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Tomato locus Woolly
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
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Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc02g080260.2 SL2.50ch02:44532858..44536817
ATGTTTAATAACCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTCGTAAGTAATTTAATTTATATATACTGACAGTACATTTATTAACTATATATAACAATTGTTCCGTTTCTTTTTTGTCATTGTACAGCTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAGGTGAAAAACTCTTTTTTCTTTTCTTGTCTGTAATGTAAAGTTAATATATTTGATGTAAAAAATTGAGATGAATACATTCATTCAATTTATATAGACAGGATGATTGAGGTACGTGTGCTTGAAAACTTTATAATTAGATTGTGATTTTATTGTTGTTACAGGCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCATGCCCAAATTGTGGAGGGCCAGCAGCTATAGGAGAGATGTCATTTGATGAGCATCAGTTGAGGATTGAAAATGCTCGTCTTAGAGATGAGGTAGGAGCATTACTAATTGAAAACCTGCCTCATTTTTCAAGTTATTAATTTTAGTACTTGTGAACACACCGATTATAAATTTTGCCTTTAACGGTTTGGATGAACACTCAATCCTACATAACCCTAAATGTTTTGATAAAGGTGATGCCCCCGACCCATTTTACACCTTTCCGTTCATTCGTCCACAATCCCCTCATCCTTTTAATTTACGTAATACATTTTTCTTTTTAGCCTATAAGAAACAATTTAATTTTGAAATTATAATTTTACCTTTTTAACTTTCCACACAATTAAACATTGTCACTTGTATTAGGACTGAGCAAGAAGATTTTAAAACGGAGTAATAAGAAAATAGTTCACATGAAATGGCATTCAAAGTGACTTGACGGAAATTTTAAGTTATTTTATGTTTTATGATACAGATTGACAGGATAACTGGAATAGCTGGAAAGTATGTTGGTAAATCAGCCCTTGGATATTCTCATCAACTTCCTCTTCCTCAGCCCGAAGCTCCTCGGGTTCTGGATCTTGCTTTTGGGCCTCAATCGGGCCTGCTTGGAGAAATGTACGCTGCTGGTGACCTTCTAAGAACTGCTGTTACGGGCCTTACAGATGCTGAGAAGCCCGTGGTCATTGAGCTTGCTGTTACTGCAATGGAGGAACTTATAAGGATGGCTCAAACTGAAGAGCCATTATGGTTGCCAAGCTCAGGCTCTGAGACTTTATGTGAGCAAGAATATGCTCGTATTTTCCCTCGAGGCCTTGGACCTAAGCCAGCTACACTCAATTCTGAAGCCTCACGAGAATCTGCTGTTGTGATTATGAATCATATCAATTTAGTTGAGATTTTGATGGATGTGGTAAGATTTCTAATTTTAATGTGCAACCTTACCTTCCTCGGACGAATACTTTGTGCACATTTTTAACTAATTGTACATTTCAGAACCAATGGACTACTGTTTTTGCTGGTCTGGTGTCAAAAGCAATGACTCTTGAAGTCTTATCAACTGGTGTCGCAGGAAATCACAATGGAGCATTGCAAGTGGTATTGTTCAGATTTCACTTAACAATATTTTGTTTGAATTCTTTCCTTCTTTTTTAAACAGATGAAATATACTCTAATTGATTTCCTTTTTTTGATGTTCTAATTTTAGATGACAGCAGAATTTCAAGTTCCATCTCCACTTGTTCCAACTCGGGAGAACTATTTCTTAAGATACTGTAAACAACATGGTGAAGGGACTTGGGTAGTGGTTGATGTTTCCCTGGACAACTTGCGCACTGTTTCAGTTCCGCGTTGCAGAAGAAGGCCATCTGGTTGTTTAATCCAAGAAATGCCAAATGGTTACTCAAGGGTATCGAAATTCCTCAAATTTTAAACTCTTTAGAACATGATTAAACTCTAAGTCCGTAACACATTGTTATTTGTGTAGGTTATATGGGTTGAACACGTTGAGGTGGATGAAAATGCTGTCCATGACATCTACAAACCTCTTGTCAATTCTGGGATTGCATTTGGAGCAAAACGCTGGGTAGCAACTTTAGATAGACAATGTGAACGCCTTGCAAGTGTGTTGGCGCTTAACATCCCAACAGGAGATGTTGGAAGTAATAGCAAAAAAAAAAAAATCTCTACTCTTTCATTAATTAGTCTGTCAATGCTGTACAATTGCAAATTACTAATGTTTTTTCGTCCTAATTTTCAGTCATTACTAGTCCAGCTGGTCGAAAGAGTATGCTAAAACTTGCTGAGAGAATGGTGATGAGCTTTTGTGCTGGAGTTGGTGCATCGACAACTCACATATGGACAACTTTGTCTGGAAGTGGTGCGGATGATGTTAGAGTCATGACTAGGAAGAGTATCGATGATCCAGGGAGACCTCCTGGTATTGTGCTGAGTGCTGCAACATCTTTTTGGCTTCCAGTTTCTCCTAAGAGAGTGTTTGATTTTCTCCGCGATGAGAACTCTAGAAATGAGGTAAAGCATATTCACCTTCAATTAAGTTGTCCACTTTTATCAAATTCGCTCTGTTTTATTGTGTCCTAATCTAATTCACTGCTAAATATATGTGCAGTGGGATATTCTTTCAAATGGTGGGATTGTTCAGGAAATGGCACACATTGCAAATGGTCGTGATCCAGGAAACTGTGTTTCTCTACTCCGTGTCAATGTATGATATCCGGGTTTGTTAATTTTTTATTAATTTTGGCAAAAAAATACTCAAATAAGTATTTCTATTTTTGCAGACTGGAACAAACTCTAACCAGAGTAACATGCTGATACTCCAAGAGAGCACAACTGATGTAACAGGATCTTACGTCATTTACGCTCCAGTTGATATTGCTGCAATGAACGTGGTGTTAGGTGGGGGTGACCCTGACTATGTTGCTCTGTTGCCATCTGGTTTTGCTATTCTTCCAGACGGACCGATGAATTATCATGGTGGAGGTAATTCAGAAATTGATTCTCCTGGTGGATCGCTACTAACTGTAGCATTTCAGATATTGGTTGATTCAGTCCCAACTGCAAAGCTTTCCCTTGGCTCTGTTGCGACTGTTAATAGTCTCATCAAATGCACCGTTGAAAAGATCAAAGGTGCTGTAACTTCCGCAAATGCATGAAGGTAAAACATCTTTTACACATGTTTATGAATTGGATTTTTATATACTACTTGCAATGTGTTTTACTTCCTTTATCCCAGTTTAACTTTAAACTTCTCCTAGTGAAATGATTTTTATCCAAACACTTGTTTTGAACCTACAAGTTTCAATAGCCTTATACTATTATAAGTTACTCCTATTTTTGTTGCATCTTTTTATTTTTTTTTGTGATAGGCGGCAGGTGGTCTTGGATGGGGGAGAGTTGAAAGAAGTTACAAGTTAGATGAAGGGGAAGGGAGCTAGTGGAGAAGGCAACTTAAAGGAAATCCTTGCAGGTGGTGATTGTTTTTTTGGCAAAAAAACATTTCACTATCCTGTAAGGATGTAGTTTTTTTTTGGTTTTAATATATAGGGTTTAGGGTAGACTTTGCCAATGTTATATTGGTATATGTCAAGAATATTATAAAACTAAGCTAGCAAACAAAGCTTTATTTTGTTTTGAACCCTTTTGCTTTAAGGGTTAATTGTTGGAACAAGTTAGTTCTCTATGTTTTAAAAAGAAGTTTAGTTTGACTTCTG
ATGTTTAATAACCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTCGTAAGTAATTTAATTTATATATACTGACAGTACATTTATTAACTATATATAACAATTGTTCCGTTTCTTTTTTGTCATTGTACAGCTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAGGTGAAAAACTCTTTTTTCTTTTCTTGTCTGTAATGTAAAGTTAATATATTTGATGTAAAAAATTGAGATGAATACATTCATTCAATTTATATAGACAGGATGATTGAGGTACGTGTGCTTGAAAACTTTATAATTAGATTGTGATTTTATTGTTGTTACAGGCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCATGCCCAAATTGTGGAGGGCCAGCAGCTATAGGAGAGATGTCATTTGATGAGCATCAGTTGAGGATTGAAAATGCTCGTCTTAGAGATGAGGTAGGAGCATTACTAATTGAAAACCTGCCTCATTTTTCAAGTTATTAATTTTAGTACTTGTGAACACACCGATTATAAATTTTGCCTTTAACGGTTTGGATGAACACTCAATCCTACATAACCCTAAATGTTTTGATAAAGGTGATGCCCCCGACCCATTTTACACCTTTCCGTTCATTCGTCCACAATCCCCTCATCCTTTTAATTTACGTAATACATTTTTCTTTTTAGCCTATAAGAAACAATTTAATTTTGAAATTATAATTTTACCTTTTTAACTTTCCACACAATTAAACATTGTCACTTGTATTAGGACTGAGCAAGAAGATTTTAAAACGGAGTAATAAGAAAATAGTTCACATGAAATGGCATTCAAAGTGACTTGACGGAAATTTTAAGTTATTTTATGTTTTATGATACAGATTGACAGGATAACTGGAATAGCTGGAAAGTATGTTGGTAAATCAGCCCTTGGATATTCTCATCAACTTCCTCTTCCTCAGCCCGAAGCTCCTCGGGTTCTGGATCTTGCTTTTGGGCCTCAATCGGGCCTGCTTGGAGAAATGTACGCTGCTGGTGACCTTCTAAGAACTGCTGTTACGGGCCTTACAGATGCTGAGAAGCCCGTGGTCATTGAGCTTGCTGTTACTGCAATGGAGGAACTTATAAGGATGGCTCAAACTGAAGAGCCATTATGGTTGCCAAGCTCAGGCTCTGAGACTTTATGTGAGCAAGAATATGCTCGTATTTTCCCTCGAGGCCTTGGACCTAAGCCAGCTACACTCAATTCTGAAGCCTCACGAGAATCTGCTGTTGTGATTATGAATCATATCAATTTAGTTGAGATTTTGATGGATGTGGTAAGATTTCTAATTTTAATGTGCAACCTTACCTTCCTCGGACGAATACTTTGTGCACATTTTTAACTAATTGTACATTTCAGAACCAATGGACTACTGTTTTTGCTGGTCTGGTGTCAAAAGCAATGACTCTTGAAGTCTTATCAACTGGTGTCGCAGGAAATCACAATGGAGCATTGCAAGTGGTATTGTTCAGATTTCACTTAACAATATTTTGTTTGAATTCTTTCCTTCTTTTTTAAACAGATGAAATATACTCTAATTGATTTCCTTTTTTTGATGTTCTAATTTTAGATGACAGCAGAATTTCAAGTTCCATCTCCACTTGTTCCAACTCGGGAGAACTATTTCTTAAGATACTGTAAACAACATGGTGAAGGGACTTGGGTAGTGGTTGATGTTTCCCTGGACAACTTGCGCACTGTTTCAGTTCCGCGTTGCAGAAGAAGGCCATCTGGTTGTTTAATCCAAGAAATGCCAAATGGTTACTCAAGGGTATCGAAATTCCTCAAATTTTAAACTCTTTAGAACATGATTAAACTCTAAGTCCGTAACACATTGTTATTTGTGTAGGTTATATGGGTTGAACACGTTGAGGTGGATGAAAATGCTGTCCATGACATCTACAAACCTCTTGTCAATTCTGGGATTGCATTTGGAGCAAAACGCTGGGTAGCAACTTTAGATAGACAATGTGAACGCCTTGCAAGTGTGTTGGCGCTTAACATCCCAACAGGAGATGTTGGAAGTAATAGCAAAAAAAAAAAAATCTCTACTCTTTCATTAATTAGTCTGTCAATGCTGTACAATTGCAAATTACTAATGTTTTTTCGTCCTAATTTTCAGTCATTACTAGTCCAGCTGGTCGAAAGAGTATGCTAAAACTTGCTGAGAGAATGGTGATGAGCTTTTGTGCTGGAGTTGGTGCATCGACAACTCACATATGGACAACTTTGTCTGGAAGTGGTGCGGATGATGTTAGAGTCATGACTAGGAAGAGTATCGATGATCCAGGGAGACCTCCTGGTATTGTGCTGAGTGCTGCAACATCTTTTTGGCTTCCAGTTTCTCCTAAGAGAGTGTTTGATTTTCTCCGCGATGAGAACTCTAGAAATGAGGTAAAGCATATTCACCTTCAATTAAGTTGTCCACTTTTATCAAATTCGCTCTGTTTTATTGTGTCCTAATCTAATTCACTGCTAAATATATGTGCAGTGGGATATTCTTTCAAATGGTGGGATTGTTCAGGAAATGGCACACATTGCAAATGGTCGTGATCCAGGAAACTGTGTTTCTCTACTCCGTGTCAATGTATGATATCCGGGTTTGTTAATTTTTTATTAATTTTGGCAAAAAAATACTCAAATAAGTATTTCTATTTTTGCAGACTGGAACAAACTCTAACCAGAGTAACATGCTGATACTCCAAGAGAGCACAACTGATGTAACAGGATCTTACGTCATTTACGCTCCAGTTGATATTGCTGCAATGAACGTGGTGTTAGGTGGGGGTGACCCTGACTATGTTGCTCTGTTGCCATCTGGTTTTGCTATTCTTCCAGACGGACCGATGAATTATCATGGTGGAGGTAATTCAGAAATTGATTCTCCTGGTGGATCGCTACTAACTGTAGCATTTCAGATATTGGTTGATTCAGTCCCAACTGCAAAGCTTTCCCTTGGCTCTGTTGCGACTGTTAATAGTCTCATCAAATGCACCGTTGAAAAGATCAAAGGTGCTGTAACTTCCGCAAATGCATGAAGGTAAAACATCTTTTACACATGTTTATGAATTGGATTTTTATATACTACTTGCAATGTGTTTTACTTCCTTTATCCCAGTTTAACTTTAAACTTCTCCTAGTGAAATGATTTTTATCCAAACACTTGTTTTGAACCTACAAGTTTCAATAGCCTTATACTATTATAAGTTACTCCTATTTTTGTTGCATCTTTTTATTTTTTTTTGTGATAGGCGGCAGGTGGTCTTGGATGGGGGAGAGTTGAAAGAAGTTACAAGTTAGATGAAGGGGAAGGGAGCTAGTGGAGAAGGCAACTTAAAGGAAATCCTTGCAGGTGGTGATTGTTTTTTTGGCAAAAAAACATTTCACTATCCTGTAAGGATGTAGTTTTTTTTTGGTTTTAATATATAGGGTTTAGGGTAGACTTTGCCAATGTTATATTGGTATATGTCAAGAATATTATAAAACTAAGCTAGCAAACAAAGCTTTATTTTGTTTTGAACCCTTTTGCTTTAAGGGTTAATTGTTGGAACAAGTTAGTTCTCTATGTTTTAAAAAGAAGTTTAGTTTGACTTCTG
Download sequence region |
Get flanking sequences on SL2.50ch02
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc02g080260.2.1 Homeobox leucine-zipper protein (AHRD V1 ***- Q8H962_ZINEL); contains Interpro domain(s) IPR002913 Lipid-binding START
ATGTTTAATAACCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTCCTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAGGCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCATGCCCAAATTGTGGAGGGCCAGCAGCTATAGGAGAGATGTCATTTGATGAGCATCAGTTGAGGATTGAAAATGCTCGTCTTAGAGATGAGATTGACAGGATAACTGGAATAGCTGGAAAGTATGTTGGTAAATCAGCCCTTGGATATTCTCATCAACTTCCTCTTCCTCAGCCCGAAGCTCCTCGGGTTCTGGATCTTGCTTTTGGGCCTCAATCGGGCCTGCTTGGAGAAATGTACGCTGCTGGTGACCTTCTAAGAACTGCTGTTACGGGCCTTACAGATGCTGAGAAGCCCGTGGTCATTGAGCTTGCTGTTACTGCAATGGAGGAACTTATAAGGATGGCTCAAACTGAAGAGCCATTATGGTTGCCAAGCTCAGGCTCTGAGACTTTATGTGAGCAAGAATATGCTCGTATTTTCCCTCGAGGCCTTGGACCTAAGCCAGCTACACTCAATTCTGAAGCCTCACGAGAATCTGCTGTTGTGATTATGAATCATATCAATTTAGTTGAGATTTTGATGGATGTGAACCAATGGACTACTGTTTTTGCTGGTCTGGTGTCAAAAGCAATGACTCTTGAAGTCTTATCAACTGGTGTCGCAGGAAATCACAATGGAGCATTGCAAGTGATGACAGCAGAATTTCAAGTTCCATCTCCACTTGTTCCAACTCGGGAGAACTATTTCTTAAGATACTGTAAACAACATGGTGAAGGGACTTGGGTAGTGGTTGATGTTTCCCTGGACAACTTGCGCACTGTTTCAGTTCCGCGTTGCAGAAGAAGGCCATCTGGTTGTTTAATCCAAGAAATGCCAAATGGTTACTCAAGGGTTATATGGGTTGAACACGTTGAGGTGGATGAAAATGCTGTCCATGACATCTACAAACCTCTTGTCAATTCTGGGATTGCATTTGGAGCAAAACGCTGGGTAGCAACTTTAGATAGACAATGTGAACGCCTTGCAAGTGTGTTGGCGCTTAACATCCCAACAGGAGATGTTGGAATCATTACTAGTCCAGCTGGTCGAAAGAGTATGCTAAAACTTGCTGAGAGAATGGTGATGAGCTTTTGTGCTGGAGTTGGTGCATCGACAACTCACATATGGACAACTTTGTCTGGAAGTGGTGCGGATGATGTTAGAGTCATGACTAGGAAGAGTATCGATGATCCAGGGAGACCTCCTGGTATTGTGCTGAGTGCTGCAACATCTTTTTGGCTTCCAGTTTCTCCTAAGAGAGTGTTTGATTTTCTCCGCGATGAGAACTCTAGAAATGAGTGGGATATTCTTTCAAATGGTGGGATTGTTCAGGAAATGGCACACATTGCAAATGGTCGTGATCCAGGAAACTGTGTTTCTCTACTCCGTGTCAATACTGGAACAAACTCTAACCAGAGTAACATGCTGATACTCCAAGAGAGCACAACTGATGTAACAGGATCTTACGTCATTTACGCTCCAGTTGATATTGCTGCAATGAACGTGGTGTTAGGTGGGGGTGACCCTGACTATGTTGCTCTGTTGCCATCTGGTTTTGCTATTCTTCCAGACGGACCGATGAATTATCATGGTGGAGGTAATTCAGAAATTGATTCTCCTGGTGGATCGCTACTAACTGTAGCATTTCAGATATTGGTTGATTCAGTCCCAACTGCAAAGCTTTCCCTTGGCTCTGTTGCGACTGTTAATAGTCTCATCAAATGCACCGTTGAAAAGATCAAAGGTGCTGTAACTTCCGCAAATGCGGCAGGTGGTCTTGGATGGGGGAGAGTTGAAAGAAGTTACAAGTTAGATGAAGGGGAAGGGAGCTAGTGGAGAAGGCAACTTAAAGGAAATCCTTGCAGGTGGTGATTGTTTTTTTGGCAAAAAAACATTTCACTATCCTGTAAGGATGTAGTTTTTTTTTGGTTTTAATATATAGGGTTTAGGGTAGACTTTGCCAATGTTATATTGGTATATGTCAAGAATATTATAAAACTAAGCTAGCAAACAAAGCTTTATTTTGTTTTGAACCCTTTTGCTTTAAGGGTTAATTGTTGGAACAAGTTAGTTCTCTATGTTTTAAAAAGAAGTTTAGTTTGACTTCTG
ATGTTTAATAACCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTCCTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAGGCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCATGCCCAAATTGTGGAGGGCCAGCAGCTATAGGAGAGATGTCATTTGATGAGCATCAGTTGAGGATTGAAAATGCTCGTCTTAGAGATGAGATTGACAGGATAACTGGAATAGCTGGAAAGTATGTTGGTAAATCAGCCCTTGGATATTCTCATCAACTTCCTCTTCCTCAGCCCGAAGCTCCTCGGGTTCTGGATCTTGCTTTTGGGCCTCAATCGGGCCTGCTTGGAGAAATGTACGCTGCTGGTGACCTTCTAAGAACTGCTGTTACGGGCCTTACAGATGCTGAGAAGCCCGTGGTCATTGAGCTTGCTGTTACTGCAATGGAGGAACTTATAAGGATGGCTCAAACTGAAGAGCCATTATGGTTGCCAAGCTCAGGCTCTGAGACTTTATGTGAGCAAGAATATGCTCGTATTTTCCCTCGAGGCCTTGGACCTAAGCCAGCTACACTCAATTCTGAAGCCTCACGAGAATCTGCTGTTGTGATTATGAATCATATCAATTTAGTTGAGATTTTGATGGATGTGAACCAATGGACTACTGTTTTTGCTGGTCTGGTGTCAAAAGCAATGACTCTTGAAGTCTTATCAACTGGTGTCGCAGGAAATCACAATGGAGCATTGCAAGTGATGACAGCAGAATTTCAAGTTCCATCTCCACTTGTTCCAACTCGGGAGAACTATTTCTTAAGATACTGTAAACAACATGGTGAAGGGACTTGGGTAGTGGTTGATGTTTCCCTGGACAACTTGCGCACTGTTTCAGTTCCGCGTTGCAGAAGAAGGCCATCTGGTTGTTTAATCCAAGAAATGCCAAATGGTTACTCAAGGGTTATATGGGTTGAACACGTTGAGGTGGATGAAAATGCTGTCCATGACATCTACAAACCTCTTGTCAATTCTGGGATTGCATTTGGAGCAAAACGCTGGGTAGCAACTTTAGATAGACAATGTGAACGCCTTGCAAGTGTGTTGGCGCTTAACATCCCAACAGGAGATGTTGGAATCATTACTAGTCCAGCTGGTCGAAAGAGTATGCTAAAACTTGCTGAGAGAATGGTGATGAGCTTTTGTGCTGGAGTTGGTGCATCGACAACTCACATATGGACAACTTTGTCTGGAAGTGGTGCGGATGATGTTAGAGTCATGACTAGGAAGAGTATCGATGATCCAGGGAGACCTCCTGGTATTGTGCTGAGTGCTGCAACATCTTTTTGGCTTCCAGTTTCTCCTAAGAGAGTGTTTGATTTTCTCCGCGATGAGAACTCTAGAAATGAGTGGGATATTCTTTCAAATGGTGGGATTGTTCAGGAAATGGCACACATTGCAAATGGTCGTGATCCAGGAAACTGTGTTTCTCTACTCCGTGTCAATACTGGAACAAACTCTAACCAGAGTAACATGCTGATACTCCAAGAGAGCACAACTGATGTAACAGGATCTTACGTCATTTACGCTCCAGTTGATATTGCTGCAATGAACGTGGTGTTAGGTGGGGGTGACCCTGACTATGTTGCTCTGTTGCCATCTGGTTTTGCTATTCTTCCAGACGGACCGATGAATTATCATGGTGGAGGTAATTCAGAAATTGATTCTCCTGGTGGATCGCTACTAACTGTAGCATTTCAGATATTGGTTGATTCAGTCCCAACTGCAAAGCTTTCCCTTGGCTCTGTTGCGACTGTTAATAGTCTCATCAAATGCACCGTTGAAAAGATCAAAGGTGCTGTAACTTCCGCAAATGCGGCAGGTGGTCTTGGATGGGGGAGAGTTGAAAGAAGTTACAAGTTAGATGAAGGGGAAGGGAGCTAGTGGAGAAGGCAACTTAAAGGAAATCCTTGCAGGTGGTGATTGTTTTTTTGGCAAAAAAACATTTCACTATCCTGTAAGGATGTAGTTTTTTTTTGGTTTTAATATATAGGGTTTAGGGTAGACTTTGCCAATGTTATATTGGTATATGTCAAGAATATTATAAAACTAAGCTAGCAAACAAAGCTTTATTTTGTTTTGAACCCTTTTGCTTTAAGGGTTAATTGTTGGAACAAGTTAGTTCTCTATGTTTTAAAAAGAAGTTTAGTTTGACTTCTG
![]() ![]() | translated polypeptide sequence |
>Solyc02g080260.2.1 Homeobox leucine-zipper protein (AHRD V1 ***- Q8H962_ZINEL); contains Interpro domain(s) IPR002913 Lipid-binding START
MFNNHQHLLDISSSAQRTPDNELDFIRDEEFDSNSGADNMEAPNSGDDDQADPNQPPNKKKRYHRHTQNQIQEMESFYKECNHPDDKQRKELGRRLGLEPLQVKFWFQNKRTQMKAQHERCENTQLRNENEKLRAENIRYKEALSNAACPNCGGPAAIGEMSFDEHQLRIENARLRDEIDRITGIAGKYVGKSALGYSHQLPLPQPEAPRVLDLAFGPQSGLLGEMYAAGDLLRTAVTGLTDAEKPVVIELAVTAMEELIRMAQTEEPLWLPSSGSETLCEQEYARIFPRGLGPKPATLNSEASRESAVVIMNHINLVEILMDVNQWTTVFAGLVSKAMTLEVLSTGVAGNHNGALQVMTAEFQVPSPLVPTRENYFLRYCKQHGEGTWVVVDVSLDNLRTVSVPRCRRRPSGCLIQEMPNGYSRVIWVEHVEVDENAVHDIYKPLVNSGIAFGAKRWVATLDRQCERLASVLALNIPTGDVGIITSPAGRKSMLKLAERMVMSFCAGVGASTTHIWTTLSGSGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDENSRNEWDILSNGGIVQEMAHIANGRDPGNCVSLLRVNTGTNSNQSNMLILQESTTDVTGSYVIYAPVDIAAMNVVLGGGDPDYVALLPSGFAILPDGPMNYHGGGNSEIDSPGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVEKIKGAVTSANAAGGLGWGRVERSYKLDEGEGS*
