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Tomato locus FRUITFULL-like MADS-box 1
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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FRUITFULL-like MADS-box 1 is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch06, position: 43177170
Please cite Razifard et al.
Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
Accession name:
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Alleles (0) | None | [Add new Allele] |
![]() ![]() | [Associate new locus] |
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![]() ![]() | View FRUITFULL-like MADS-box 1 relationships in the stand-alone network browser |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc06g069430.2 SL2.50ch06:43182943..43174749 (sequence from reverse strand)
CACATAACAAATAATCCATCTTCTCTGTCCAATGAAAAATCGACAACACATTTGACGAAACCACTCTGGTTTTTTAAAAACCACTATATTCTCTCTCTTCCACATCTGGGATATTTTGCCCAACAAAAGTTATTTCAGATACCAAACAGAGAAACACTACTCCACACCCTTCTTTTTTTTTCTTCCGTCTGTCTCCATTTGATATGATATATATATTACAACAACAATTATTCATAGTATAGAAAAAATATCCGAAAAAATGGGAAGAGGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGATCTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGGTACGTACTCTTTCGTCTTTAATTCTATTGAGCCGCCCTGATTCTCTTTTTCCGCTCATATATCTCTTTTTAAATTTAATTAAATATGCTCTTATACTCTTGATCTTCAATTAGAGATTGGAATTTTTTTTTTCTATTCATTTTGACTTTTTGATATCTTTTTGTTGGTGATATTTTATGTGTTAAATATATATACTGTTTTTTTTTGTTCTTATGTGGGTATTTATATGTAAAAAAATAATATTATTAGTTTACTAAACTGCATGCAGAAACCAATTAAATAAATAATATTTTACAACATAATTATAATCTCGATAGATCCTGTTGTTTTTGTTTCTTTATATAGTCTAAATAATCTCTTAATAAACAGATCCATGATTATTTCGTGTTTAGTAGGTAGAGAATCACGTGGTTGTTAAAGTATATAAAAAAATTATATATGCTCTTTTTTCTTTTTAGTTTTAATTTTAATTTAATTTATTTTTATTCTTTTTTTAATATATATAATATGTAAATATGTAGGATCTAGCTTATGACGTGATCATTCTGTTAAAAGGATGTTATATTTTTTTGAAAAAAAAGTTATTAAAAACTATATGTACAGTTTTTCTTTTAATAATTCTATGTATAAGCACAATAGTAAAAGTATATTTCAGATGATGTGTGTGTTCCATGCAAGTGCAAACTGACTACCAACTCTTCAAAATTTTTGCAGAAACGAGGTCTACAGTAGAACAGCTTTAAAGAGCACAAAAATAACTATTCAACTAGCATTTAAAGCGGATATAATCCTCATAAAAAAAAAGTAAAATAATTATATGTATATATACACTATTTACCAAGTACACTTTTTTTAATTAACAGAATTATATTTATTGAATTGAAAAAAACAAACAAACTAAAATTGATATTTTAATTTCAAAATAACCACATAATTGAGGAAAATAAAAGAAAATTCAATCTCTCGGTCATAAAATGAGTTTTGGATTGAACTTGAATAAGAAAAGGAATATGTATAAAAAATTTTAAAGTCATCTGATATTTTTGAATTCAAAAAGTTAACTTTAGATTTTTTTAAAAAAATTTGGTTAACGAAAAGGGTAAATATGCACCATAAATATTTATCAAAACCAAGGTATATATCATTTGTTAAACGTCTAGTGTATATATGTACCATTTTTTAATAATGGATATATTTTCTTTAAATCACAAAGTTGAAAGGTATATATTTGCCCCTTTTCCCTAAATTTATTGAAGTATATTGCTCGATTTGTTTACTTTTTTCAGTTTATTAAACTAAATATAAATATCTATTTTTACTTGTTCAGTTTTGAAAACAAGAAATTATATTACATTAAGCTGCATTAAAAGAGACAACGCATGTATTCATTTTGTATATAACTAATACTTTGTTTGATATATTTTTTTCAATCTATATATAATTAATGACAGTCTATATATTAGGTATTAAACAATCTAAATCATTATATTAACAATGTAAGGGGTTTTAAAACATGTATTAGAATGATTAAAGTCATAATTGCCCGTCAAAACCTTTTCCAAATCTTTTTCTTGATATTGGTGGAGAGTATTTAGTAAACCAATTCTTTTTAAAAAATAATTATGCAACGTACGTTATTATTAATATACCAATTCAAATACTGCATAATAAATAATATCATCATAACTAAAATCAACATTACTTATACATCACTGTTAACACTATTCTTATTCACCTTATTAAACAATAACTGAAGTCATTTTCAATGCATTAAATTTATTATATTTATAGCTTATTACTATTTTTTAAAAATATTTATAATATATATGTATATATTTTAAAAATATTTCTTAATATATATTCTGATGGTAGGTGCAATAGCCAGACATGCGGGATTAATTATAATCTATAGTTTTGAGCCAAACGTTAGCTGGATATATTCAACGAATTTATTACTTGTACTTTTTTAAAAGCTATGTACATTAATTTTTAGAATGGTATATTAGAGTAGCCAGAAGTTAAGATTTCGATTTTATTAAGTTACCTTTATTTATTATAAAAATGAATTTTCAAGTGCTTATTCTAACTTATTAGGTAATTTAGAGCGAATTGCTTGATGTACTATCTGAAATGATTTTTCACACGTTAACTTGAAAAGTAAAAAATTTCATTGCTTAGTTGTGTAATTATGTAAATTCAAAATGGGTTGTGAGTTAATTAAGTTGGGTCATACATGGATGGGCTGGGTTGGTATTTTATGTGGAGCAATAAATAAAATTTAGGACAAACTCAAAATAGGTGACCTAATGGTCGCCGCCCGACTAAACATACCAATAGTCACCAGATTCATATGAGCTACTGAGGAGTCAACTTTCACATATTGCAAATAAAAAATTCATATTTGTATATTATAGCAAAATTTGCATAATTGCGCTTCATAGCAAACATAGAAACTGTATCATTCGCTATACATATATAGTTGAAGCAAATTGTATAAAACGAAGTGTATAAAACAAAAAAGAGAAAGACACTTAGACAGAGAACTGTATAAAAACGAAGTGTATAAACCAAATAGTATTATTATAAGTGTATAGAACGATTATATACAATTTGTATTTGTATAAAATGAGAAAGAGAGAAAGACAAAAGAGATTTGACACGGAATATACAATTGAATCAAATTGTATAAAACGATAAAGAGAGAAATTAGATACAATTTGAAAATTGTATAAAACGAGAAAGAGAGAGGCAAAAGAAACTGGACAGAGGAGTATTTTTATTGTATAATTATAAGTGTATAGGACAAAAATATATGTACTTGCATGTGTATATACAATTTTCTCACGCTTTATACAAACAGAAATGCAATTTATATATTTTGCTTCTGTTTGTATAAGTGAGAAAAGCAAGGGTGGCGAGCGAGATTTGGGAGAGTGGCGAGCGAGGGGAACAAAAATATGTATTTATACAATTTCCTCTGCTTTATACAATTAGAAATAATTTTTATACACTTGTGTTTGTATAAAAGTGAGGAAGCGAGCGAGAGATTGTAGGAGAGTGGCAAGCGGGATATTTGGGAGAGAGGCGCCTGACAATTTTTTGCAAACGTTTGCTATGGAGCACAATTAAATCAAACCCTAGTTACTCCATTTTATTTAGGTTATTAGTTTGCTATTGTATATAATTTTCCTAAGCAATTAATTAAAAATTATTTAGATGCAATATAATTATACTACTAATGGAGGGGAAATTTTAATCTTAAAATAACACAAGTGATAAATTTGATCCAGTGGATAGAAAGAAAAGAAGAAGACATTCTGAATATTTTTAATAGGTTAAATGACATTTTAACTTTTTCTTAAGGAAATCTTAATATCAAAGTTGGTTGACTAATTAAAATTTCATATTGTTGATGAAAATTCGATTCCCAGTCCTTACCCTACCTCCGTTGATAAAAAAACCCTTTCTAGCTCCACAAGCAAGGTCTGATTGTTTAATTCGACTCAAAAAATTATTTATCAAAATATAGTTTGAAAGAAAATACAAGAATAAGAAGCTATATATATGAACTATGAAGAAAATATTAAAGAAAGAAAATTACTAACAATACATATATTAAAGATAACCTAAGTAAATTCAAAGAAACAAAATTAAATAATAAGATAATACTAACATTATAGTTGTAATATTGTTAAAACAAAATTGAAGAATAAGATAATGGTAGCATTATTATAGGAATATTGGCAAGGGAACATATATGTATGCTATCTAGGCTAGAACTTTGTCTAGGAAGACAGAAAATGTTTGATTACCTACTACTCGTCTATTCCTATCTTTGATTAACACACCCTTTTATCTAGGATTATATCTTTGGTGAGTTAAAGCAGAGTTGGAGTTAGGATTCAAATCTTGTGGGTTCAAGAATCTAGCTCTTTCAAGTTAGTGGATTCTAAATTAATAATACTTAATAATTTGTACATATTGAATAGATTTCTCAAGGCATATATAGAGTTTGGACCAAAGTTACTAGGTTCGACCGAACTCATGTCTCTAGAGGCTAGCTCTGCTCCTGAGTTAAAGTGTCATATCTTGTCTAATCACCTATTTCTATTTCTTCCTCGGTCTATCTCTACCTCTCCTCAAACAATCATCGCCACCCTATAACAATTTCTTTTCAAAATGTTATATCACAAAAATTTTCAATATCTCTTCTCTCTATGCTTTTGATATATTATATTGATATATGTCTCTATGCTTTTATAAGTTACTATAACTTATATATGAACATGTCTATGCTCATACCCTTACATCATGTGATTTTGACTAATTAAATTGCTTCTACATATATAAGAAAGGGAATACTTTTGACAACTATATTTGTACTCCTCCTTAGCATTGTGTTTTAACTTTAGCTTCTAGTTGTTATTCAGAAGAGGTCAGGCAGGTGAGGTTGGGGTTAATGGTAGGAATAAAAAGAAAAAATGAATAGGGAACAAAAGAAAGAGGGTAGATAAGTAATTAAGGTAGTTTAAGTCTATATTATGACATTAATTTGAGTAAGCATGTTAATTAGAACAAAGACCACATCTTAATAAGCTAAACATGAAATATTCAAACCAAAATTAACTTAAAGAAGTTCAAAAGTTACACATATATACTTTAAGGTAATTGTTTTCGACCTTCGCTTATAGCTCTATCCCTTTTTCATATCAACAAAATGTGTTTGGGCCAATTCTTAGGACTAAGTGTAACTGTTGAAACTCGATAATAATAAGCCCGCTCCTCTACACTTTTCTACTTAATTTCATACTAGACTTGGTTCGAACTTGAAACCTATGTCACGAGTTTCTTAAACTTTATCATTTGAACTAAACAGGAGGAAGAGTAATAAGTTGTATACGTTAATATTGTGTATAGCTTATTGTTCAATTTCTCTTTTACGTAAACATTGCTCTATTAATAAAGTTATCTAAGGACTTGAAAGAGAATAATCTCTATAGTTTTGTGCAATTCCTGTATATATTTCATTTTTTTGTATTTGTTTCATCTGACATATGTATATTCTCTTGTGATACTATATATATATGTATGTAATTAGCATGGAGAGGATACTTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTATGCCAAATTCTTTCGTGTTACTTATATATATATCGTCAGTATATAGAGCTTAAATCTCGTTTTTGAGGAGGAAGTTATAAATTTATTTGGTGCAGGTAAGCTGGACCCTTGAACATGCAAAACTTAAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGTACATACATAGTCACATTAAAGAATTTTTTGTGACATTATATATAAATATGTATATTTTCCCCTTTACTTAGAAAATTTTATGATATGTTTGCAGGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCACCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGGTTCAACCAAATTATATGTTTATACAATATAGTTTTTATTTGATAAATAACTCTCTAAATTGAAGTTTTTGATTTCTTTTGTAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGTGAGAATTTTCTTCAAAAGTGTACTTAATATGATGTGGCTGTCTAACAACTTGAGTCCAATTTAAAAATGGTTTCCCTAGTGGAAGTAGCGCGAAACAAGTTCAGTAATTGACATTCTACGTATACTAATCGCCTCCTCTCCACCCTCCTTCCCTTGCGCCCGGCCCTAACCCTAACCCTCTACCTCCCATCCCGTAGTTTTTGTTTCAATTATCTCTTACTTATCAAACATGAAAAAATAAGTAATAAAACTACTTTTTACCAAAGAAAACATTTTCGAAAAAATATCTTACATGTTATCCTTTGTATCAAACACACCTATAGTTTCCAACAAGTCTTGCAATCAACAATTTGTTTATATCTCAATACTGTTAAGTCTTCGACTTGACCATTACAAAAGCTACTAGCTTTTGAGGTTGTGTTAGACTCAGGTTCATATCATTATATTGCATAATTGTGTATACCACCAAATTGAGTAACTTTTTGATGTTTGCATTTGTACAGGACAGAGCATTGCAGGAGCAAAACAACCAGCTTTCGAAGAAGGTTATTACAATATCCCCAAATAAAATACATCTACTTGTCACAAATACTTATGTGAATATTAAAACAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTTTTGCCACAACAACTGGACTCTCCTCACCTTGGGTATACTCCTCTTTCCCCCTTATTTTATTCTTAACTTTTTTATTTTTTATTTAATGACATTTGATATAAAAACAAGATTATGAAATGAGAAAAACCAAATGACAATCATCTAATCAACAGTTCTTTTAAAGGGATAATTGCCTTGATCAAATGTCTATATACTATAGATTTGTATAAATCATATGTGGTCATCCAGAGCAAAAAAATTTAAACATGGACGATTTTTACCTGATAAACTTTAAAGTTATATGTCTTTTATGATATTAAAAAGAAGAAGAGTATTTTTATTTAATAAACTTTTACTTAAAAAAGTTTTTAGATTGGTTAAATGTTTTAGCCAAATAATTAACTACTTAAAAAAAATAAAGTTGCATATGCATATACTACTACAATAACAACAATCTTTAGCGGCAATAAATATAGATATTAGTAAAGAATGCTAAAGTCTTTATCGACATGTGTTCAATACCATTAGAATAAATATTACTAAAAGCTTTAAAAACATATATAGAAAATACTAATTGTCGCTAAAAAATATATATATAACAACAACTAAAAAATTAATTATTGCTATAATTATTTTTAATGTATCGATAGGAGCAATTCTGGCCTTTCACTAGAAGTCTAGAAGCATATAGAGCCAAATTTATTACCTACCAAAACTTTGCACCACTCTACCTTGGATTATATTTCTTTTTATTAAAAAAAAGAAAGAAGAGATGCATTATTGGTGGGGATAGCTTTCTTGGCAACATCAAAGTATGTGAATTGTGGTCTATCATATAGACATATACAATTAATAAGCACTATCGTAAGATTAGTAAGTACTTTATTTTTAATTAAAAGTCTATAAAGTTGTACTGGACATCAAATAGAAAAGCAAATAAAATTAGATGCAATACATTAATTGTAGTTTTGAACCTCAGGTTCAATATCGAAACATTTTGGCTATTTTTTGGTTACATATTATGTTTCGTAACAAAATTACTGGATTGATTTAATTGAAAATGTAATGTAGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGAAGTGGAAGGAGGTAGTTCTTCACAGCAGCAAGGTGCAGCTAATAATACTGTGATGCCACAATGGATGCTTCGTCATCTTAATAATTAAAAGGTATCATTAATACTTCAATATAATTAACTAGGTATATAATTTTGATGCCACAATATATTAATTAAAAGGTATCATTAATACTTCAATATAATTAACTAGGTATATAATTTTGATGCCACAATATATTGTCTATGTGTACTTGCTTTCAAAGACATGCCACAATATAGATGGATTGTTGTAAAAACATTATAATATATGTTAAAAATAAATTTTGATGTATGATTCCAT
