTCAACAGAGCCTAAAGCCTACAAAAGGAGGGCTTGCGTTGTGCTTAGATTACTCGGTCTTGGCACTCCGGAAACCAATGCCAGTGCTAGACTTTCTGAAGGAATATTTAGGAGAATCTAACGAAAATACCTTCAGGAACAACATTCGAGCTGCAAAGGGTGCATTGGTTGGTTTGAAAGTCAGGGTAATTCATCGTCGTACAAGCCAGAAGTTTCTTATTAAGCAGCTAACTGACTGCAAGACTCGTGAAATTACTTTTCCCCTTGAAGATCCCGAAGGCATAAATCCCCCGAGGGATGTTCTTCTTGTTGACTACTTCAGGGATAAATATCAGCGCGAGATTCAGTTCAAGGATTTTCCTTCATTAGATATTGGAAAAGGTAATAAGAAAAACTATGTCCCGATGGAATTCTGTGTCTTGGTTGAGGGACAACGGTATCCCAAGGAGGATTTGGATAAAGATACTGCCTTGTTTCTGAAGAACATATCACTAGCTCGACCCCAAGATAGAAGGCAGGCAATTTGTGAAATGGTACGGGCTGGAGATGGGCCGTGCGGGTATGTGAATTCCTTAAATTTTGTCTTATTCATCTGAGATTTTGTTGTTTCCTCTTGAATTTCTTCTTTTTGACAAGAAGTATGTGGTTTTTGATACATGTGTCAGTTATTGGTGGATTTGAGTTTTTAAGCTGATGAATCAGTCTATGCTGCCTTAGTATGAATGATTTTGGTTGATCAATTTGTGGGGTTTGTTTATTTTTAAATGAAAGATTTATGGGGTTTTGTGGAACTAGAGAGATGACTTGCATCTACAATCGAAAGAGAAGAAAACAAAAAAAGCTAGATTTTATGTGAAATATCAGGAGGTTTGTTTCTGTTTGTGATTTTATTGTCTTTCATGTGTGTTATGGAATTGATTGTGGATGTGATATATTTTCTGTTATACTTGTGCTATCTTCTCTGGAAATTTCAAAGTTTTCTACTCAGCAATCTCTTCTCTGTTAGACATTATCATTAGAATTCGAATGGTATTTTATGGTAAGCTGCCTTTTGGGCTCTTCCTATGTCTGTCTTGCTATCGTTGTGTCTGTTCCAGATTTCAAGGGCTTGTTCTTCTTGATGTTGTTGTCATTTGAGTCGAGAGTCTTTCGTAGACAGCCTCTCTACCTCCACGAGATAGTGGTGTTAGGTCTGTGTACGACTCCACCTTCCTTAAACTCCATTTATGGAATGTATTGTTGTTTGAATCATGAATTTGTTGGTAGATATACTGATACAAGTTTTTAGCATTTTTTGTTAGAGACTTTCATTTTTCCTTCTAAGTTTCAATTGATTATTGCAGGGCTGTCACCCGCAATTTTGATATTGGAGTTGATAGGAACATGACCCGTGTTCCGGGTCGTATTCTTCCTCCCCCTGATTTGAAGCTAGGCGGTCAAAATCGACTTCCTGTGAATGATAAATGCCAGTGGAACCTTGTTGGGAAATCTGTGGTGGAAGGCAAGGCGCTTCAGCGATGGGCTTTGATAGATTTTAGCGCTCAGGATCGCAAACCCTTCTTTAGGCTACGAGTTGATGAATTTGTCTTCAGATTGAAAGATCGGTGCAGAAAATTGAGTATTAATATGGAAGAACCTGCTGTAGTACATTTCACTGACATGCATGTACTCTCTGAAGTTGGCAAGGTTCATAAACTTCTCGATGGTGTGGTTAATGCAGCTAAACGGGAAATCAATGGTAAACTTCAAATGATAGTTTGTGTTATGACATCAAAGCATAATGGGTACAAATATCTTAAATGGGTATCTGAGACACAAATTGGCGTAGTAACCCAGTGTTGCTTGTCTACTAATGCCAACAAGGGACAGGATCAATATCTTGCAAACCTGTGTATGAAGATCAATGCAAAACTTGGGGGCAGCAATATGGAACTTATGGATAGACTCCCTAATTTTGGAAGAGAAGACAATGTCATGTTCATTGGAGCTGATGTTAATCATCCTGCTGCAAAGAATGTGACATGTCCATCCATAGCAGCCGTTGTTGCCACCGTCAACTGGCCAGCTGCTAATAGATATGCTGCTAGAGTTTGTCCTCAGGTTCACAGGACTGAGAAGATTCTAGAGTTTGGAAAGATGTGTGCAGACCTAGTTCATACTTATAAGGAAATCAACTCTGTTAAACCAAACAAAATTGTTGTTTTCCGTGATGGTGTGAGTGAGGGTCAGTTTGATATGGTACTCAACGAAGAGTTGCTTGATTTGGCGAAGGCTATATACGACAGTAACTATCAACCAGCAATTACTCTTGTTGTGGCTCAGAAGAGACACCATACACGGCTATTTCCTGAGGGTGGCCCTGCCAATGTGCCTCCTGGTACTGTTGTGGATACAATAATTGTTCATCCCTCTGATTTTGACTTCTATCTTTGCAGCCACTTTGGAGGGTTGGGTACCAGCAAGCCAACTCACTATCATGTTCTATGGGATGATAATGGTTTCAATTCTGACAGCTTACAAAAGCTTATATACAACATGTGTTTCACTTTTGCGCGGTGCACTAAACCTGTCTCACTTGTTCCACCAGTTTACTATGCAGACCTTGTTGCTTATAGGGGACGGATGTTTCAAGAGGTGCTTATGGAGATGAACTCTCCTAGCTCTGCAACTTCATCTTCTCCAACTGCCTCATTTCAACAAAAATTTTATGATTTGCACTCTGATTTGCAGAACGTAATGTTTTTCGTCTGATGCCACCTTGTTGATCTCCTTCACCATTCCCACACTGGGGAGGGAGATACGGTTGTCTACATTTTGGAGATGCCCATTTCCAAACGCATTTGAACCTCCTTTCCGTTGGACATTGCAAAGGAGTTTGTGCGTGAATCTAATGGGGTTTCATGCTTCTTTTACTTTTCTATTGTGTGAGTTTAATCATTGACGTTTGATTGTGTTTTATCTGCTTTGGGGGGTCTCTGGAGGCCACTCCCAAATATGTCTACTGCTTAAATTGTGTGATGTTTTGTATTATGTATTTCTGAGACGTGTCTTAATATTAATATATTTGTGTTTGAGCTATTTGATGTCTATCTATCACTCATTCAATGTTATTGCA
| Download sequence region |
Get flanking sequences on SL2.50ch02
|
| mRNA Solyc02g069260.2.1
mRNA Solyc02g069260.2.1
|
| Ontology terms
Ontology terms
| terms associated with this mRNA |
| cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc02g069260.2.1 ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
ATGGATCGTGGGAACTACCGACGTGGTGGCGGTCATGATAACGCCGGCAGAGGTGGAGGTAACCGTGGTCGAGGACAAGGCCGTGGTGGTGGAAGGGGTGAGCCTCAGATCGGAGGTGGAAGGGGTGGGACCCACATCGGTGGTGGGTCCCAAATGGGTCAGCCTCCACAGCAATGGGGGAATCAGCCGAGGGGATCGGGTCAATACCAGATTCGTGGTGGGGCTCCGCAAAATCAACCGGGTCAAAACTATCCGGTTAATCAGAATCCGGGTCGTGGTGGTACTTGGGTAAACCAACCGGTTCAACGTGGTGGTGGTGGTGGGGGTAGCGCTTGGCCACGGCCACAACAGCAGGGTAGTGGCGTTCCAAACACTACTTGGCCCCGACCACCACCGCAGCAACAGGGTAGTGGTAGTGGAGTTGCTAATGCTTGGGCCCGGCCACCGCCGCAGAGGAGTCAGCAGCATGGTGGTGGAAATCAGCAGCAGGTTGTGGATCGTTCTCCTCCTCAATCTTCTGATCCTGTTCAAGTTGATCTGGGGTCCCTGAAAATTACAGATCAGAGTCCATCATCTCGACAAGAAAGTTCCAAGGAAAAACGTGTACCTATTGCACGACCTGATACTGGAAAAATTGCTGTCAAGTCAATTGCGCTGCTTGCTAATCATTTTCCTGTTAGATTTAATCCCCAGTCTACCATTATGCATTATGATGTGGATATTCAACAGAGGGCTGATGGGAATCGGCCTGTGAAGAAGCTAACAAACAAGTCTGTTCTCCATATGATAAGAGAAAAGCTGTGTGCGGATGACCCTACACGATTTCCCCTAGATAAAACTGCATATGACGGTAAGAAGAACATTTTCAGTGCTGTTCAACTTCCTACTGGGTGTTTTGCTGTGAACTGGTCTGACGGGGAAGATGCTAGGTTACGCTCTTATGACATTACCATCAAGCTTGTTGCTGAATTAAAACTTTGCAAGTTGAAAGAATATTTGAGTGGAAGCCTATCACATATTCCTCGTGATATACTACAAGGAATGGAGTTGGTTATGAAAGAAAATCCTACTAGGTGCAGGACTTCTGTAGGTCGTTGTTTCTACTCTAATGAGCACCTGCCCGACCATGACTTTCGTTTTGGTGTTGCTGCATATAGAGGTTTTCAACAGAGCCTAAAGCCTACAAAAGGAGGGCTTGCGTTGTGCTTAGATTACTCGGTCTTGGCACTCCGGAAACCAATGCCAGTGCTAGACTTTCTGAAGGAATATTTAGGAGAATCTAACGAAAATACCTTCAGGAACAACATTCGAGCTGCAAAGGGTGCATTGGTTGGTTTGAAAGTCAGGGTAATTCATCGTCGTACAAGCCAGAAGTTTCTTATTAAGCAGCTAACTGACTGCAAGACTCGTGAAATTACTTTTCCCCTTGAAGATCCCGAAGGCATAAATCCCCCGAGGGATGTTCTTCTTGTTGACTACTTCAGGGATAAATATCAGCGCGAGATTCAGTTCAAGGATTTTCCTTCATTAGATATTGGAAAAGGTAATAAGAAAAACTATGTCCCGATGGAATTCTGTGTCTTGGTTGAGGGACAACGGTATCCCAAGGAGGATTTGGATAAAGATACTGCCTTGTTTCTGAAGAACATATCACTAGCTCGACCCCAAGATAGAAGGCAGGCAATTTGTGAAATGGTACGGGCTGGAGATGGGCCGTGCGGGGCTGTCACCCGCAATTTTGATATTGGAGTTGATAGGAACATGACCCGTGTTCCGGGTCGTATTCTTCCTCCCCCTGATTTGAAGCTAGGCGGTCAAAATCGACTTCCTGTGAATGATAAATGCCAGTGGAACCTTGTTGGGAAATCTGTGGTGGAAGGCAAGGCGCTTCAGCGATGGGCTTTGATAGATTTTAGCGCTCAGGATCGCAAACCCTTCTTTAGGCTACGAGTTGATGAATTTGTCTTCAGATTGAAAGATCGGTGCAGAAAATTGAGTATTAATATGGAAGAACCTGCTGTAGTACATTTCACTGACATGCATGTACTCTCTGAAGTTGGCAAGGTTCATAAACTTCTCGATGGTGTGGTTAATGCAGCTAAACGGGAAATCAATGGTAAACTTCAAATGATAGTTTGTGTTATGACATCAAAGCATAATGGGTACAAATATCTTAAATGGGTATCTGAGACACAAATTGGCGTAGTAACCCAGTGTTGCTTGTCTACTAATGCCAACAAGGGACAGGATCAATATCTTGCAAACCTGTGTATGAAGATCAATGCAAAACTTGGGGGCAGCAATATGGAACTTATGGATAGACTCCCTAATTTTGGAAGAGAAGACAATGTCATGTTCATTGGAGCTGATGTTAATCATCCTGCTGCAAAGAATGTGACATGTCCATCCATAGCAGCCGTTGTTGCCACCGTCAACTGGCCAGCTGCTAATAGATATGCTGCTAGAGTTTGTCCTCAGGTTCACAGGACTGAGAAGATTCTAGAGTTTGGAAAGATGTGTGCAGACCTAGTTCATACTTATAAGGAAATCAACTCTGTTAAACCAAACAAAATTGTTGTTTTCCGTGATGGTGTGAGTGAGGGTCAGTTTGATATGGTACTCAACGAAGAGTTGCTTGATTTGGCGAAGGCTATATACGACAGTAACTATCAACCAGCAATTACTCTTGTTGTGGCTCAGAAGAGACACCATACACGGCTATTTCCTGAGGGTGGCCCTGCCAATGTGCCTCCTGGTACTGTTGTGGATACAATAATTGTTCATCCCTCTGATTTTGACTTCTATCTTTGCAGCCACTTTGGAGGGTTGGGTACCAGCAAGCCAACTCACTATCATGTTCTATGGGATGATAATGGTTTCAATTCTGACAGCTTACAAAAGCTTATATACAACATGTGTTTCACTTTTGCGCGGTGCACTAAACCTGTCTCACTTGTTCCACCAGTTTACTATGCAGACCTTGTTGCTTATAGGGGACGGATGTTTCAAGAGGTGCTTATGGAGATGAACTCTCCTAGCTCTGCAACTTCATCTTCTCCAACTGCCTCATTTCAACAAAAATTTTATGATTTGCACTCTGATTTGCAGAACGTAATGTTTTTCGTCTGATGCCACCTTGTTGATCTCCTTCACCATTCCCACACTGGGGAGGGAGATACGGTTGTCTACATTTTGGAGATGCCCATTTCCAAACGCATTTGAACCTCCTTTCCGTTGGACATTGCAAAGGAGTTTGTGCGTGAATCTAATGGGGTTTCATGCTTCTTTTACTTTTCTATTGTGTGAGTTTAATCATTGACGTTTGATTGTGTTTTATCTGCTTTGGGGGGTCTCTGGAGGCCACTCCCAAATATGTCTACTGCTTAAATTGTGTGATGTTTTGTATTATGTATTTCTGAGACGTGTCTTAATATTAATATATTTGTGTTTGAGCTATTTGATGTCTATCTATCACTCATTCAATGTTATTGCA
ATGGATCGTGGGAACTACCGACGTGGTGGCGGTCATGATAACGCCGGCAGAGGTGGAGGTAACCGTGGTCGAGGACAAGGCCGTGGTGGTGGAAGGGGTGAGCCTCAGATCGGAGGTGGAAGGGGTGGGACCCACATCGGTGGTGGGTCCCAAATGGGTCAGCCTCCACAGCAATGGGGGAATCAGCCGAGGGGATCGGGTCAATACCAGATTCGTGGTGGGGCTCCGCAAAATCAACCGGGTCAAAACTATCCGGTTAATCAGAATCCGGGTCGTGGTGGTACTTGGGTAAACCAACCGGTTCAACGTGGTGGTGGTGGTGGGGGTAGCGCTTGGCCACGGCCACAACAGCAGGGTAGTGGCGTTCCAAACACTACTTGGCCCCGACCACCACCGCAGCAACAGGGTAGTGGTAGTGGAGTTGCTAATGCTTGGGCCCGGCCACCGCCGCAGAGGAGTCAGCAGCATGGTGGTGGAAATCAGCAGCAGGTTGTGGATCGTTCTCCTCCTCAATCTTCTGATCCTGTTCAAGTTGATCTGGGGTCCCTGAAAATTACAGATCAGAGTCCATCATCTCGACAAGAAAGTTCCAAGGAAAAACGTGTACCTATTGCACGACCTGATACTGGAAAAATTGCTGTCAAGTCAATTGCGCTGCTTGCTAATCATTTTCCTGTTAGATTTAATCCCCAGTCTACCATTATGCATTATGATGTGGATATTCAACAGAGGGCTGATGGGAATCGGCCTGTGAAGAAGCTAACAAACAAGTCTGTTCTCCATATGATAAGAGAAAAGCTGTGTGCGGATGACCCTACACGATTTCCCCTAGATAAAACTGCATATGACGGTAAGAAGAACATTTTCAGTGCTGTTCAACTTCCTACTGGGTGTTTTGCTGTGAACTGGTCTGACGGGGAAGATGCTAGGTTACGCTCTTATGACATTACCATCAAGCTTGTTGCTGAATTAAAACTTTGCAAGTTGAAAGAATATTTGAGTGGAAGCCTATCACATATTCCTCGTGATATACTACAAGGAATGGAGTTGGTTATGAAAGAAAATCCTACTAGGTGCAGGACTTCTGTAGGTCGTTGTTTCTACTCTAATGAGCACCTGCCCGACCATGACTTTCGTTTTGGTGTTGCTGCATATAGAGGTTTTCAACAGAGCCTAAAGCCTACAAAAGGAGGGCTTGCGTTGTGCTTAGATTACTCGGTCTTGGCACTCCGGAAACCAATGCCAGTGCTAGACTTTCTGAAGGAATATTTAGGAGAATCTAACGAAAATACCTTCAGGAACAACATTCGAGCTGCAAAGGGTGCATTGGTTGGTTTGAAAGTCAGGGTAATTCATCGTCGTACAAGCCAGAAGTTTCTTATTAAGCAGCTAACTGACTGCAAGACTCGTGAAATTACTTTTCCCCTTGAAGATCCCGAAGGCATAAATCCCCCGAGGGATGTTCTTCTTGTTGACTACTTCAGGGATAAATATCAGCGCGAGATTCAGTTCAAGGATTTTCCTTCATTAGATATTGGAAAAGGTAATAAGAAAAACTATGTCCCGATGGAATTCTGTGTCTTGGTTGAGGGACAACGGTATCCCAAGGAGGATTTGGATAAAGATACTGCCTTGTTTCTGAAGAACATATCACTAGCTCGACCCCAAGATAGAAGGCAGGCAATTTGTGAAATGGTACGGGCTGGAGATGGGCCGTGCGGGGCTGTCACCCGCAATTTTGATATTGGAGTTGATAGGAACATGACCCGTGTTCCGGGTCGTATTCTTCCTCCCCCTGATTTGAAGCTAGGCGGTCAAAATCGACTTCCTGTGAATGATAAATGCCAGTGGAACCTTGTTGGGAAATCTGTGGTGGAAGGCAAGGCGCTTCAGCGATGGGCTTTGATAGATTTTAGCGCTCAGGATCGCAAACCCTTCTTTAGGCTACGAGTTGATGAATTTGTCTTCAGATTGAAAGATCGGTGCAGAAAATTGAGTATTAATATGGAAGAACCTGCTGTAGTACATTTCACTGACATGCATGTACTCTCTGAAGTTGGCAAGGTTCATAAACTTCTCGATGGTGTGGTTAATGCAGCTAAACGGGAAATCAATGGTAAACTTCAAATGATAGTTTGTGTTATGACATCAAAGCATAATGGGTACAAATATCTTAAATGGGTATCTGAGACACAAATTGGCGTAGTAACCCAGTGTTGCTTGTCTACTAATGCCAACAAGGGACAGGATCAATATCTTGCAAACCTGTGTATGAAGATCAATGCAAAACTTGGGGGCAGCAATATGGAACTTATGGATAGACTCCCTAATTTTGGAAGAGAAGACAATGTCATGTTCATTGGAGCTGATGTTAATCATCCTGCTGCAAAGAATGTGACATGTCCATCCATAGCAGCCGTTGTTGCCACCGTCAACTGGCCAGCTGCTAATAGATATGCTGCTAGAGTTTGTCCTCAGGTTCACAGGACTGAGAAGATTCTAGAGTTTGGAAAGATGTGTGCAGACCTAGTTCATACTTATAAGGAAATCAACTCTGTTAAACCAAACAAAATTGTTGTTTTCCGTGATGGTGTGAGTGAGGGTCAGTTTGATATGGTACTCAACGAAGAGTTGCTTGATTTGGCGAAGGCTATATACGACAGTAACTATCAACCAGCAATTACTCTTGTTGTGGCTCAGAAGAGACACCATACACGGCTATTTCCTGAGGGTGGCCCTGCCAATGTGCCTCCTGGTACTGTTGTGGATACAATAATTGTTCATCCCTCTGATTTTGACTTCTATCTTTGCAGCCACTTTGGAGGGTTGGGTACCAGCAAGCCAACTCACTATCATGTTCTATGGGATGATAATGGTTTCAATTCTGACAGCTTACAAAAGCTTATATACAACATGTGTTTCACTTTTGCGCGGTGCACTAAACCTGTCTCACTTGTTCCACCAGTTTACTATGCAGACCTTGTTGCTTATAGGGGACGGATGTTTCAAGAGGTGCTTATGGAGATGAACTCTCCTAGCTCTGCAACTTCATCTTCTCCAACTGCCTCATTTCAACAAAAATTTTATGATTTGCACTCTGATTTGCAGAACGTAATGTTTTTCGTCTGATGCCACCTTGTTGATCTCCTTCACCATTCCCACACTGGGGAGGGAGATACGGTTGTCTACATTTTGGAGATGCCCATTTCCAAACGCATTTGAACCTCCTTTCCGTTGGACATTGCAAAGGAGTTTGTGCGTGAATCTAATGGGGTTTCATGCTTCTTTTACTTTTCTATTGTGTGAGTTTAATCATTGACGTTTGATTGTGTTTTATCTGCTTTGGGGGGTCTCTGGAGGCCACTCCCAAATATGTCTACTGCTTAAATTGTGTGATGTTTTGTATTATGTATTTCTGAGACGTGTCTTAATATTAATATATTTGTGTTTGAGCTATTTGATGTCTATCTATCACTCATTCAATGTTATTGCA
| Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc02g069260.2.1 ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
MDRGNYRRGGGHDNAGRGGGNRGRGQGRGGGRGEPQIGGGRGGTHIGGGSQMGQPPQQWGNQPRGSGQYQIRGGAPQNQPGQNYPVNQNPGRGGTWVNQPVQRGGGGGGSAWPRPQQQGSGVPNTTWPRPPPQQQGSGSGVANAWARPPPQRSQQHGGGNQQQVVDRSPPQSSDPVQVDLGSLKITDQSPSSRQESSKEKRVPIARPDTGKIAVKSIALLANHFPVRFNPQSTIMHYDVDIQQRADGNRPVKKLTNKSVLHMIREKLCADDPTRFPLDKTAYDGKKNIFSAVQLPTGCFAVNWSDGEDARLRSYDITIKLVAELKLCKLKEYLSGSLSHIPRDILQGMELVMKENPTRCRTSVGRCFYSNEHLPDHDFRFGVAAYRGFQQSLKPTKGGLALCLDYSVLALRKPMPVLDFLKEYLGESNENTFRNNIRAAKGALVGLKVRVIHRRTSQKFLIKQLTDCKTREITFPLEDPEGINPPRDVLLVDYFRDKYQREIQFKDFPSLDIGKGNKKNYVPMEFCVLVEGQRYPKEDLDKDTALFLKNISLARPQDRRQAICEMVRAGDGPCGAVTRNFDIGVDRNMTRVPGRILPPPDLKLGGQNRLPVNDKCQWNLVGKSVVEGKALQRWALIDFSAQDRKPFFRLRVDEFVFRLKDRCRKLSINMEEPAVVHFTDMHVLSEVGKVHKLLDGVVNAAKREINGKLQMIVCVMTSKHNGYKYLKWVSETQIGVVTQCCLSTNANKGQDQYLANLCMKINAKLGGSNMELMDRLPNFGREDNVMFIGADVNHPAAKNVTCPSIAAVVATVNWPAANRYAARVCPQVHRTEKILEFGKMCADLVHTYKEINSVKPNKIVVFRDGVSEGQFDMVLNEELLDLAKAIYDSNYQPAITLVVAQKRHHTRLFPEGGPANVPPGTVVDTIIVHPSDFDFYLCSHFGGLGTSKPTHYHVLWDDNGFNSDSLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEMNSPSSATSSSPTASFQQKFYDLHSDLQNVMFFV*
MDRGNYRRGGGHDNAGRGGGNRGRGQGRGGGRGEPQIGGGRGGTHIGGGSQMGQPPQQWGNQPRGSGQYQIRGGAPQNQPGQNYPVNQNPGRGGTWVNQPVQRGGGGGGSAWPRPQQQGSGVPNTTWPRPPPQQQGSGSGVANAWARPPPQRSQQHGGGNQQQVVDRSPPQSSDPVQVDLGSLKITDQSPSSRQESSKEKRVPIARPDTGKIAVKSIALLANHFPVRFNPQSTIMHYDVDIQQRADGNRPVKKLTNKSVLHMIREKLCADDPTRFPLDKTAYDGKKNIFSAVQLPTGCFAVNWSDGEDARLRSYDITIKLVAELKLCKLKEYLSGSLSHIPRDILQGMELVMKENPTRCRTSVGRCFYSNEHLPDHDFRFGVAAYRGFQQSLKPTKGGLALCLDYSVLALRKPMPVLDFLKEYLGESNENTFRNNIRAAKGALVGLKVRVIHRRTSQKFLIKQLTDCKTREITFPLEDPEGINPPRDVLLVDYFRDKYQREIQFKDFPSLDIGKGNKKNYVPMEFCVLVEGQRYPKEDLDKDTALFLKNISLARPQDRRQAICEMVRAGDGPCGAVTRNFDIGVDRNMTRVPGRILPPPDLKLGGQNRLPVNDKCQWNLVGKSVVEGKALQRWALIDFSAQDRKPFFRLRVDEFVFRLKDRCRKLSINMEEPAVVHFTDMHVLSEVGKVHKLLDGVVNAAKREINGKLQMIVCVMTSKHNGYKYLKWVSETQIGVVTQCCLSTNANKGQDQYLANLCMKINAKLGGSNMELMDRLPNFGREDNVMFIGADVNHPAAKNVTCPSIAAVVATVNWPAANRYAARVCPQVHRTEKILEFGKMCADLVHTYKEINSVKPNKIVVFRDGVSEGQFDMVLNEELLDLAKAIYDSNYQPAITLVVAQKRHHTRLFPEGGPANVPPGTVVDTIIVHPSDFDFYLCSHFGGLGTSKPTHYHVLWDDNGFNSDSLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEMNSPSSATSSSPTASFQQKFYDLHSDLQNVMFFV*
| Gene model matches
Gene model matches
|
| SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
[loading...]
| GenBank accessions | None | [Associate new genbank sequence] |
| Other genome matches | None |
| Literature annotations [1]
Literature annotations [1]
| [Associate publication] [Matching publications] |
Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum.
Gene (2012)
Show / hide abstract
Show / hide abstract