MFNNHQHLLDISSSAQRTPDNELDFIRDEEFDSNSGADNMEAPNSGDDDQADPNQPPNKKKRYHRHTQNQIQEMESFYKECNHPDDKQRKELGRRLGLEPLQVKFWFQNKRTQMKAQHERCENTQLRNENEKLRAENIRYKEALSNAACPNCGGPAAIGEMSFDEHQLRIENARLRDEIDRITGIAGKYVGKSALGYSHQLPLPQPEAPRVLDLAFGPQSGLLGEMYAAGDLLRTAVTGLTDAEKPVVIELAVTAMEELIRMAQTEEPLWLPSSGSETLCEQEYARIFPRGLGPKPATLNSEASRESAVVIMNHINLVEILMDVNQWTTVFAGLVSKAMTLEVLSTGVAGNHNGALQVMTAEFQVPSPLVPTRENYFLRYCKQHGEGTWVVVDVSLDNLRTVSVPRCRRRPSGCLIQEMPNGYSRVIWVEHVEVDENAVHDIYKPLVNSGIAFGAKRWVATLDRQCERLASVLALNIPTGDVGIITSPAGRKSMLKLAERMVMSFCAGVGASTTHIWTTLSGSGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDENSRNEWDILSNGGIVQEMAHIANGRDPGNCVSLLRVNTGTNSNQSNMLILQESTTDVTGSYVIYAPVDIAAMNVVLGGGDPDYVALLPSGFAILPDGPMNYHGGGNSEIDSPGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVEKIKGAVTSANAAGGLGWGRVERSYKLDEGEGS*
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![]() ![]() | [Associate new unigene] |
Unigene ID:
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GenBank accessions | None | [Associate new genbank sequence] |
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Fine-mapping of the woolly gene controlling multicellular trichome formation and embryonic development in tomato.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (2011)
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Show / hide abstract
Trichomes are small hairs that originate from the epidermal cells of nearly all land plants, and they exist in unicellular and multicellular forms. The regulatory pathway of unicellular trichomes in Arabidopsis is well characterized. However, little is known about the multicellular trichome formation in tomato (Solanum lycopersicum). The woolly (Wo) gene controls multicellular trichome initiation and leads to embryonic lethality when homozygous in tomato. To clone and characterize Wo, the gene was fine-mapped to a DNA fragment of ~200 kb using the map-based cloning strategy. A series of sequence-based molecular markers, including simple sequence repeat, sequence characterized amplified region, and cleaved amplified polymorphic sequence were utilized in this study. Analysis of the sequence indicated that this region carries 19 putative open reading frames. These results will provide not only the important information for the isolation and characterization of Wo but also the starting point for studying the regulatory pathway responsible for trichome formation and embryonic lethality in tomato.
