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Potato locus green ripe-like 1
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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| Registry name: | None | [Associate registry name] |
Notes and figures (0)
Notes and figures (0)
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| Image | Description | Type |
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Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
Accession name:
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| Alleles (0) | None | [Add new Allele] |
Associated loci (0)
Associated loci (0)
| [Associate new locus] |
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| Associated loci - graphical view | None |
SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400029941 PGSC_DMv3_219_ch08:24326867..24330888
CGATGGATTAAAAAGGAAAGTGTGTCATATAAATTGAATCAAAGTGAATATTTTTAGGTAACTTGATATTGTACAAATTCTTCTACACTTGACAGTGCAGAGTTATTAAACTCTATGGGGTCCCTCACATATTAAGGATTAACAAATTTTAATCTTGTAGCAGTGTGATACAAGAAACCTAGGAATCCAACATATTTTTGAGACAGTAAGTGCCAAAAATAAACCATGCTAAAAGAAGAAGTGAGAAAGCCAATAATGCTACCAAAAAAGGCCATCCCACCATGAAAATGCCAAAGCATACAACTAGCATAAAAGGTGAAAATGATCTCAAGATTGACATGTTGTCAACCCAATGTCCTTTGAACAATAAAAGAGCGCCAACATTGATCATGTTCCAATCCATTGATCCACCATAGCAGAGCTTGTTCAAACAATTAGCAAGAAAAGAATAGCTGTTGCAAGTGAATAAATTGTACGATTTGTGCTCAAAATGACGAACGCTTGATTGGATGGCGTCATCCCAAGAAATTGCAGACCCAAACTCTGTGTGTTTATAGCCATGCTTACATGTGTGTGCAGCAAGGTTTCGCGGAAAGCAGCACTGTCCAATTATTCAGCATTCAGAAATTCTTGTCAATACTTTGTTGGTAAGATCAAATTGGCCTATTTCTTTATGTGGGGTAACAAAGCATAGTGTTTCAGGTGGAAGTGTTGGAAGTTATATGTGAATACAAATAGTAGGGGCGATGCGTTAAGGAAGATGGGGGGAGAGGTTAGTGAGTGACATAATGCTACAACAAACAATTGAAAGGCTAAGAGCATGCCACAGTAAATTGTACCTGTTTTCTGTCTAGTTGAAGGTATTTGGCCACAGAACCTAATGCAAAATCATCAACATTAATAAAGTTGGAACCAGAAAAGGCCACGGCAGAACCATCCTCTCTGCATATTCCTACATGTCCAATGAAAGGTGCCAACCATGAGACTACTGGTAGAGGAGTCCAAACTAAACAACAGGGGAACTTAGCATTCTCTAGATTTATTTCATCAAGAGGCCAAAATTCATGCTGAATATCTTGGACTGCTCTTATGCTCTCCATTTTGTAGGCAGGTTCCAAATCCATTAAAGAAAGTCTTCCTGATGGCATATGGCGACATACAATTTTGCAGTCATGAAAAAAGGTTTCTGTGAAAAGAAAAGGAGTAAAACAAAAAATCAGTGAAAGCAGCTATAAAGAAACATTAGGTGCCAATTGCACTATGCTATACAACTGCACTAATCGATCCGCATATGTAGCATAATTGCATAAACATCCATGACTACTGATGGTTAAAAAAGTTTGAAAAATGAGTTTAGCCATTACAAAATTAATAAGACATTTCATTAGATGCAGCCCAAATTCAACAATTCCAGAAATGCAAAAGTTCTCTTGGATATCCATATAAAAAGGTGGTAACTGATCCCATTTATGCAAGCATACAGTTAAAAATGGTTTCAGCAAAACTTCCAACACAGCTTAGAATATTTAACTCTCTTTCTATAGTTTTGAATGCCCCAACTTAACATGGATTGTTAACAATGATTATATCTTCATTATGATCTGCTCTACATCTCTACTGCAACATAAGTTTTATGTCTGTTGTGTTTCTTCCATAGTATTTCTTTGCTCTCATATGTTGTATGTTGGTGATTCTTGTGAATGACTAACATTTTCTGGAACTCTTGAGTTGTTTCACAACTTCAATGACCAACGTATTTGTTTGGTGATTCTAAACCTGCACTTATAGGTTTCATTTTTCTGGATGGTAAGAGATGCTCCTTATTTTTTGGATAAGGTAAAGGTTCATTGACTATACCAAGAAGGTCCCAAAACCAAAATTTACAAAAGACTGCTGGGAATATCCATACAGTCAATTACAACATCTCTCAAGCAACTCCAAAAACTCCATATATTGATCTATATTATCAATGAAACTACTTTTACACCAACAACACAAATTATGTAAAAGATGCTCTCTAGAACTAGGCAACTAAAGAAGCACTTGATCTGCCTATAGCCTTGAATAACGACAAACAAATTATAGGAAGTGCTAAAACGTATCTTTTGTGTTTTGATCAGACCGGATGATTTCACATTATTATTTCTTCACTGATAGTCAAAATGTAATTGTAATACTAACACAGCATCCAGGAAGTGCCTGAATAGTTACAAATTACTTGAAGGGAGAGAGGCTGTTTCATATAGGCTCTTGGCTCAAAGAAAGATGCAAAAGAAAGCAGTAGGTACAAACCAAAAAAACCATAAGATGATACAATGATCAAGGCTAAAGAAACAGCCGGTAGTAACAAATAAATCTAAAAACACGAAAATACAGGAATAATACTAATGCTCCGGGATGGTGCTTAATGTATAGATCAGCAAATATCTGGACGACCTACTGCTGCATTTTCATGTGTTACCCAGTTGTGGTGAATGGAAACTGGTCCTGAGCACGTACAGTCGATAATGTTGGGCACAGTAAAGGACCTGTTACACAGATGGACCTTAGAAGAAGGAAAGAAGACGTAGGACACGAGAAATAGCCCCTTTAGCCCTTATATGGGTCCTTTGGAAGGAGAGCATGGAAGAGTTGATGATAACTTTGTATATTTGAGGAATAACCTCCTGTTTTTGGTTAATCTCTCTGACAGTTTGTAGGTTTCTCTAATTTTTGGTGTATTACTTCTACACGGAAGTTAACCCACATTAACAAGATTATTACTTCATCACAAGATTTTTTTTGTAAGTGTAATCAATAAGATGTTCTTCATTGGGATAATCTTAGTAGCTCAGGAAGTTGGATACCTGAACTTTCACCTTGTTGGTGAGGGTTCGATTCTCCACCTTGTCCCCTCCCCCATTTCCCCTTCCCCTATCCCCAATTTTTTTTAAAAAAAAGATGTTCTGCATTATCTTCGACGGATTCTGCACTAATGTAACTGCCTTATAGCTTCTTGTTGGACACTTTGACAAGTTGCTAAACTAGGACCTGATAAAAATGTATTACGGCACCCATCAATTCAAGCAGCGCAAGTGATAAGAGAATCATTAACTTCATAGTGGTTAAGACTTGCATTGCATTCCCTCCCAAAAATTCACACACATTTGCAGGCTATCTTACTAAATAACAACAACAACATACCAAGTGTTCCCACATACTGAACTCCAGGGAGGGTAGAGTGAACGCAGACCTTATTCTACCTCAGAAGTGAGACAGAGATGTTGTTGTTTCCAGTAGACCCTTACTTAAGACATAAACAAACTAGAAAAAGACACAATGAAAGTACAAGAGACAATAGGTAGTAACAAAACAACAAATAGTAACAGAACAATATTACAACCAAATAACACTACAATCAAACTACACATTTCTTACTAAATTACAATTTTGTTTTTTACCAAATTCATTTAAAGTTGATCACCAATTGAGTTAAAAGAATTGAAAAGATTTATTTGGTCAATATAGTGCTTTGCCATCTTCCCCTATCAATCAAGACAACACAAACATTCTCCAAGGTGAAATCAAAACTGTTTTTGAATTTCAAATCACCATCAACATTGTTAAATATGTTGCACAGAACCCTATCTAGCTCAAGGATAATCTGAAAAAACCAAAAAGAAAAAAGTTTTTCTATTGCTTCTAACTTCTAAGAATCTAGTGACATCAACTACATTAATGAAAAAAATCTAAAGAGCTCACAAGTCTGTATATGGCAATTAATAATCAAAACCTTAAAACCCCTTTGTCTTACTTAATCAAAAAATGAAATCTTGATGGATTCTAAGTTAAACAATGGAAGAGTAAACAAACTAAAAAATTTCAAGAATAAATGAACAAGGGGAAAATGGAACCTTCAAAATGAGGCAAGAGATCAAAGTGATGAAAACAACTTTTGCTTAGTCCTCTTCTTTGATTGATGAAACACAGAAGAAAGCAATGGGAAAGTGTGGAACATACATATAAAAAATATTCACTTTTTC
CGATGGATTAAAAAGGAAAGTGTGTCATATAAATTGAATCAAAGTGAATATTTTTAGGTAACTTGATATTGTACAAATTCTTCTACACTTGACAGTGCAGAGTTATTAAACTCTATGGGGTCCCTCACATATTAAGGATTAACAAATTTTAATCTTGTAGCAGTGTGATACAAGAAACCTAGGAATCCAACATATTTTTGAGACAGTAAGTGCCAAAAATAAACCATGCTAAAAGAAGAAGTGAGAAAGCCAATAATGCTACCAAAAAAGGCCATCCCACCATGAAAATGCCAAAGCATACAACTAGCATAAAAGGTGAAAATGATCTCAAGATTGACATGTTGTCAACCCAATGTCCTTTGAACAATAAAAGAGCGCCAACATTGATCATGTTCCAATCCATTGATCCACCATAGCAGAGCTTGTTCAAACAATTAGCAAGAAAAGAATAGCTGTTGCAAGTGAATAAATTGTACGATTTGTGCTCAAAATGACGAACGCTTGATTGGATGGCGTCATCCCAAGAAATTGCAGACCCAAACTCTGTGTGTTTATAGCCATGCTTACATGTGTGTGCAGCAAGGTTTCGCGGAAAGCAGCACTGTCCAATTATTCAGCATTCAGAAATTCTTGTCAATACTTTGTTGGTAAGATCAAATTGGCCTATTTCTTTATGTGGGGTAACAAAGCATAGTGTTTCAGGTGGAAGTGTTGGAAGTTATATGTGAATACAAATAGTAGGGGCGATGCGTTAAGGAAGATGGGGGGAGAGGTTAGTGAGTGACATAATGCTACAACAAACAATTGAAAGGCTAAGAGCATGCCACAGTAAATTGTACCTGTTTTCTGTCTAGTTGAAGGTATTTGGCCACAGAACCTAATGCAAAATCATCAACATTAATAAAGTTGGAACCAGAAAAGGCCACGGCAGAACCATCCTCTCTGCATATTCCTACATGTCCAATGAAAGGTGCCAACCATGAGACTACTGGTAGAGGAGTCCAAACTAAACAACAGGGGAACTTAGCATTCTCTAGATTTATTTCATCAAGAGGCCAAAATTCATGCTGAATATCTTGGACTGCTCTTATGCTCTCCATTTTGTAGGCAGGTTCCAAATCCATTAAAGAAAGTCTTCCTGATGGCATATGGCGACATACAATTTTGCAGTCATGAAAAAAGGTTTCTGTGAAAAGAAAAGGAGTAAAACAAAAAATCAGTGAAAGCAGCTATAAAGAAACATTAGGTGCCAATTGCACTATGCTATACAACTGCACTAATCGATCCGCATATGTAGCATAATTGCATAAACATCCATGACTACTGATGGTTAAAAAAGTTTGAAAAATGAGTTTAGCCATTACAAAATTAATAAGACATTTCATTAGATGCAGCCCAAATTCAACAATTCCAGAAATGCAAAAGTTCTCTTGGATATCCATATAAAAAGGTGGTAACTGATCCCATTTATGCAAGCATACAGTTAAAAATGGTTTCAGCAAAACTTCCAACACAGCTTAGAATATTTAACTCTCTTTCTATAGTTTTGAATGCCCCAACTTAACATGGATTGTTAACAATGATTATATCTTCATTATGATCTGCTCTACATCTCTACTGCAACATAAGTTTTATGTCTGTTGTGTTTCTTCCATAGTATTTCTTTGCTCTCATATGTTGTATGTTGGTGATTCTTGTGAATGACTAACATTTTCTGGAACTCTTGAGTTGTTTCACAACTTCAATGACCAACGTATTTGTTTGGTGATTCTAAACCTGCACTTATAGGTTTCATTTTTCTGGATGGTAAGAGATGCTCCTTATTTTTTGGATAAGGTAAAGGTTCATTGACTATACCAAGAAGGTCCCAAAACCAAAATTTACAAAAGACTGCTGGGAATATCCATACAGTCAATTACAACATCTCTCAAGCAACTCCAAAAACTCCATATATTGATCTATATTATCAATGAAACTACTTTTACACCAACAACACAAATTATGTAAAAGATGCTCTCTAGAACTAGGCAACTAAAGAAGCACTTGATCTGCCTATAGCCTTGAATAACGACAAACAAATTATAGGAAGTGCTAAAACGTATCTTTTGTGTTTTGATCAGACCGGATGATTTCACATTATTATTTCTTCACTGATAGTCAAAATGTAATTGTAATACTAACACAGCATCCAGGAAGTGCCTGAATAGTTACAAATTACTTGAAGGGAGAGAGGCTGTTTCATATAGGCTCTTGGCTCAAAGAAAGATGCAAAAGAAAGCAGTAGGTACAAACCAAAAAAACCATAAGATGATACAATGATCAAGGCTAAAGAAACAGCCGGTAGTAACAAATAAATCTAAAAACACGAAAATACAGGAATAATACTAATGCTCCGGGATGGTGCTTAATGTATAGATCAGCAAATATCTGGACGACCTACTGCTGCATTTTCATGTGTTACCCAGTTGTGGTGAATGGAAACTGGTCCTGAGCACGTACAGTCGATAATGTTGGGCACAGTAAAGGACCTGTTACACAGATGGACCTTAGAAGAAGGAAAGAAGACGTAGGACACGAGAAATAGCCCCTTTAGCCCTTATATGGGTCCTTTGGAAGGAGAGCATGGAAGAGTTGATGATAACTTTGTATATTTGAGGAATAACCTCCTGTTTTTGGTTAATCTCTCTGACAGTTTGTAGGTTTCTCTAATTTTTGGTGTATTACTTCTACACGGAAGTTAACCCACATTAACAAGATTATTACTTCATCACAAGATTTTTTTTGTAAGTGTAATCAATAAGATGTTCTTCATTGGGATAATCTTAGTAGCTCAGGAAGTTGGATACCTGAACTTTCACCTTGTTGGTGAGGGTTCGATTCTCCACCTTGTCCCCTCCCCCATTTCCCCTTCCCCTATCCCCAATTTTTTTTAAAAAAAAGATGTTCTGCATTATCTTCGACGGATTCTGCACTAATGTAACTGCCTTATAGCTTCTTGTTGGACACTTTGACAAGTTGCTAAACTAGGACCTGATAAAAATGTATTACGGCACCCATCAATTCAAGCAGCGCAAGTGATAAGAGAATCATTAACTTCATAGTGGTTAAGACTTGCATTGCATTCCCTCCCAAAAATTCACACACATTTGCAGGCTATCTTACTAAATAACAACAACAACATACCAAGTGTTCCCACATACTGAACTCCAGGGAGGGTAGAGTGAACGCAGACCTTATTCTACCTCAGAAGTGAGACAGAGATGTTGTTGTTTCCAGTAGACCCTTACTTAAGACATAAACAAACTAGAAAAAGACACAATGAAAGTACAAGAGACAATAGGTAGTAACAAAACAACAAATAGTAACAGAACAATATTACAACCAAATAACACTACAATCAAACTACACATTTCTTACTAAATTACAATTTTGTTTTTTACCAAATTCATTTAAAGTTGATCACCAATTGAGTTAAAAGAATTGAAAAGATTTATTTGGTCAATATAGTGCTTTGCCATCTTCCCCTATCAATCAAGACAACACAAACATTCTCCAAGGTGAAATCAAAACTGTTTTTGAATTTCAAATCACCATCAACATTGTTAAATATGTTGCACAGAACCCTATCTAGCTCAAGGATAATCTGAAAAAACCAAAAAGAAAAAAGTTTTTCTATTGCTTCTAACTTCTAAGAATCTAGTGACATCAACTACATTAATGAAAAAAATCTAAAGAGCTCACAAGTCTGTATATGGCAATTAATAATCAAAACCTTAAAACCCCTTTGTCTTACTTAATCAAAAAATGAAATCTTGATGGATTCTAAGTTAAACAATGGAAGAGTAAACAAACTAAAAAATTTCAAGAATAAATGAACAAGGGGAAAATGGAACCTTCAAAATGAGGCAAGAGATCAAAGTGATGAAAACAACTTTTGCTTAGTCCTCTTCTTTGATTGATGAAACACAGAAGAAAGCAATGGGAAAGTGTGGAACATACATATAAAAAATATTCACTTTTTC
| Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch08
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mRNA PGSC0003DMT400076977
mRNA PGSC0003DMT400076977
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| Ontology terms | None | terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400076977 Green ripe-like 1