CACATAACAAATAATCCATCTTCTCTGTCCAATGAAAAATCGACAACACATTTGACGAAACCACTCTGGTTTTTTAAAAACCACTATATTCTCTCTCTTCCACATCTGGGATATTTTGCCCAACAAAAGTTATTTCAGATACCAAACAGAGAAACACTACTCCACACCCTTCTTTTTTTTTCTTCCGTCTGTCTCCATTTGATATGATATATATATTACAACAACAATTATTCATAGTATAGAAAAAATATCCGAAAAAATGGGAAGAGGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGATCTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGGTACGTACTCTTTCGTCTTTAATTCTATTGAGCCGCCCTGATTCTCTTTTTCCGCTCATATATCTCTTTTTAAATTTAATTAAATATGCTCTTATACTCTTGATCTTCAATTAGAGATTGGAATTTTTTTTTTCTATTCATTTTGACTTTTTGATATCTTTTTGTTGGTGATATTTTATGTGTTAAATATATATACTGTTTTTTTTTGTTCTTATGTGGGTATTTATATGTAAAAAAATAATATTATTAGTTTACTAAACTGCATGCAGAAACCAATTAAATAAATAATATTTTACAACATAATTATAATCTCGATAGATCCTGTTGTTTTTGTTTCTTTATATAGTCTAAATAATCTCTTAATAAACAGATCCATGATTATTTCGTGTTTAGTAGGTAGAGAATCACGTGGTTGTTAAAGTATATAAAAAAATTATATATGCTCTTTTTTCTTTTTAGTTTTAATTTTAATTTAATTTATTTTTATTCTTTTTTTAATATATATAATATGTAAATATGTAGGATCTAGCTTATGACGTGATCATTCTGTTAAAAGGATGTTATATTTTTTTGAAAAAAAAGTTATTAAAAACTATATGTACAGTTTTTCTTTTAATAATTCTATGTATAAGCACAATAGTAAAAGTATATTTCAGATGATGTGTGTGTTCCATGCAAGTGCAAACTGACTACCAACTCTTCAAAATTTTTGCAGAAACGAGGTCTACAGTAGAACAGCTTTAAAGAGCACAAAAATAACTATTCAACTAGCATTTAAAGCGGATATAATCCTCATAAAAAAAAAGTAAAATAATTATATGTATATATACACTATTTACCAAGTACACTTTTTTTAATTAACAGAATTATATTTATTGAATTGAAAAAAACAAACAAACTAAAATTGATATTTTAATTTCAAAATAACCACATAATTGAGGAAAATAAAAGAAAATTCAATCTCTCGGTCATAAAATGAGTTTTGGATTGAACTTGAATAAGAAAAGGAATATGTATAAAAAATTTTAAAGTCATCTGATATTTTTGAATTCAAAAAGTTAACTTTAGATTTTTTTAAAAAAATTTGGTTAACGAAAAGGGTAAATATGCACCATAAATATTTATCAAAACCAAGGTATATATCATTTGTTAAACGTCTAGTGTATATATGTACCATTTTTTAATAATGGATATATTTTCTTTAAATCACAAAGTTGAAAGGTATATATTTGCCCCTTTTCCCTAAATTTATTGAAGTATATTGCTCGATTTGTTTACTTTTTTCAGTTTATTAAACTAAATATAAATATCTATTTTTACTTGTTCAGTTTTGAAAACAAGAAATTATATTACATTAAGCTGCATTAAAAGAGACAACGCATGTATTCATTTTGTATATAACTAATACTTTGTTTGATATATTTTTTTCAATCTATATATAATTAATGACAGTCTATATATTAGGTATTAAACAATCTAAATCATTATATTAACAATGTAAGGGGTTTTAAAACATGTATTAGAATGATTAAAGTCATAATTGCCCGTCAAAACCTTTTCCAAATCTTTTTCTTGATATTGGTGGAGAGTATTTAGTAAACCAATTCTTTTTAAAAAATAATTATGCAACGTACGTTATTATTAATATACCAATTCAAATACTGCATAATAAATAATATCATCATAACTAAAATCAACATTACTTATACATCACTGTTAACACTATTCTTATTCACCTTATTAAACAATAACTGAAGTCATTTTCAATGCATTAAATTTATTATATTTATAGCTTATTACTATTTTTTAAAAATATTTATAATATATATGTATATATTTTAAAAATATTTCTTAATATATATTCTGATGGTAGGTGCAATAGCCAGACATGCGGGATTAATTATAATCTATAGTTTTGAGCCAAACGTTAGCTGGATATATTCAACGAATTTATTACTTGTACTTTTTTAAAAGCTATGTACATTAATTTTTAGAATGGTATATTAGAGTAGCCAGAAGTTAAGATTTCGATTTTATTAAGTTACCTTTATTTATTATAAAAATGAATTTTCAAGTGCTTATTCTAACTTATTAGGTAATTTAGAGCGAATTGCTTGATGTACTATCTGAAATGATTTTTCACACGTTAACTTGAAAAGTAAAAAATTTCATTGCTTAGTTGTGTAATTATGTAAATTCAAAATGGGTTGTGAGTTAATTAAGTTGGGTCATACATGGATGGGCTGGGTTGGTATTTTATGTGGAGCAATAAATAAAATTTAGGACAAACTCAAAATAGGTGACCTAATGGTCGCCGCCCGACTAAACATACCAATAGTCACCAGATTCATATGAGCTACTGAGGAGTCAACTTTCACATATTGCAAATAAAAAATTCATATTTGTATATTATAGCAAAATTTGCATAATTGCGCTTCATAGCAAACATAGAAACTGTATCATTCGCTATACATATATAGTTGAAGCAAATTGTATAAAACGAAGTGTATAAAACAAAAAAGAGAAAGACACTTAGACAGAGAACTGTATAAAAACGAAGTGTATAAACCAAATAGTATTATTATAAGTGTATAGAACGATTATATACAATTTGTATTTGTATAAAATGAGAAAGAGAGAAAGACAAAAGAGATTTGACACGGAATATACAATTGAATCAAATTGTATAAAACGATAAAGAGAGAAATTAGATACAATTTGAAAATTGTATAAAACGAGAAAGAGAGAGGCAAAAGAAACTGGACAGAGGAGTATTTTTATTGTATAATTATAAGTGTATAGGACAAAAATATATGTACTTGCATGTGTATATACAATTTTCTCACGCTTTATACAAACAGAAATGCAATTTATATATTTTGCTTCTGTTTGTATAAGTGAGAAAAGCAAGGGTGGCGAGCGAGATTTGGGAGAGTGGCGAGCGAGGGGAACAAAAATATGTATTTATACAATTTCCTCTGCTTTATACAATTAGAAATAATTTTTATACACTTGTGTTTGTATAAAAGTGAGGAAGCGAGCGAGAGATTGTAGGAGAGTGGCAAGCGGGATATTTGGGAGAGAGGCGCCTGACAATTTTTTGCAAACGTTTGCTATGGAGCACAATTAAATCAAACCCTAGTTACTCCATTTTATTTAGGTTATTAGTTTGCTATTGTATATAATTTTCCTAAGCAATTAATTAAAAATTATTTAGATGCAATATAATTATACTACTAATGGAGGGGAAATTTTAATCTTAAAATAACACAAGTGATAAATTTGATCCAGTGGATAGAAAGAAAAGAAGAAGACATTCTGAATATTTTTAATAGGTTAAATGACATTTTAACTTTTTCTTAAGGAAATCTTAATATCAAAGTTGGTTGACTAATTAAAATTTCATATTGTTGATGAAAATTCGATTCCCAGTCCTTACCCTACCTCCGTTGATAAAAAAACCCTTTCTAGCTCCACAAGCAAGGTCTGATTGTTTAATTCGACTCAAAAAATTATTTATCAAAATATAGTTTGAAAGAAAATACAAGAATAAGAAGCTATATATATGAACTATGAAGAAAATATTAAAGAAAGAAAATTACTAACAATACATATATTAAAGATAACCTAAGTAAATTCAAAGAAACAAAATTAAATAATAAGATAATACTAACATTATAGTTGTAATATTGTTAAAACAAAATTGAAGAATAAGATAATGGTAGCATTATTATAGGAATATTGGCAAGGGAACATATATGTATGCTATCTAGGCTAGAACTTTGTCTAGGAAGACAGAAAATGTTTGATTACCTACTACTCGTCTATTCCTATCTTTGATTAACACACCCTTTTATCTAGGATTATATCTTTGGTGAGTTAAAGCAGAGTTGGAGTTAGGATTCAAATCTTGTGGGTTCAAGAATCTAGCTCTTTCAAGTTAGTGGATTCTAAATTAATAATACTTAATAATTTGTACATATTGAATAGATTTCTCAAGGCATATATAGAGTTTGGACCAAAGTTACTAGGTTCGACCGAACTCATGTCTCTAGAGGCTAGCTCTGCTCCTGAGTTAAAGTGTCATATCTTGTCTAATCACCTATTTCTATTTCTTCCTCGGTCTATCTCTACCTCTCCTCAAACAATCATCGCCACCCTATAACAATTTCTTTTCAAAATGTTATATCACAAAAATTTTCAATATCTCTTCTCTCTATGCTTTTGATATATTATATTGATATATGTCTCTATGCTTTTATAAGTTACTATAACTTATATATGAACATGTCTATGCTCATACCCTTACATCATGTGATTTTGACTAATTAAATTGCTTCTACATATATAAGAAAGGGAATACTTTTGACAACTATATTTGTACTCCTCCTTAGCATTGTGTTTTAACTTTAGCTTCTAGTTGTTATTCAGAAGAGGTCAGGCAGGTGAGGTTGGGGTTAATGGTAGGAATAAAAAGAAAAAATGAATAGGGAACAAAAGAAAGAGGGTAGATAAGTAATTAAGGTAGTTTAAGTCTATATTATGACATTAATTTGAGTAAGCATGTTAATTAGAACAAAGACCACATCTTAATAAGCTAAACATGAAATATTCAAACCAAAATTAACTTAAAGAAGTTCAAAAGTTACACATATATACTTTAAGGTAATTGTTTTCGACCTTCGCTTATAGCTCTATCCCTTTTTCATATCAACAAAATGTGTTTGGGCCAATTCTTAGGACTAAGTGTAACTGTTGAAACTCGATAATAATAAGCCCGCTCCTCTACACTTTTCTACTTAATTTCATACTAGACTTGGTTCGAACTTGAAACCTATGTCACGAGTTTCTTAAACTTTATCATTTGAACTAAACAGGAGGAAGAGTAATAAGTTGTATACGTTAATATTGTGTATAGCTTATTGTTCAATTTCTCTTTTACGTAAACATTGCTCTATTAATAAAGTTATCTAAGGACTTGAAAGAGAATAATCTCTATAGTTTTGTGCAATTCCTGTATATATTTCATTTTTTTGTATTTGTTTCATCTGACATATGTATATTCTCTTGTGATACTATATATATATGTATGTAATTAGCATGGAGAGGATACTTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTATGCCAAATTCTTTCGTGTTACTTATATATATATCGTCAGTATATAGAGCTTAAATCTCGTTTTTGAGGAGGAAGTTATAAATTTATTTGGTGCAGGTAAGCTGGACCCTTGAACATGCAAAACTTAAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGTACATACATAGTCACATTAAAGAATTTTTTGTGACATTATATATAAATATGTATATTTTCCCCTTTACTTAGAAAATTTTATGATATGTTTGCAGGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCACCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGGTTCAACCAAATTATATGTTTATACAATATAGTTTTTATTTGATAAATAACTCTCTAAATTGAAGTTTTTGATTTCTTTTGTAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGTGAGAATTTTCTTCAAAAGTGTACTTAATATGATGTGGCTGTCTAACAACTTGAGTCCAATTTAAAAATGGTTTCCCTAGTGGAAGTAGCGCGAAACAAGTTCAGTAATTGACATTCTACGTATACTAATCGCCTCCTCTCCACCCTCCTTCCCTTGCGCCCGGCCCTAACCCTAACCCTCTACCTCCCATCCCGTAGTTTTTGTTTCAATTATCTCTTACTTATCAAACATGAAAAAATAAGTAATAAAACTACTTTTTACCAAAGAAAACATTTTCGAAAAAATATCTTACATGTTATCCTTTGTATCAAACACACCTATAGTTTCCAACAAGTCTTGCAATCAACAATTTGTTTATATCTCAATACTGTTAAGTCTTCGACTTGACCATTACAAAAGCTACTAGCTTTTGAGGTTGTGTTAGACTCAGGTTCATATCATTATATTGCATAATTGTGTATACCACCAAATTGAGTAACTTTTTGATGTTTGCATTTGTACAGGACAGAGCATTGCAGGAGCAAAACAACCAGCTTTCGAAGAAGGTTATTACAATATCCCCAAATAAAATACATCTACTTGTCACAAATACTTATGTGAATATTAAAACAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTTTTGCCACAACAACTGGACTCTCCTCACCTTGGGTATACTCCTCTTTCCCCCTTATTTTATTCTTAACTTTTTTATTTTTTATTTAATGACATTTGATATAAAAACAAGATTATGAAATGAGAAAAACCAAATGACAATCATCTAATCAACAGTTCTTTTAAAGGGATAATTGCCTTGATCAAATGTCTATATACTATAGATTTGTATAAATCATATGTGGTCATCCAGAGCAAAAAAATTTAAACATGGACGATTTTTACCTGATAAACTTTAAAGTTATATGTCTTTTATGATATTAAAAAGAAGAAGAGTATTTTTATTTAATAAACTTTTACTTAAAAAAGTTTTTAGATTGGTTAAATGTTTTAGCCAAATAATTAACTACTTAAAAAAAATAAAGTTGCATATGCATATACTACTACAATAACAACAATCTTTAGCGGCAATAAATATAGATATTAGTAAAGAATGCTAAAGTCTTTATCGACATGTGTTCAATACCATTAGAATAAATATTACTAAAAGCTTTAAAAACATATATAGAAAATACTAATTGTCGCTAAAAAATATATATATAACAACAACTAAAAAATTAATTATTGCTATAATTATTTTTAATGTATCGATAGGAGCAATTCTGGCCTTTCACTAGAAGTCTAGAAGCATATAGAGCCAAATTTATTACCTACCAAAACTTTGCACCACTCTACCTTGGATTATATTTCTTTTTATTAAAAAAAAGAAAGAAGAGATGCATTATTGGTGGGGATAGCTTTCTTGGCAACATCAAAGTATGTGAATTGTGGTCTATCATATAGACATATACAATTAATAAGCACTATCGTAAGATTAGTAAGTACTTTATTTTTAATTAAAAGTCTATAAAGTTGTACTGGACATCAAATAGAAAAGCAAATAAAATTAGATGCAATACATTAATTGTAGTTTTGAACCTCAGGTTCAATATCGAAACATTTTGGCTATTTTTTGGTTACATATTATGTTTCGTAACAAAATTACTGGATTGATTTAATTGAAAATGTAATGTAGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGAAGTGGAAGGAGGTAGTTCTTCACAGCAGCAAGGTGCAGCTAATAATACTGTGATGCCACAATGGATGCTTCGTCATCTTAATAATTAAAAGGTATCATTAATACTTCAATATAATTAACTAGGTATATAATTTTGATGCCACAATATATTAATTAAAAGGTATCATTAATACTTCAATATAATTAACTAGGTATATAATTTTGATGCCACAATATATTGTCTATGTGTACTTGCTTTCAAAGACATGCCACAATATAGATGGATTGTTGTAAAAACATTATAATATATGTTAAAAATAAATTTTGATGTATGATTCCAT
Download sequence region |
Get flanking sequences on SL2.50ch06
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc06g069430.2.1 MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box
CACATAACAAATAATCCATCTTCTCTGTCCAATGAAAAATCGACAACACATTTGACGAAACCACTCTGGTTTTTTAAAAACCACTATATTCTCTCTCTTCCACATCTGGGATATTTTGCCCAACAAAAGTTATTTCAGATACCAAACAGAGAAACACTACTCCACACCCTTCTTTTTTTTTCTTCCGTCTGTCTCCATTTGATATGATATATATATTACAACAACAATTATTCATAGTATAGAAAAAATATCCGAAAAAATGGGAAGAGGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGATCTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATACTTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTTAAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCACCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGCAGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTTTTGCCACAACAACTGGACTCTCCTCACCTTGGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGAAGTGGAAGGAGGTAGTTCTTCACAGCAGCAAGGTGCAGCTAATAATACTGTGATGCCACAATGGATGCTTCGTCATCTTAATAATTAAAAGGTATCATTAATACTTCAATATAATAATTAACTAGGTATATAATTTTGATGCCACAATATATTGTCTATGTGTACTTGCTTTCAAAGACATGCCACAATATAGATGGATTGTTGTAAAAACATTATAATATATGTTAAAAATAAATTTTGATGTATGATTCCAT
CACATAACAAATAATCCATCTTCTCTGTCCAATGAAAAATCGACAACACATTTGACGAAACCACTCTGGTTTTTTAAAAACCACTATATTCTCTCTCTTCCACATCTGGGATATTTTGCCCAACAAAAGTTATTTCAGATACCAAACAGAGAAACACTACTCCACACCCTTCTTTTTTTTTCTTCCGTCTGTCTCCATTTGATATGATATATATATTACAACAACAATTATTCATAGTATAGAAAAAATATCCGAAAAAATGGGAAGAGGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGATCTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATACTTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTTAAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCACCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGCAGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTTTTGCCACAACAACTGGACTCTCCTCACCTTGGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGAAGTGGAAGGAGGTAGTTCTTCACAGCAGCAAGGTGCAGCTAATAATACTGTGATGCCACAATGGATGCTTCGTCATCTTAATAATTAAAAGGTATCATTAATACTTCAATATAATAATTAACTAGGTATATAATTTTGATGCCACAATATATTGTCTATGTGTACTTGCTTTCAAAGACATGCCACAATATAGATGGATTGTTGTAAAAACATTATAATATATGTTAAAAATAAATTTTGATGTATGATTCCAT
![]() ![]() | translated polypeptide sequence |
>Solyc06g069430.2.1 MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box
MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHAKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKEVAQQNQWEINSSSFVLPQQLDSPHLGEAYQSTNVIDNGEVEGGSSSQQQGAANNTVMPQWMLRHLNN*
MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHAKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKEVAQQNQWEINSSSFVLPQQLDSPHLGEAYQSTNVIDNGEVEGGSSSQQQGAANNTVMPQWMLRHLNN*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
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![]() ![]() | [Associate new genbank sequence] |
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
The MADS box gene family in tomato: temporal expression during floral development, conserved secondary structures and homology with homeotic genes from Antirrhinum and Arabidopsis.