Yang, C. Li, H. Zhang, J. Wang, T. Ye, Z.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik.
2011.
().
.
A regulatory gene induces trichome formation and embryo lethality in tomato.
Proceedings of the National Academy of Sciences of the United States of America (2011)
Show / hide abstract
Show / hide abstract
Trichomes are universal biological structures originating from the aerial epidermis, which serve as an excellent model to study plant differentiation at the cell level. Although the pathway regulating trichome formation in the Rosids has been well characterized, only very recently a few genes were identified for trichome initiation in the Asterids. In this study, we cloned Woolly (Wo), essential for trichome formation in tomato. Transgenic experiments revealed that the woolly phenotype is caused by the mutation in Wo which encodes a homeodomain protein containing a bZIP motif and a START domain. We identified three alleles of Wo and found that each allele contains a missense mutation, which respectively results in an amino acid substitution at the C terminus. Microarray and expression analysis showed that the expression of a B-type cyclin gene, SlCycB2, is possibly regulated by Wo, which also participates in trichome formation. Suppression of Wo or SlCycB2 expression by RNAi decreased the number of type I trichomes, and direct protein-protein interaction was detected between them, implying that both proteins may work together in the regulation of this type of trichome formation. Cytological observation and Wo transcript analysis in the developing seeds showed that embryo development was also correlated with Wo.
Yang, C. Li, H. Zhang, J. Luo, Z. Gong, P. Zhang, C. Li, J. Wang, T. Zhang, Y. Lu, Y. Ye, Z.
Proceedings of the National Academy of Sciences of the United States of America.
2011.
108(29).
11836-41.
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Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
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