Dicer, Argonaute and RNA-dependent RNA polymerase form the core components to trigger RNA silencing. Although tomato (Solanum lycopersicum) is a dicotyledon model plant, no systematic analysis and expression profiling of these genes in tomato has been undertaken previously. In this study, seven Dicer-like (SlDCLs), 15 Argonaute (SlAGOs) and six RNA-dependent RNA polymerase (SlRDRs) genes were identified in tomato. These genes were categorized into four subgroups based on phylogenetic analyses. Comprehensive analyses of gene structure, genomic localization and similarity among these genes were performed. Their expression patterns were investigated by means of expression models in different tissues and organs using online data and semi-quantitative RT-PCR. Many of the candidate genes were up-regulated in response to Tomato yellow leaf curl virus infection and abiotic stresses. The expression models of tandem gene duplications among SlDCL2s indicated the DCL2 family plays an important role in the evolution of tomato.
Bai, M. Yang, GS. Chen, WT. Mao, ZC. Kang, HX. Chen, GH. Yang, YH. Xie, BY.
Gene.
2012.
().
.
| Ontology annotations (2)
Ontology annotations (2)
| [Add ontology annotations] |
[loading...]
| Related views
Related views
|
- Genomic details
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Your Lists
Public Lists
List Contents
List Validation Report: Failed
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Click the Adjust Case button to align the case in the list with what is in the database.
Multiple mismatched case
Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
List elements matching a synonym
Multiple synonym matches
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Your Datasets
Public Datasets
Dataset Contents
Dataset Validation Failed
Elements not found:
Your Calendar
Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?
Add New Event
Event Info
| Attribute | Value |
|---|---|
| Project Name: | |
| Start Date: | |
| End Date: | |
| Event Type: | |
| Event Description: | |
| Event Web URL: |
Edit Event
Login
Forgot Username
If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.
Reset Password
To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.
Create New User
Working