GAAAAAGTGAATATTTTTTATATGTATGTTCCACACTTTCCCATTGCTTTCTTCTGTGTTTCATCAATCAAAGAAGAGGACTAAGCAAAAGTTGTTTTCATCACTTTGATCTCTTGCCTCATTTTGAAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAAGACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAGATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCTGTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATGTAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATGTTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGTGCTGCTTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGGTCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCGTACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGCTATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGACATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGCTTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTTCTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTTTCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCATAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCTAAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
GAAAAAGTGAATATTTTTTATATGTATGTTCCACACTTTCCCATTGCTTTCTTCTGTGTTTCATCAATCAAAGAAGAGGACTAAGCAAAAGTTGTTTTCATCACTTTGATCTCTTGCCTCATTTTGAAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAAGACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAGATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCTGTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATGTAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATGTTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGTGCTGCTTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGGTCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCGTACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGCTATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGACATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGCTTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTTCTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTTTCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCATAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCTAAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400076977 Green ripe-like 1
MPSGRLSLMDLEPAYKMESIRAVQDIQHEFWPLDEINLENAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINVDDFALGSVAKYLQLDRKQCCFPRNLAAHTCKHGYKHTEFGSAISWDDAIQSSVRHFEHKSYNLFTCNSYSFLANCLNKLCYGGSMDWNMINVGALLLFKGHWVDNMSILRSFSPFMLVVCFGIFMVGWPFLVALLAFSLLLLAWFIFGTYCLKNMLDS*
MPSGRLSLMDLEPAYKMESIRAVQDIQHEFWPLDEINLENAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINVDDFALGSVAKYLQLDRKQCCFPRNLAAHTCKHGYKHTEFGSAISWDDAIQSSVRHFEHKSYNLFTCNSYSFLANCLNKLCYGGSMDWNMINVGALLLFKGHWVDNMSILRSFSPFMLVVCFGIFMVGWPFLVALLAFSLLLLAWFIFGTYCLKNMLDS*
mRNA PGSC0003DMT400076978
mRNA PGSC0003DMT400076978
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| Ontology terms | None | terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400076978 Green ripe-like 1