The Plant journal : for cell and molecular biology (1991)
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Five genes with homology to the floral homeotic genes deficiens of Antirrhinum and agamous of Arabidopsis were isolated from tomato. Each of the five genes is unique in the genome and could be localized to a different chromosome by RFLP mapping. Four of the tomato genes (hereafter TM) are flower-specific with distinguishable temporal expression. TM4 and TM8 are 'early', while TM5 and TM6 are 'late' genes. TM4 is homologous to squamous and TM6 is similar to deficiens, which are, respectively, 'early' and 'late' bona fide homeotic genes in Antirrhinum. The proteins encoded by the five tomato genes, like several known homeotic genes from other plants, contain within their N-terminus a highly conserved DNA-binding domain, the MADS box. All known plant MADS box genes also share, however, other properties. They all contain a central, moderately conserved, and rather basic domain, and a highly divergent or even missing C-terminal domain. Furthermore, molecular modelling predicts the presence of a conserved amphipatic alpha helix, at a constant distance from the MADS box in each of these proteins. The common properties of eight MADS box proteins from three plant families indicate that all their domains were coded for by the same ancestor gene. The sequence homology between pairs of MADS genes from different species indicates that the MADS ancestor gene multiplied and diverged in an ancestor plant common to several dicotyledon families.
Pnueli, L. Abu, Abeid. Zamir, D. Nacken, W. Schwarz, Sommer. Lifschitz, E.
The Plant journal : for cell and molecular biology.
1991.
1(2).
255-66.
MADS-box genes expressed during tomato seed and fruit development.
Plant molecular biology (2003)
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MADS-box genes in plants are putative transcription factors involved in regulating numerous developmental processes, such as meristem and organ identity in inflorescences and in flowers. Recent reports indicate that they are involved in other processes than flower development such as the establishment of developing embryos, seed coat and ultimately in root and fruit development. We have identified seven tomato MADS-box genes that are highly expressed during the first steps of tomato fruit development. According to comparisons of their deduced amino acid sequences, they were classified into two groups: (1) already identified tomato MADS-box genes previously defined as flower identity genes (TAG1, TDR4 and TDR6) and (2) new tomato MADS-box genes (TAGL1, TAGL2, TAGL11 and TAGL12). With the exception of TAGL12, which is expressed near uniformly in every tissue, the other genes show an induction during the tomato fruit development phase I (anthesis) and phase II, when active cell division occurs. In situ hybridization analyses show a specific expression pattern for each gene within the fruit and embryo sac tissues suggesting an important role in the establishment of tissue identity. Yeast two-hybrid analyses indicate that some of these proteins could potentially form dimers suggesting they could act together to accomplish their proposed role.
Busi, MV. Bustamante, C. D'Angelo, C. Hidalgo, Cuevas. Boggio, SB. Valle, EM. Zabaleta, E.
Plant molecular biology.
2003.
52(4).
801-15.
Duplication and diversification in the APETALA1/FRUITFULL floral homeotic gene lineage: implications for the evolution of floral development.
Genetics (2003)
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Phylogenetic analyses of angiosperm MADS-box genes suggest that this gene family has undergone multiple duplication events followed by sequence divergence. To determine when such events have taken place and to understand the relationships of particular MADS-box gene lineages, we have identified APETALA1/FRUITFULL-like MADS-box genes from a variety of angiosperm species. Our phylogenetic analyses show two gene clades within the core eudicots, euAP1 (including Arabidopsis APETALA1 and Antirrhinum SQUAMOSA) and euFUL (including Arabidopsis FRUITFULL). Non-core eudicot species have only sequences similar to euFUL genes (FUL-like). The predicted protein products of euFUL and FUL-like genes share a conserved C-terminal motif. In contrast, predicted products of members of the euAP1 gene clade contain a different C terminus that includes an acidic transcription activation domain and a farnesylation signal. Sequence analyses indicate that the euAP1 amino acid motifs may have arisen via a translational frameshift from the euFUL/FUL-like motif. The euAP1 gene clade includes key regulators of floral development that have been implicated in the specification of perianth identity. However, the presence of euAP1 genes only in core eudicots suggests that there may have been changes in mechanisms of floral development that are correlated with the fixation of floral structure seen in this clade.
Litt, A. Irish, VF.
Genetics.
2003.
165(2).
821-33.
Tomato FRUITFULL homologs regulate fruit ripening via ethylene biosynthesis.
Bioscience, biotechnology, and biochemistry (2014)
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Certain MADS-box transcription factors play central roles in regulating fruit ripening. RIPENING INHIBITOR (RIN), a tomato MADS-domain protein, acts as a global regulator of ripening, affecting the climacteric rise of ethylene, pigmentation changes, and fruit softening. Previously, we showed that two MADS-domain proteins, the FRUITFULL homologs FUL1 and FUL2, form complexes with RIN. Here, we characterized the FUL1/FUL2 loss-of-function phenotype in co-suppressed plants. The transgenic plants produced ripening-defective fruits accumulating little or no lycopene. Unlike a previous study on FUL1/FUL2 suppressed tomatoes, our transgenic fruits showed very low levels of ethylene production, and this was associated with suppression of the genes for 1-aminocyclopropane-1-carboxylic acid synthase, a rate-limiting enzyme in ethylene synthesis. FUL1/FUL2 suppression also caused the fruit to soften in a manner independent of ripening, possibly due to reduced cuticle thickness in the peel of the suppressed tomatoes.
Shima, Y. Fujisawa, M. Kitagawa, M. Nakano, T. Kimbara, J. Nakamura, N. Shiina, T. Sugiyama, J. Nakamura, T. Kasumi, T. Ito, Y.
Bioscience, biotechnology, and biochemistry.
2014.
78(2).
231-7.
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