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Tomato locus gibberellin 2-oxidase 1
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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| Registry name: | None | [Associate registry name] |
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| Image | Description | Type |
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Accessions and images (0)
| [Associate accession] |
Accession name:
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| Alleles (0) | None | [Add new Allele] |
Associated loci (0)
Associated loci (0)
| [Associate new locus] |
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| Associated loci - graphical view | None |
SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc05g053340.2 SL2.50ch05:63472203..63465548 (sequence from reverse strand)
TAATATAATATATAAATATACACACATTATTAATTCTCTTCATAATTCTCTTTCATCTTATCATAATTATAATTCCTCAACTTCCAACATGGTTTCTGAAAAAATTCAAGAAAATATTAAACTTCCAATCATTGACCTTTCATTAGAGAAATCACAAATATTAAAACTCATAGTGAAAGCCTCTGAAGAATTTGGTTTTTTCAAAGTTATTAACCATGGTGTTGACACAAATGTTATAAAAAAAATGGAAGATGAAAGTTATAATTTTTTTTCCAAATCTTTTTCTCAAAAACAATGTGCTGGTCCAGCAAATCCATATGGTTATGGTTGCAAAAATATAGGGTTTAATGGAGATAATGGTGAAGTTGAATATTTGTTACTTCATGCCAATCCTAATATGTCCATCTCTCAAATATCAAAAAATATTTCAAGTGATCCACTAATGTTCAGGTACCTTCAAACTTTGGTTTAACTTATTATTAAGTTATATACACTGTCAGTATGATGATCAGATGTCTCATGTATCCAGATAAGTTTTCTTATCAAACTGTGAGATTCGTAATTTTGAAAATAAGATGTGTTATGTTTCATGTATCCATATAAGTTTTCTTATTATCAAACTGTGAGATTCGTAATTTTGAGAATAAGACATGTTATATAGTGTAACAAGTAGAGATGACAGACATGATAGTGTGAAATTTTCGTAAACTAATAATGTATATGTAACTTAAACTATTAAAAGATTGAGAGTTTTCTGTCGATTTTAAAAAGAATGATTTTCGTATCGAAAAATTCTTTCATATTGAACTTTTTGTTTTACCTTCGATAACATATGTTCTTTGAGGATTTTTTTTTATGTATATTTTGAATTTTTTTGTTTTTAAAATTTTGGTATGCAATTAAATATTATTAGAGTAAAATCTCATTTATGTGAGTTGGAGAGAGATATATGTTTAGCAATAATATTATGTTAGTAAAATAATATATGGTTTAGTTGGATCATGTATATAAGACTTCGATTATATGGTATTAGCAGATTTGAAAAATAATTAGCTAGTATAAGTTTTGTTAGTACTTTTCATGAACCTTAATTGGATATTTTTATATTAATTTTAATTTTAATTTATAGTGGAAATCTATTTTTATTCATAAACTTGATTGAATCTCATTAAATGTTTTATATTTTTTTATTATATGTTTTGTGCATAATTGATTGTGTGCTAGTTAACTTGTAATAAAGTTAAATTGTTACTACTTGTACAATTTAAGAGGATTAGGAAGTTGAAGAATATTAACTTGTATCATGTTAGCTTGTGAGTTTGATATTTTATATATTCACCCAACTAATAATTACTTTCCCGTTTCAAAAAGAATAACCTGTTTTTTTTCGTCTGTTTAAAAAAGAATGATTTTTTTCTATTTTGGTAATATTTTAATTTAAACTTTACACGTGACATGTTTAAGAGCACAAGATCAAAGGACAATTTTGTACATTTAACTTATTTTTAATTTAGAACCACAAGATCGAAAAGTCTTCTTTATTATTCTTAAACTCCGTGTCAAGTCAAACCAAGTCATTTTTTATGAAACGGAGGGAGTATTATTTTATAAAAATTATTGTTTCTTATTTAAGAAAATGAAAATGACTATTGAAATAATAACATTATCATGCACCCTAGGATGTCGTGACTTAGTTGTCAATGTAATGATTGGGAACCGTTCAAAATTCAGCGAAAACAAAAAAAAAACTAGATAAATTCTTCTCATCTATCATAGGACAGAGTTATCTGATATCTGTTATGGTGGAAACTGATATTAATCGCATAAAATTAATTAAAATACATAAAAATTTATCCGAACAACACAATAATTTTTTATTTTTTTTTAAATAAAAGACACTATGAGTAGAGTGATATGAACATTGTTATTTGTCAATTTAGGAATAAAAATAAATAGAATGAGTAGTAACCATATAGTACATATATATGTCAATTTGTGCTAGTTTGTGTTTGGGAATTGTTTGGTTGTTCCAGCTGTAACAACTTTGAACCTGACTCACTATGTTTGATCTTTTTAAGGGAATCCTACTAGGTACACATTCACTTCAATTTCAAAAAAACATCATGTAAATCTTGTCTATACATATATCATCGATCTTTCTGTTTCGATTTGTTTGTTTTGTTTTGATTTTGTATGAAGTTAACGAGAATGAAGAGAACTTTTGAATCTTGTGAAATTAAACTAAAGATATGTAAAATATTAAATTAGTTGCGTCGAAGTTATACTGAATAGGGTGTATTAGTAATGATAAGATTAGTTATGCTAAGTTGCTAACATAATTTCTTATCTACTGTTTAATTTGTTGTATTAAAATGGATTAGGGTATATTAGAATAGAAATTATAGGATGAATTAGAATAAAAATAATACTTTTGTATGGTAGATGACATGGTTACTAGGTATATAAAAATAATATTGAATAAAATATATTTAGATATATAATTAGTTATACATAGGTTGAAAACACTATCAAATAAAGAATTAAATAAATACCAAATTAAGTTGGTACGTGTATTATATTCTTTCTAATATATATCACACACAACCATCCCTAAAGGTTGCACCGATGGAGTTTAAATTCTAATTACATCTTCGACGGAGATGAATGAGTCTGAATCATAATCGAACATGACACATACTTAATGAACTTTGTTAAGAAATAAACTTACCTTGCTATCAGATACCACTCCAGCCATAGTAGCGTACTCATAATTCTAACATATTATATCCGAGTCAAGATCATTATAAATTCGATTATTATTGAGTAACACCAAACTTATGCCTAAGGCAAGGCTCAAATGATAAGATGGGGCAAGGGTCAAACATTACTTATTGTAATAGTAAATCATGTCTATTACGTGTTTTAGATACAAATTTCCAAAAACTTTTAGAATTATGAATCGTATTATTTTAATATATTTCGTACTCAAGAACTATCTCGATTTATCTCATATATCAAACAACCCCTTTAACATGAGGCTCCTAGCATATGGGAGTTGGGGGCACAATAGGCATTTGTGTTTATCCATAACTACAAAATCTATAATAATAATTGAATGATTGATATGATGTGCTTGTGATAGTTGATCATCCTATTTACACAGTAAAAGTTATGTACTCATGAAAATAACATTTTATTTATTAATTATTAAAGATGATTGCCAAGTGACTATACATCTATCAACAAATTAAAGTCTAATTACATCATGATGTGATAATATTTAATTTATTTGACTTTTTGATTTGAAATATGCTATTTCAAATATGTTATATATTATAACAATATATTTAATATTATTTATAAAGTAAAGCTCGCAGAGAATAGTGTATATACATATATTATCTCTAGCTACTTTATTAGATAATTCAAGATAAAAACAATCTAAAAAAGAGTTAACATGAAGTAGTTAAAATTAAAATAATACCCCTTCTGTCTCATTTTATATGAGTTAATTTTACTCAGTATGAAGTTTAAAAATTTCTTCTTTTTTTTTGGGAAATTTGTGATCTAAAATAAGTAATAATCGATATTTTTGTGATTATAAATCATTTCATTTAGGGATAAAATTGACATTTAAAGCTAAATTGTTACTTAATATAGAATCGTGTCATTCTTTTTCTAATTGATTAAAAAGAAAAATAAGTCAGATGAAGTAATAGATAGTAGCAGAACAATGCTGCAACAAAAAAATAATTTCTATAATCAAGCTACGTGAAACAACAAATATATAGTAACAGAAAACGAAAAAACCAAAAATTACAAATACAATACTACAATTGTTAGTAAGGACGTACAATAAGACAATGTACACATACCTACTAGTATGAATGTATTTCTACTTATTAATTTTCTACCGTAATTCATATTTTTATATTTTTTTCAATAAACGTTAAAATTATTAAATTCTATCGAACTCGTAAAATGACAGTTGTGCAGTAAATGGATATGTAAAATCAGTGAGGGAGTTGGCATGTAAGATATTAGAATTGATGGCACAAGGATTAAGGGTCCAACAAACTTCAGTCTACAGTAATCTTCTCATGGACCTTCATTCTGATTCTCTACTACGGATTAATCACTACCCTCCATTCAACTGGACCCCACATCTTCTCCATCATGATTGTGACACGTCACCTAACTCTTGCAACTCCACGGTAAGTAAAATTGGATTTGGAGAGCATACAGACCCTCAGATCTTGACCATCTTAAGATCAAACGATGCTCCTGGCCTACAAATATCAACTCAACAAGGATTGTGGGTCCCCGTATCACCTCACCCGAATACTGCTTTTTCCATCTTCGTTGGAGACACTTTACAGGTCAGTAATTTCTTTCATCTTATCATTATAATTTTTTTTTACGAAAAATATAAAATATATCGTTGATCGAATGTATGTTAAATTCCTTGAAAATAATGTACTTTGTAAGCTATGGCACAAATATTATCTGAATACATGAAATTAACTACAAAATATATCGATAATCCATAACTTATATGTAGCTTAAATAGACTCTAGTTAAATTGGATGTTTTTATAATTTGTTGAATTTTACTTTTTGCTAAATCCTTACTTTTTAGTAGTGAAATACGATAATATTTATGAAAAAATTGAGTATAATGGATAAATTTTATCTTGACTATTATTATGATATATAATTCAGCATATTTGATCTGTAATTAATTAAAATGAATATTATTATTCTTTTAATATATTTGCAAAATTGCAAATAGATCAAACTAAATATATTTAGTTAGATATTATAAAGACTAAATCAATCCTCGAGTAACATAGAAATTGAGTATTCAATTTTATTTGAGTGTATTGGACCTTCAACAAGTTATGATTCGTGTGTTAGCGGGTCAATTCATATTGTTTAGAGGACGATTTTGTCAATCGATATAACTTTATAATGTTGTGATCATCATAGAGACTGTGATTAAATGGACACAGACTTTATGATGAAAGAATTTCTTTCTTAATAATAGTGTGCTAAAGAAACTCGAATAAATGAACCTATCAACATCATAGTAATTCTTGACTTATTTGAGGTAACACAATGTGGTCCTTACTCCACAATACTTCATGAGATGTTGAGCCCATTCTTTCTTCAAATAATGCATATCACTTTTCTATTCCGTTTAACTATACTTTATTTTAATTTGTTCGATATATTTTTAACTTTATGTTATTTCAAAACTTATATATATATATATAATGATATCATGTTTTAAATATCTCACCTTATTTTAATTAAAAGATATATGAAATCTCATTACTAATCACTTAGAAGGATAGTTTTCATATATGTGATTTAGATGTCGATTTTTTTTTTTGGATTCTTTTAATTCCTTATTGTTTTGATTAATCGTAAAACTAATTAAGTCTTGTTTCTTAAAACTTACTCAAGGTTCTAGTGTCATTTTATTAACAATCAATTATTTTGAATTTCGATTAAATTAATTTTATCTTAGCTTCACCCTAATAATTTGGAATATAATTTCTAATAAGGAAAAGAGTCAATAGAATGTTATCTTATGCTTTGATAGTGACAAAGCCAACTAGCTGAGCTGATTGGACCCCTTTAATTAATCAATCAATCAATCAACCAAATCAAACTTGAATTTTAATCGATACCCATTAATATTTTTAGATTCGGTATTCAGATAAATAGCACGACGTAAAGAATTGCTTTCATTATCTTAATAAAATAATTCATAGCCATATAAATTGTCAAAGACCATTTTATATCATATATTAAATTAAATCATGTCACATAAATTAAAATACGAAATACTAATACTAGTAGGTAGAAGTAGTACTCGTGCATAGTTATCATAACCCCACCCCTCATGATAAAAAATAAAAGCAAAGAAATGAAGTATGTATGTAGACCTAAGTGAAAGCTACATGTGCTTTGGGAGCCAAAAATTGAACTCATACACTGCAAATATTCAGTGTCACTTCATTGGGGGGTTTTAGATGCCCAACTATTGGTTACTATGTAAGATTCTACTTGATAATAACTCATCACTTTCAAATTTTGGAGGGTCCATCGATTTCGTCTGGTTGAATGTATTAGAGAAATTAATATATGTACTTGTCATGATAATTCGATATTATAGAGTATTATTGTAGAACTGTCTTTCATAATCTATTATAAAAAGATCTAATTAGGAGCGTAGTTAGTAGTTTGTTGCTCAAATAATATATTTATGTTACGAGTAAAATTATCATTGTGAAATTGAGAATCTATAAAGTTGAAATTTTAAATATCACGTTTGATTCTGATTGTGTGTAGGCTCTGACAAATGGAAGGTTTAAGAGTGTGAGGCATAGGGCCATGGTGAATTCATGCAAACCTAGGATGTCAATGGTGTACTTTGGTGCCCCATCACCCCATGCTAGAATTTGTTGTCCCTTAGAATTGGTCACTACAACACCACACAAACCTTATCATCTATATAGGCCATTCACTTGGGGTGAGTACAAGAAAGCTACTTATTCGATGAGACTTGGGGACACTCGTCTTGATCAATTTTTCAGACTACAATCAGAAAATGATGAAACAATAACTATTAATAATCAAACGTCTTAA