GAAAAAGTGAATATTTTTTATATGTATGTTCCACACTTTCCCATTGCTTTCTTCTGTGTTTCATCAATCAAAGAAGAGGACTAAGCAAAAGTTGTTTTCATCACTTTGATCTCTTGCCTCATTTTGAAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAAGACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAGATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCTGTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATGTAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATGTTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGGTACAATTTACTGTGGCATGCTCTTAGCCTTTCAATTGTTTGTTGTAGCATTATGTCACTCACTAACCTCTCCCCCCATCTTCCTTAACGCATCGCCCCTACTATTTGTATTCACATATAACTTCCAACACTTCCACCTGAAACACTATGCTTTGTTACCCCACATAAAGAAATAGGCCAATTTGATCTTACCAACAAAGTATTGACAAGAATTTCTGAATGCTGAATAATTGGACAGTGCTGCTTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGGTCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCGTACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGCTATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGACATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGCTTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTTCTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTTTCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCATAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCTAAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
GAAAAAGTGAATATTTTTTATATGTATGTTCCACACTTTCCCATTGCTTTCTTCTGTGTTTCATCAATCAAAGAAGAGGACTAAGCAAAAGTTGTTTTCATCACTTTGATCTCTTGCCTCATTTTGAAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAAGACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAGATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCTGTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATGTAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATGTTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGGTACAATTTACTGTGGCATGCTCTTAGCCTTTCAATTGTTTGTTGTAGCATTATGTCACTCACTAACCTCTCCCCCCATCTTCCTTAACGCATCGCCCCTACTATTTGTATTCACATATAACTTCCAACACTTCCACCTGAAACACTATGCTTTGTTACCCCACATAAAGAAATAGGCCAATTTGATCTTACCAACAAAGTATTGACAAGAATTTCTGAATGCTGAATAATTGGACAGTGCTGCTTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGGTCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCGTACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGCTATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGACATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGCTTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTTCTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTTTCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCATAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCTAAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400076978 Green ripe-like 1
MPSGRLSLMDLEPAYKMESIRAVQDIQHEFWPLDEINLENAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINVDDFALGSVAKYLQLDRKQVQFTVACS*
MPSGRLSLMDLEPAYKMESIRAVQDIQHEFWPLDEINLENAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINVDDFALGSVAKYLQLDRKQVQFTVACS*
mRNA PGSC0003DMT400076979
mRNA PGSC0003DMT400076979
|
| Ontology terms | None | terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400076979 Green ripe-like 1
GTAATATTGTTCTGTTACTATTTGTTGTTTTGTTACTACCTATTGTCTCTTGTACTTTCATTGTGTCTTTTTCTAGTTTGTTTATGTCTTAAGTAAGGGTCTACTGGAAACAACAACATCTCTGTCTCACTTCTGAGGTAGAATAAGGTCTGCGTTCACTCTACCCTCCCTGGAGTTCAGTATGTGGGAACACTTGGTATGTTGTTGTTGTTATTTAGTAAGATAGCCTGCAAATGTGTGTGAATTTTTGGGAGGGAATGCAATGCAAGTCTTAACCACTATGAAGTTAATGATTCTCTTATCACTTGCGCTGCTTGAATTGATGGGTGCCGTAATACATTTTTATCAGGTCCTAGTTTAGCAACTTGTCAAAGTGTCCAACAAGAAGCTATAAGGCAGTTACATTAGTGCAGAATCCGTCGAAGATAATGCAGAACATCTTTTTTTTAAAAAAAATTGGGGATAGGGGAAGGGGAAATGGGGGAGGGGACAAGGTGGAGAATCGAACCCTCACCAACAAGGTGAAAGTTCAGGTATCCAACTTCCTGAGCTACTAAGATTATCCCAATGAAGAACATCTTATTGATTACACTTACAAAAAAAATCTTGTGATGAAGTAATAATCTTGTTAATGTGGGTTAACTTCCGTGTAGAAGTAATACACCAAAAATTAGAGAAACCTACAAACTGTCAGAGAGATTAACCAAAAACAGGAGGTTATTCCTCAAATATACAAAGTTATCATCAACTCTTCCATGCTCTCCTTCCAAAGGACCCATATAAGGGCTAAAGGGGCTATTTCTCGTGTCCTACGTCTTCTTTCCTTCTTCTAAGGTCCATCTGTGTAACAGGTCCTTTACTGTGCCCAACATTATCGACTGTACGTGCTCAGGACCAGTTTCCATTCACCACAACTGGGTAACACATGAAAATGCAGCAGTAGGTCGTCCAGATATTTGCTGATCTATACATTAAGCACCATCCCGGAGCATTAGTATTATTCCTGTATTTTCGTGTTTTTAGATTTATTTGTTACTACCGGCTGTTTCTTTAGCCTTGATCATTGTATCATCTTATGGTTTTTTTGGTTTGTACCTACTGCTTTCTTTTGCATCTTTCTTTGAGCCAAGAGCCTATATGAAACAGCCTCTCTCCCTTCAAGTAATTTGTAACTATTCAGGCACTTCCTGGATGCTGTGTTAGTATTACAATTACATTTTGACTATCAGTGAAGAAATAATAATGTGAAATCATCCGGTCTGATCAAAACACAAAAGATACGTTTTAGCACTTCCTATAATTTGTTTGTCGTTATTCAAGGCTATAGGCAGATCAAGTGCTTCTTTAGTTGCCTAGTTCTAGAGAGCATCTTTTACATAATTTGTGTTGTTGGTGTAAAAGTAGTTTCATTGATAATATAGATCAATATATGGAGTTTTTGGAGTTGCTTGAGAGATGTTGTAATTGACTGTATGGATATTCCCAGCAGTCTTTTGTAAATTTTGGTTTTGGGACCTTCTTGGTATAGTCAATGAACCTTTACCTTATCCAAAAAATAAGGAGCATCTCTTACCATCCAGAAAAATGAAACCTATAAGTGCAGGTTTAGAATCACCAAACAAATACGTTGGTCATTGAAGTTGTGAAACAACTCAAGAGTTCCAGAAAATGTTAGTCATTCACAAGAATCACCAACATACAACATATGAGAGCAAAGAAATACTATGGAAGAAACACAACAGACATAAAACTTATGTTGCAGTAGAGATGTAGAGCAGATCATAATGAAGATATAATCATTGTTAACAATCCATGTTAAGTTGGGGCATTCAAAACTATAGAAAGAGAGTTAAATATTCTAAGCTGTGTTGGAAGTTTTGCTGAAACCATTTTTAACTGTATGCTTGCATAAATGGGATCAGTTACCACCTTTTTATATGGATATCCAAGAGAACTTTTGCATTTCTGGAATTGTTGAATTTGGGCTGCATCTAATGAAATGTCTTATTAATTTTGTAATGGCTAAACTCATTTTTCAAACTTTTTTAACCATCAGTAGTCATGGATGTTTATGCAATTATGCTACATATGCGGATCGATTAGTGCAGTTGTATAGCATAGTGCAATTGGCACCTAATGTTTCTTTATAGCTGCTTTCACTGATTTTTTGTTTTACTCCTTTTCTTTTCACAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAAGACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAGATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCTGTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATGTAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATGTTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGGTACAATTTACTGTGGCATGCTCTTAGCCTTTCAATTGTTTGTTGTAGCATTATGTCACTCACTAACCTCTCCCCCCATCTTCCTTAACGCATCGCCCCTACTATTTGTATTCACATATAACTTCCAACACTTCCACCTGAAACACTATGCTTTGTTACCCCACATAAAGAAATAGGCCAATTTGATCTTACCAACAAAGTATTGACAAGAATTTCTGAATGCTGAATAATTGGACAGTGCTGCTTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGGTCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCGTACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGCTATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGACATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGCTTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTTCTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTTTCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCATAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCTAAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
GTAATATTGTTCTGTTACTATTTGTTGTTTTGTTACTACCTATTGTCTCTTGTACTTTCATTGTGTCTTTTTCTAGTTTGTTTATGTCTTAAGTAAGGGTCTACTGGAAACAACAACATCTCTGTCTCACTTCTGAGGTAGAATAAGGTCTGCGTTCACTCTACCCTCCCTGGAGTTCAGTATGTGGGAACACTTGGTATGTTGTTGTTGTTATTTAGTAAGATAGCCTGCAAATGTGTGTGAATTTTTGGGAGGGAATGCAATGCAAGTCTTAACCACTATGAAGTTAATGATTCTCTTATCACTTGCGCTGCTTGAATTGATGGGTGCCGTAATACATTTTTATCAGGTCCTAGTTTAGCAACTTGTCAAAGTGTCCAACAAGAAGCTATAAGGCAGTTACATTAGTGCAGAATCCGTCGAAGATAATGCAGAACATCTTTTTTTTAAAAAAAATTGGGGATAGGGGAAGGGGAAATGGGGGAGGGGACAAGGTGGAGAATCGAACCCTCACCAACAAGGTGAAAGTTCAGGTATCCAACTTCCTGAGCTACTAAGATTATCCCAATGAAGAACATCTTATTGATTACACTTACAAAAAAAATCTTGTGATGAAGTAATAATCTTGTTAATGTGGGTTAACTTCCGTGTAGAAGTAATACACCAAAAATTAGAGAAACCTACAAACTGTCAGAGAGATTAACCAAAAACAGGAGGTTATTCCTCAAATATACAAAGTTATCATCAACTCTTCCATGCTCTCCTTCCAAAGGACCCATATAAGGGCTAAAGGGGCTATTTCTCGTGTCCTACGTCTTCTTTCCTTCTTCTAAGGTCCATCTGTGTAACAGGTCCTTTACTGTGCCCAACATTATCGACTGTACGTGCTCAGGACCAGTTTCCATTCACCACAACTGGGTAACACATGAAAATGCAGCAGTAGGTCGTCCAGATATTTGCTGATCTATACATTAAGCACCATCCCGGAGCATTAGTATTATTCCTGTATTTTCGTGTTTTTAGATTTATTTGTTACTACCGGCTGTTTCTTTAGCCTTGATCATTGTATCATCTTATGGTTTTTTTGGTTTGTACCTACTGCTTTCTTTTGCATCTTTCTTTGAGCCAAGAGCCTATATGAAACAGCCTCTCTCCCTTCAAGTAATTTGTAACTATTCAGGCACTTCCTGGATGCTGTGTTAGTATTACAATTACATTTTGACTATCAGTGAAGAAATAATAATGTGAAATCATCCGGTCTGATCAAAACACAAAAGATACGTTTTAGCACTTCCTATAATTTGTTTGTCGTTATTCAAGGCTATAGGCAGATCAAGTGCTTCTTTAGTTGCCTAGTTCTAGAGAGCATCTTTTACATAATTTGTGTTGTTGGTGTAAAAGTAGTTTCATTGATAATATAGATCAATATATGGAGTTTTTGGAGTTGCTTGAGAGATGTTGTAATTGACTGTATGGATATTCCCAGCAGTCTTTTGTAAATTTTGGTTTTGGGACCTTCTTGGTATAGTCAATGAACCTTTACCTTATCCAAAAAATAAGGAGCATCTCTTACCATCCAGAAAAATGAAACCTATAAGTGCAGGTTTAGAATCACCAAACAAATACGTTGGTCATTGAAGTTGTGAAACAACTCAAGAGTTCCAGAAAATGTTAGTCATTCACAAGAATCACCAACATACAACATATGAGAGCAAAGAAATACTATGGAAGAAACACAACAGACATAAAACTTATGTTGCAGTAGAGATGTAGAGCAGATCATAATGAAGATATAATCATTGTTAACAATCCATGTTAAGTTGGGGCATTCAAAACTATAGAAAGAGAGTTAAATATTCTAAGCTGTGTTGGAAGTTTTGCTGAAACCATTTTTAACTGTATGCTTGCATAAATGGGATCAGTTACCACCTTTTTATATGGATATCCAAGAGAACTTTTGCATTTCTGGAATTGTTGAATTTGGGCTGCATCTAATGAAATGTCTTATTAATTTTGTAATGGCTAAACTCATTTTTCAAACTTTTTTAACCATCAGTAGTCATGGATGTTTATGCAATTATGCTACATATGCGGATCGATTAGTGCAGTTGTATAGCATAGTGCAATTGGCACCTAATGTTTCTTTATAGCTGCTTTCACTGATTTTTTGTTTTACTCCTTTTCTTTTCACAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAAGACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAGATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCTGTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATGTAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATGTTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGGTACAATTTACTGTGGCATGCTCTTAGCCTTTCAATTGTTTGTTGTAGCATTATGTCACTCACTAACCTCTCCCCCCATCTTCCTTAACGCATCGCCCCTACTATTTGTATTCACATATAACTTCCAACACTTCCACCTGAAACACTATGCTTTGTTACCCCACATAAAGAAATAGGCCAATTTGATCTTACCAACAAAGTATTGACAAGAATTTCTGAATGCTGAATAATTGGACAGTGCTGCTTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGGTCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCGTACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGCTATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGACATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGCTTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTTCTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTTTCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCATAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCTAAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400076979 Green ripe-like 1