TAATATAATATATAAATATACACACATTATTAATTCTCTTCATAATTCTCTTTCATCTTATCATAATTATAATTCCTCAACTTCCAACATGGTTTCTGAAAAAATTCAAGAAAATATTAAACTTCCAATCATTGACCTTTCATTAGAGAAATCACAAATATTAAAACTCATAGTGAAAGCCTCTGAAGAATTTGGTTTTTTCAAAGTTATTAACCATGGTGTTGACACAAATGTTATAAAAAAAATGGAAGATGAAAGTTATAATTTTTTTTCCAAATCTTTTTCTCAAAAACAATGTGCTGGTCCAGCAAATCCATATGGTTATGGTTGCAAAAATATAGGGTTTAATGGAGATAATGGTGAAGTTGAATATTTGTTACTTCATGCCAATCCTAATATGTCCATCTCTCAAATATCAAAAAATATTTCAAGTGATCCACTAATGTTCAGGTACCTTCAAACTTTGGTTTAACTTATTATTAAGTTATATACACTGTCAGTATGATGATCAGATGTCTCATGTATCCAGATAAGTTTTCTTATCAAACTGTGAGATTCGTAATTTTGAAAATAAGATGTGTTATGTTTCATGTATCCATATAAGTTTTCTTATTATCAAACTGTGAGATTCGTAATTTTGAGAATAAGACATGTTATATAGTGTAACAAGTAGAGATGACAGACATGATAGTGTGAAATTTTCGTAAACTAATAATGTATATGTAACTTAAACTATTAAAAGATTGAGAGTTTTCTGTCGATTTTAAAAAGAATGATTTTCGTATCGAAAAATTCTTTCATATTGAACTTTTTGTTTTACCTTCGATAACATATGTTCTTTGAGGATTTTTTTTTATGTATATTTTGAATTTTTTTGTTTTTAAAATTTTGGTATGCAATTAAATATTATTAGAGTAAAATCTCATTTATGTGAGTTGGAGAGAGATATATGTTTAGCAATAATATTATGTTAGTAAAATAATATATGGTTTAGTTGGATCATGTATATAAGACTTCGATTATATGGTATTAGCAGATTTGAAAAATAATTAGCTAGTATAAGTTTTGTTAGTACTTTTCATGAACCTTAATTGGATATTTTTATATTAATTTTAATTTTAATTTATAGTGGAAATCTATTTTTATTCATAAACTTGATTGAATCTCATTAAATGTTTTATATTTTTTTATTATATGTTTTGTGCATAATTGATTGTGTGCTAGTTAACTTGTAATAAAGTTAAATTGTTACTACTTGTACAATTTAAGAGGATTAGGAAGTTGAAGAATATTAACTTGTATCATGTTAGCTTGTGAGTTTGATATTTTATATATTCACCCAACTAATAATTACTTTCCCGTTTCAAAAAGAATAACCTGTTTTTTTTCGTCTGTTTAAAAAAGAATGATTTTTTTCTATTTTGGTAATATTTTAATTTAAACTTTACACGTGACATGTTTAAGAGCACAAGATCAAAGGACAATTTTGTACATTTAACTTATTTTTAATTTAGAACCACAAGATCGAAAAGTCTTCTTTATTATTCTTAAACTCCGTGTCAAGTCAAACCAAGTCATTTTTTATGAAACGGAGGGAGTATTATTTTATAAAAATTATTGTTTCTTATTTAAGAAAATGAAAATGACTATTGAAATAATAACATTATCATGCACCCTAGGATGTCGTGACTTAGTTGTCAATGTAATGATTGGGAACCGTTCAAAATTCAGCGAAAACAAAAAAAAAACTAGATAAATTCTTCTCATCTATCATAGGACAGAGTTATCTGATATCTGTTATGGTGGAAACTGATATTAATCGCATAAAATTAATTAAAATACATAAAAATTTATCCGAACAACACAATAATTTTTTATTTTTTTTTAAATAAAAGACACTATGAGTAGAGTGATATGAACATTGTTATTTGTCAATTTAGGAATAAAAATAAATAGAATGAGTAGTAACCATATAGTACATATATATGTCAATTTGTGCTAGTTTGTGTTTGGGAATTGTTTGGTTGTTCCAGCTGTAACAACTTTGAACCTGACTCACTATGTTTGATCTTTTTAAGGGAATCCTACTAGGTACACATTCACTTCAATTTCAAAAAAACATCATGTAAATCTTGTCTATACATATATCATCGATCTTTCTGTTTCGATTTGTTTGTTTTGTTTTGATTTTGTATGAAGTTAACGAGAATGAAGAGAACTTTTGAATCTTGTGAAATTAAACTAAAGATATGTAAAATATTAAATTAGTTGCGTCGAAGTTATACTGAATAGGGTGTATTAGTAATGATAAGATTAGTTATGCTAAGTTGCTAACATAATTTCTTATCTACTGTTTAATTTGTTGTATTAAAATGGATTAGGGTATATTAGAATAGAAATTATAGGATGAATTAGAATAAAAATAATACTTTTGTATGGTAGATGACATGGTTACTAGGTATATAAAAATAATATTGAATAAAATATATTTAGATATATAATTAGTTATACATAGGTTGAAAACACTATCAAATAAAGAATTAAATAAATACCAAATTAAGTTGGTACGTGTATTATATTCTTTCTAATATATATCACACACAACCATCCCTAAAGGTTGCACCGATGGAGTTTAAATTCTAATTACATCTTCGACGGAGATGAATGAGTCTGAATCATAATCGAACATGACACATACTTAATGAACTTTGTTAAGAAATAAACTTACCTTGCTATCAGATACCACTCCAGCCATAGTAGCGTACTCATAATTCTAACATATTATATCCGAGTCAAGATCATTATAAATTCGATTATTATTGAGTAACACCAAACTTATGCCTAAGGCAAGGCTCAAATGATAAGATGGGGCAAGGGTCAAACATTACTTATTGTAATAGTAAATCATGTCTATTACGTGTTTTAGATACAAATTTCCAAAAACTTTTAGAATTATGAATCGTATTATTTTAATATATTTCGTACTCAAGAACTATCTCGATTTATCTCATATATCAAACAACCCCTTTAACATGAGGCTCCTAGCATATGGGAGTTGGGGGCACAATAGGCATTTGTGTTTATCCATAACTACAAAATCTATAATAATAATTGAATGATTGATATGATGTGCTTGTGATAGTTGATCATCCTATTTACACAGTAAAAGTTATGTACTCATGAAAATAACATTTTATTTATTAATTATTAAAGATGATTGCCAAGTGACTATACATCTATCAACAAATTAAAGTCTAATTACATCATGATGTGATAATATTTAATTTATTTGACTTTTTGATTTGAAATATGCTATTTCAAATATGTTATATATTATAACAATATATTTAATATTATTTATAAAGTAAAGCTCGCAGAGAATAGTGTATATACATATATTATCTCTAGCTACTTTATTAGATAATTCAAGATAAAAACAATCTAAAAAAGAGTTAACATGAAGTAGTTAAAATTAAAATAATACCCCTTCTGTCTCATTTTATATGAGTTAATTTTACTCAGTATGAAGTTTAAAAATTTCTTCTTTTTTTTTGGGAAATTTGTGATCTAAAATAAGTAATAATCGATATTTTTGTGATTATAAATCATTTCATTTAGGGATAAAATTGACATTTAAAGCTAAATTGTTACTTAATATAGAATCGTGTCATTCTTTTTCTAATTGATTAAAAAGAAAAATAAGTCAGATGAAGTAATAGATAGTAGCAGAACAATGCTGCAACAAAAAAATAATTTCTATAATCAAGCTACGTGAAACAACAAATATATAGTAACAGAAAACGAAAAAACCAAAAATTACAAATACAATACTACAATTGTTAGTAAGGACGTACAATAAGACAATGTACACATACCTACTAGTATGAATGTATTTCTACTTATTAATTTTCTACCGTAATTCATATTTTTATATTTTTTTCAATAAACGTTAAAATTATTAAATTCTATCGAACTCGTAAAATGACAGTTGTGCAGTAAATGGATATGTAAAATCAGTGAGGGAGTTGGCATGTAAGATATTAGAATTGATGGCACAAGGATTAAGGGTCCAACAAACTTCAGTCTACAGTAATCTTCTCATGGACCTTCATTCTGATTCTCTACTACGGATTAATCACTACCCTCCATTCAACTGGACCCCACATCTTCTCCATCATGATTGTGACACGTCACCTAACTCTTGCAACTCCACGGTAAGTAAAATTGGATTTGGAGAGCATACAGACCCTCAGATCTTGACCATCTTAAGATCAAACGATGCTCCTGGCCTACAAATATCAACTCAACAAGGATTGTGGGTCCCCGTATCACCTCACCCGAATACTGCTTTTTCCATCTTCGTTGGAGACACTTTACAGGTCAGTAATTTCTTTCATCTTATCATTATAATTTTTTTTTACGAAAAATATAAAATATATCGTTGATCGAATGTATGTTAAATTCCTTGAAAATAATGTACTTTGTAAGCTATGGCACAAATATTATCTGAATACATGAAATTAACTACAAAATATATCGATAATCCATAACTTATATGTAGCTTAAATAGACTCTAGTTAAATTGGATGTTTTTATAATTTGTTGAATTTTACTTTTTGCTAAATCCTTACTTTTTAGTAGTGAAATACGATAATATTTATGAAAAAATTGAGTATAATGGATAAATTTTATCTTGACTATTATTATGATATATAATTCAGCATATTTGATCTGTAATTAATTAAAATGAATATTATTATTCTTTTAATATATTTGCAAAATTGCAAATAGATCAAACTAAATATATTTAGTTAGATATTATAAAGACTAAATCAATCCTCGAGTAACATAGAAATTGAGTATTCAATTTTATTTGAGTGTATTGGACCTTCAACAAGTTATGATTCGTGTGTTAGCGGGTCAATTCATATTGTTTAGAGGACGATTTTGTCAATCGATATAACTTTATAATGTTGTGATCATCATAGAGACTGTGATTAAATGGACACAGACTTTATGATGAAAGAATTTCTTTCTTAATAATAGTGTGCTAAAGAAACTCGAATAAATGAACCTATCAACATCATAGTAATTCTTGACTTATTTGAGGTAACACAATGTGGTCCTTACTCCACAATACTTCATGAGATGTTGAGCCCATTCTTTCTTCAAATAATGCATATCACTTTTCTATTCCGTTTAACTATACTTTATTTTAATTTGTTCGATATATTTTTAACTTTATGTTATTTCAAAACTTATATATATATATATAATGATATCATGTTTTAAATATCTCACCTTATTTTAATTAAAAGATATATGAAATCTCATTACTAATCACTTAGAAGGATAGTTTTCATATATGTGATTTAGATGTCGATTTTTTTTTTTGGATTCTTTTAATTCCTTATTGTTTTGATTAATCGTAAAACTAATTAAGTCTTGTTTCTTAAAACTTACTCAAGGTTCTAGTGTCATTTTATTAACAATCAATTATTTTGAATTTCGATTAAATTAATTTTATCTTAGCTTCACCCTAATAATTTGGAATATAATTTCTAATAAGGAAAAGAGTCAATAGAATGTTATCTTATGCTTTGATAGTGACAAAGCCAACTAGCTGAGCTGATTGGACCCCTTTAATTAATCAATCAATCAATCAACCAAATCAAACTTGAATTTTAATCGATACCCATTAATATTTTTAGATTCGGTATTCAGATAAATAGCACGACGTAAAGAATTGCTTTCATTATCTTAATAAAATAATTCATAGCCATATAAATTGTCAAAGACCATTTTATATCATATATTAAATTAAATCATGTCACATAAATTAAAATACGAAATACTAATACTAGTAGGTAGAAGTAGTACTCGTGCATAGTTATCATAACCCCACCCCTCATGATAAAAAATAAAAGCAAAGAAATGAAGTATGTATGTAGACCTAAGTGAAAGCTACATGTGCTTTGGGAGCCAAAAATTGAACTCATACACTGCAAATATTCAGTGTCACTTCATTGGGGGGTTTTAGATGCCCAACTATTGGTTACTATGTAAGATTCTACTTGATAATAACTCATCACTTTCAAATTTTGGAGGGTCCATCGATTTCGTCTGGTTGAATGTATTAGAGAAATTAATATATGTACTTGTCATGATAATTCGATATTATAGAGTATTATTGTAGAACTGTCTTTCATAATCTATTATAAAAAGATCTAATTAGGAGCGTAGTTAGTAGTTTGTTGCTCAAATAATATATTTATGTTACGAGTAAAATTATCATTGTGAAATTGAGAATCTATAAAGTTGAAATTTTAAATATCACGTTTGATTCTGATTGTGTGTAGGCTCTGACAAATGGAAGGTTTAAGAGTGTGAGGCATAGGGCCATGGTGAATTCATGCAAACCTAGGATGTCAATGGTGTACTTTGGTGCCCCATCACCCCATGCTAGAATTTGTTGTCCCTTAGAATTGGTCACTACAACACCACACAAACCTTATCATCTATATAGGCCATTCACTTGGGGTGAGTACAAGAAAGCTACTTATTCGATGAGACTTGGGGACACTCGTCTTGATCAATTTTTCAGACTACAATCAGAAAATGATGAAACAATAACTATTAATAATCAAACGTCTTAA
| Download sequence region |
Get flanking sequences on SL2.50ch05
|
mRNA Solyc05g053340.2.1
mRNA Solyc05g053340.2.1
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Ontology terms
Ontology terms
| terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc05g053340.2.1 Gibberellin 2-oxidase (AHRD V1 **** A4GVL5_SOLLC); contains Interpro domain(s) IPR005123 Oxoglutarate and iron-dependent oxygenase
TAATATAATATATAAATATACACACATTATTAATTCTCTTCATAATTCTCTTTCATCTTATCATAATTATAATTCCTCAACTTCCAACATGGTTTCTGAAAAAATTCAAGAAAATATTAAACTTCCAATCATTGACCTTTCATTAGAGAAATCACAAATATTAAAACTCATAGTGAAAGCCTCTGAAGAATTTGGTTTTTTCAAAGTTATTAACCATGGTGTTGACACAAATGTTATAAAAAAAATGGAAGATGAAAGTTATAATTTTTTTTCCAAATCTTTTTCTCAAAAACAATGTGCTGGTCCAGCAAATCCATATGGTTATGGTTGCAAAAATATAGGGTTTAATGGAGATAATGGTGAAGTTGAATATTTGTTACTTCATGCCAATCCTAATATGTCCATCTCTCAAATATCAAAAAATATTTCAAGTGATCCACTAATGTTCAGTTGTGCAGTAAATGGATATGTAAAATCAGTGAGGGAGTTGGCATGTAAGATATTAGAATTGATGGCACAAGGATTAAGGGTCCAACAAACTTCAGTCTACAGTAATCTTCTCATGGACCTTCATTCTGATTCTCTACTACGGATTAATCACTACCCTCCATTCAACTGGACCCCACATCTTCTCCATCATGATTGTGACACGTCACCTAACTCTTGCAACTCCACGGTAAGTAAAATTGGATTTGGAGAGCATACAGACCCTCAGATCTTGACCATCTTAAGATCAAACGATGCTCCTGGCCTACAAATATCAACTCAACAAGGATTGTGGGTCCCCGTATCACCTCACCCGAATACTGCTTTTTCCATCTTCGTTGGAGACACTTTACAGGCTCTGACAAATGGAAGGTTTAAGAGTGTGAGGCATAGGGCCATGGTGAATTCATGCAAACCTAGGATGTCAATGGTGTACTTTGGTGCCCCATCACCCCATGCTAGAATTTGTTGTCCCTTAGAATTGGTCACTACAACACCACACAAACCTTATCATCTATATAGGCCATTCACTTGGGGTGAGTACAAGAAAGCTACTTATTCGATGAGACTTGGGGACACTCGTCTTGATCAATTTTTCAGACTACAATCAGAAAATGATGAAACAATAACTATTAATAATCAAACGTCTTAA
TAATATAATATATAAATATACACACATTATTAATTCTCTTCATAATTCTCTTTCATCTTATCATAATTATAATTCCTCAACTTCCAACATGGTTTCTGAAAAAATTCAAGAAAATATTAAACTTCCAATCATTGACCTTTCATTAGAGAAATCACAAATATTAAAACTCATAGTGAAAGCCTCTGAAGAATTTGGTTTTTTCAAAGTTATTAACCATGGTGTTGACACAAATGTTATAAAAAAAATGGAAGATGAAAGTTATAATTTTTTTTCCAAATCTTTTTCTCAAAAACAATGTGCTGGTCCAGCAAATCCATATGGTTATGGTTGCAAAAATATAGGGTTTAATGGAGATAATGGTGAAGTTGAATATTTGTTACTTCATGCCAATCCTAATATGTCCATCTCTCAAATATCAAAAAATATTTCAAGTGATCCACTAATGTTCAGTTGTGCAGTAAATGGATATGTAAAATCAGTGAGGGAGTTGGCATGTAAGATATTAGAATTGATGGCACAAGGATTAAGGGTCCAACAAACTTCAGTCTACAGTAATCTTCTCATGGACCTTCATTCTGATTCTCTACTACGGATTAATCACTACCCTCCATTCAACTGGACCCCACATCTTCTCCATCATGATTGTGACACGTCACCTAACTCTTGCAACTCCACGGTAAGTAAAATTGGATTTGGAGAGCATACAGACCCTCAGATCTTGACCATCTTAAGATCAAACGATGCTCCTGGCCTACAAATATCAACTCAACAAGGATTGTGGGTCCCCGTATCACCTCACCCGAATACTGCTTTTTCCATCTTCGTTGGAGACACTTTACAGGCTCTGACAAATGGAAGGTTTAAGAGTGTGAGGCATAGGGCCATGGTGAATTCATGCAAACCTAGGATGTCAATGGTGTACTTTGGTGCCCCATCACCCCATGCTAGAATTTGTTGTCCCTTAGAATTGGTCACTACAACACCACACAAACCTTATCATCTATATAGGCCATTCACTTGGGGTGAGTACAAGAAAGCTACTTATTCGATGAGACTTGGGGACACTCGTCTTGATCAATTTTTCAGACTACAATCAGAAAATGATGAAACAATAACTATTAATAATCAAACGTCTTAA
Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc05g053340.2.1 Gibberellin 2-oxidase (AHRD V1 **** A4GVL5_SOLLC); contains Interpro domain(s) IPR005123 Oxoglutarate and iron-dependent oxygenase
MVSEKIQENIKLPIIDLSLEKSQILKLIVKASEEFGFFKVINHGVDTNVIKKMEDESYNFFSKSFSQKQCAGPANPYGYGCKNIGFNGDNGEVEYLLLHANPNMSISQISKNISSDPLMFSCAVNGYVKSVRELACKILELMAQGLRVQQTSVYSNLLMDLHSDSLLRINHYPPFNWTPHLLHHDCDTSPNSCNSTVSKIGFGEHTDPQILTILRSNDAPGLQISTQQGLWVPVSPHPNTAFSIFVGDTLQALTNGRFKSVRHRAMVNSCKPRMSMVYFGAPSPHARICCPLELVTTTPHKPYHLYRPFTWGEYKKATYSMRLGDTRLDQFFRLQSENDETITINNQTS*
MVSEKIQENIKLPIIDLSLEKSQILKLIVKASEEFGFFKVINHGVDTNVIKKMEDESYNFFSKSFSQKQCAGPANPYGYGCKNIGFNGDNGEVEYLLLHANPNMSISQISKNISSDPLMFSCAVNGYVKSVRELACKILELMAQGLRVQQTSVYSNLLMDLHSDSLLRINHYPPFNWTPHLLHHDCDTSPNSCNSTVSKIGFGEHTDPQILTILRSNDAPGLQISTQQGLWVPVSPHPNTAFSIFVGDTLQALTNGRFKSVRHRAMVNSCKPRMSMVYFGAPSPHARICCPLELVTTTPHKPYHLYRPFTWGEYKKATYSMRLGDTRLDQFFRLQSENDETITINNQTS*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
[loading...]
GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
EF441351 gibberellin 2-oxidase [Solanum lycopersicum]
| Other genome matches | None |
Literature annotations [1]
Literature annotations [1]
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Gibberellin regulation of fruit set and growth in tomato.
Plant physiology (2007)
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The role of gibberellins (GAs) in tomato (Solanum lycopersicum) fruit development was investigated. Two different inhibitors of GA biosynthesis (LAB 198999 and paclobutrazol) decreased fruit growth and fruit set, an effect reversed by GA(3) application. LAB 198999 reduced GA(1) and GA(8) content, but increased that of their precursors GA(53), GA(44), GA(19), and GA(20) in pollinated fruits. This supports the hypothesis that GA(1) is the active GA for tomato fruit growth. Unpollinated ovaries developed parthenocarpically in response to GA(3) > GA(1) = GA(4) > GA(20), but not to GA(19), suggesting that GA 20-oxidase activity was limiting in unpollinated ovaries. This was confirmed by analyzing the effect of pollination on transcript levels of SlCPS, SlGA20ox1, -2, and -3, and SlGA3ox1 and -2, encoding enzymes of GA biosynthesis. Pollination increased transcript content of SlGA20ox1, -2, and -3, and SlCPS, but not of SlGA3ox1 and -2. To investigate whether pollination also altered GA inactivation, full-length cDNA clones of genes encoding enzymes catalyzing GA 2-oxidases (SlGA2ox1, -2, -3, -4, and -5) were isolated and characterized. Transcript levels of these genes did not decrease early after pollination (5-d-old fruits), but transcript content reduction of all of them, mainly of SlGA2ox2, was found later (from 10 d after anthesis). We conclude that pollination mediates fruit set by activating GA biosynthesis mainly through up-regulation of GA20ox. Finally, the phylogenetic reconstruction of the GA2ox family clearly showed the existence of three gene subfamilies, and the phylogenetic position of SlGA2ox1, -2, -3, -4, and -5 was established.
Serrani, JC. Sanjuán, R. Ruiz-Rivero, O. Fos, M. García-Martínez, JL.
Plant physiology.
2007.
145(1).
246-57.
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