MPSGRLSLMDLEPAYKMESIRAVQDIQHEFWPLDEINLENAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINVDDFALGSVAKYLQLDRKQVQFTVACS*
MPSGRLSLMDLEPAYKMESIRAVQDIQHEFWPLDEINLENAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINVDDFALGSVAKYLQLDRKQVQFTVACS*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
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GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
DQ372900 Solanum tuberosum green ripe-like 1 mRNA, complete cds.
| Other genome matches | None |
Literature annotations [1]
Literature annotations [1]
| [Associate publication] [Matching publications] |
Ripening in the tomato Green-ripe mutant is inhibited by ectopic expression of a protein that disrupts ethylene signaling.
Proceedings of the National Academy of Sciences of the United States of America (2006)
Show / hide abstract
Show / hide abstract
To achieve full ripening, climacteric fruits, such as tomato require synthesis, perception and signal transduction of the plant hormone ethylene. The nonripening phenotype of the dominant Green-ripe (Gr) and Never-ripe 2 (Nr-2) mutants of tomato is the result of reduced ethylene responsiveness in fruit tissues. In addition, a subset of ethylene responses associated with floral senescence, abscission, and root elongation are also impacted in mutant plants, but to a lesser extent. Using positional cloning, we have identified an identical 334-bp deletion in a gene of unknown biochemical function at the Gr/Nr-2 locus. Consistent with a dominant gain of function mutation, this deletion causes ectopic expression of Gr/Nr-2, which in turn leads to ripening inhibition. A CaMV35::GR transgene recreates the Gr/Nr-2 mutant phenotype but does not lead to a global reduction in ethylene responsiveness, suggesting tissue-specific modulation of ethylene responses in tomato. Gr/Nr-2 encodes an evolutionary conserved protein of unknown biochemical function that we associate here with ethylene signaling. Because Gr/Nr-2 has no sequence homology with the previously described Nr (Never-ripe) ethylene receptor of tomato we now refer to this gene only as GR. Identification of GR expands the current repertoire of ethylene signaling components in plants and provides a tool for further elucidation of ethylene response mechanisms and for controlling ethylene signal specificity in crop plants.
Barry, CS. Giovannoni, JJ.
Proceedings of the National Academy of Sciences of the United States of America.
2006.
103(20).
7923-8.
Ontology annotations (4)
Ontology annotations (4)
| [Add ontology annotations] |
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