This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.
Tomato locus calcium-dependent protein kinase2
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
[loading edit links...]
|
[loading...]
|
|
![]() ![]() |
calcium-dependent protein kinase2 is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch03, position: 5078653
Please cite Razifard et al.
Registry name: | None | [Associate registry name] |
![]() ![]() | [Add notes, figures or images] |
Success
The display image was set successfully.
Image | Description | Type |
---|
![]() ![]() | [Associate accession] |
Accession name:
Would you Like to specify an allele?
Alleles (0) | None | [Add new Allele] |
![]() ![]() | [Associate new locus] |
[loading...]
|
Associated loci - graphical view | None |
![]() ![]() |
[loading...]
![]() ![]() |
![]() ![]() |
![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc03g033540.2 SL2.50ch03:5083464..5075974 (sequence from reverse strand)
TCTTCCAAAAAAAGTCTCTTTGACCACCACCATCATCAACACCCTCCCCCCACCCCTACGCCCACCCCTCTCTTTCTTCTCTTCTTCCTCCTTTCTACTTCAAACTTTCTTCTTAAATCTCCATTATTGTTTTCACATTCTCACCCAAATAGGGGGGCTTCTCTTTTTCTTTTGATTATATGTACAAATACAACAATACCCAATTCTTGATTTTTGTTCATTTGTCTAATGATCTAAAAAAGATTGCATTTTTACATCATTTGACAAAATGGGTAGTTGTTTTTCAAGCTCCAAAGTTAGTGGCTCAAACAGCAATACCCCTTCAACCAACAATACCACAACAAACACAAACACAGCGGTAAATGCTCATCAAAACCGCAGGGAAACCTCAAAAGCACCTTCAACAACGGTTGTTAATCCAAGAAATCAAGAAGGGTGTAGAGATAAAGGTAATATTAACCAGAAAAATCAACAAAAACAACCTAGGAATTCACAGCAGAATGTTAAACCAAGTTCAAGAAGACAAGGTGGGGTTATTCCTTGTGGGAAAAGAACAGATTTTGGGTATCATAAAGATTTTGAAAAGAGGTATACAATTGGGAAATTGTTGGGTCATGGTCAATTTGGTTATACATATGTTGCTACAGATAAATCTTCTGGAGATCGTGTGGCTGTCAAAAGAATTGAGAAAAACAAGGTATTACCATATCAAGAAAAGATTATCTTTTCTTCTTTTGTGTAGCTGATTTTTGTTTATCCTGGTTAATCTTAGCTTAGTTGGTTAGCTGCCTCGACTTTCATCCTTGTTGACGAGTGTTTGATTCCGCACCTTGTAATCCCCTTGCCTAAAGTATAAAAACTTCATTTTTCCTATTGATTTTCACATGTAGGAGTTGTGGACAGTTTTTGCTATTAAGTTCTAGAGGATTGTTTTGAATCTATTATGTGTTTCTGAGATGTTAGCAGTCATCACTGATTCTGAAATCCTCTGTAGGCACATCTTGTTCTTGTTGACTCAGTCTTAGGTTGTTAGAAAAGTATATCCATCAGCCAATCTAGTGTTTGTTTTGTTGGTAGATGCCGATGTTTTTTTAGTGCTGTCTCATTCTACTGTACTAGCTTTTTCTTCCTGAAAAGGAGTATCTTGGTAGAATCTTGATTTTTCCTGCTTAAGTAGTTATTGTAGATGGTTAATTGGCTATAGACTGAATCTGGCCATGTAAACAGACATCATATTTGAAAAACGTAGCTGCACTTGGTGTTTAATTGTCTTTTGGGGATTGTGGACTTGTAGCAATCTGAAGTCAACGAACTTCAGAAAATCATGAACTAAAGCCAATGGTGAACTATTGGCTTTCATGAGCAACTCTGCTGTTATTTTCTTGCTTAATTTGCTGGAAAATGGCTAACTGACGTGGTTCACATAAAAGCTGTTTTCTAGTCTATAGAATAGAGTACTTGCAGAATCTTTTATTTCTTATGGGTGAATGACTTCTCAAATGTTCAATTATCCATTGATCCATGGTGCAACAAGTCTGCACTGTTGGCCTGTAATTTTTTTTTGCTGGGTAAAATGTTATGCTTGCTTTGTCTCCTATTATCTCCTCTCATCAGATCTGGAGTTCTCGCCAACACTATAGGATGATGGGCCTATGAATTTTGAATACGAATTTCGATGTGTTTTTTTTGTTCTGTTGTCCAATACTGTTAACTTTTACATTAATTGTATGATTATCTAGTCTTCTGTTTACCAGTCAATCACAGTTTCAATGAATCGTACCAATTCATTTTTTGCTGCAGATGGTTCTTCCCATTGCGGTTGAGGATGTGAAACGAGAAGTCAAGATATTGAAGGCCTTAGGTGGTCATGAGAATGTGGTTCAATTCTATAATTCATTCGAGGATGATAATTATGTCTACATTGTGATGGAGTAAGTTTTTTTTTAAAATCTCTCTGGTCCTAGTTTATTTCCCTACTACTAATCCTTCCACTTGAATGGCAAGTTAAGAGTATTCAGTTTTTGTTTTCTTTTAGGTTATGTGAAGGTGGAGAACTATTGGACCGAATTTTGTCCAAGTAAGTATTCTGAAATTACCAGTTTCAGTTGATTATTTGTGAGTTGCAGAATCCCGGCTCTTTATTCAAATTGCTGATTATGAAGTTTTACTGATAAGGGTTGACATAATTTGTCTAATCAGAAAAGACAGTCGGTATACCGAGAAAGATGCAGCAATAGTTGTACGCCAGATGCTAAAAGTGGCAGCTGAGTGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCTGAGGTGTGCAAGCAGTTCGATACTACTTTGACTTGGTAATGCTTCTTGATATTGCTTTTCTGAAACAAACTTTTTTCCTTGTAGAATTTTCTCTTTAAGTCTACAAAGGAGGATTCACCATTAAAAGCGACGGATTTTGGTCTTTCAGACTTCATCAGACCAGGTGATTGGATTCTCTGCCACAGATTTTGGTCTTGCTGAAGTACTAATATTCTTAATACATCTGTCAAGTTCTTTAATGATCTTGGAGGCTATTATTGTGGTTTTCTCTCGTAAAGTTATGAGCTTATCATAGGAAACTTATATATGCAGGGAAAAAGTTCCAAGACATTGTCGGCAGTGCATATTATGTAGCTCCAGAGGTATTAAAGCGTAGATCAGGACCTGAATCAGATGTATGGAGTATTGGCGTAATTACATACATTTTGCTATGTGGTCGTCGGCCTTTCTGGGACAAAACTGAGGATGGTATATTCAAAGAGGTGAGTTGCTAATATATCAAGTGTAATTTAGAAAGATTTCAATTATTGTTTCAACTTGGGAAACCTAAAGAAAGGATATCACAATTTTAGGGCTCTAATGGGGTCATGAACTTGCAGATTTTGTATAAAAGTTTATATGTTTGCCTTTGTTTGTCTTTTCAATAGTGTGTATCAGGTTTGTTTATACCTTTAAGTGGTTTTTTGAAGTTAACACTCACTTAATAAATCTCATCTCTCTTGGAATTTCAGATTTTCCATTCACTTTTTGTTGCATGCTCTCGTAAACATCTTAACTATGATACTGTGATATTTTTTTCTTTGTGGACATTTTAGTTTGTTTCATTTCATTATTGAGTGATTTTGATCTTATGTTTTCATCGTTTTCTCTTTTGTGTCCAAAGAAGTTACTGCTATTTATTTTGTTCATAATTCACTTTTGGTTGATGCTTCCTTGGAGAGGCTCTTATCCAAAGAATTGTTCTTCCTACAAGACATTTAAGTACTTTTACTTCAAGAAGAACAACATTTATATTGTGTAAATTCTTTGTGATTTGCCTGGTTTTGAATAGTTTCTCTAACTTTGCTTCCAAAATGTTAAGGTCCTACGGAACAAGCCTGATTTTCGTCGCAAGCCATGGTCTAACATAAGCAACAGTGCTAAAGATTTTGTAAAGAAAATACTGGTGAAGGATCCTCGCGCTAGACTTACTGCTGCTCAGGCCCTATGTAAGTAATATCATCCTGAATTTGTACTGTTAAGTTGTATAAAGTTTCTCATATCAGCTAAGGGCTTTCAAGGGGTACATAAAAATGTTGGACCACTCCACCCATTTCCTTATGGTTTTGGATTGGATGCTCAGATTCTTTCACATGGTATAGGCACCAACTTTAGCGAGCCTCATCCACATTAAAGTTGGTGTAGGAAACCTAGAATTGGGAGTGTTGTCAAAAACAAAAAGCGCATAAAAGTTCTAAGGTTCGTTGGGGCTTTAAGTGCTAAACGCAAAAAAAGCACGGGCTTTAATTAAAAAAAGGTGCAAATGGAGAAAACAGAAAAGTGTATATGTTTAGTCCAAGACCAATGATTATGAGCATGAATGCCAAATATTTGTACAAAAGAATTGAATCTTTTTTACAATATAGTAAAACATCAATGGCTTAGTGTTGCCTCTTTTTTAAGAATAGGCTCATTGGCAAGGGTGCCTTAGAACTTTGATGATGACATTGAAGTGCATTAAATGAGACAAAGCACTCAACACGTTATGAGCCTCACTTCATGGCTTAAGCGCACCTTTGACAACACTGCACAACAGAAGGGCGTTAAACCTTAAAATCCCCACACCTGCAATACAAGAGCATCTGAAAGGGTCTATACTCATCATCTGTCTTAAGGTTTCCAATTGGCTCTTCACGTTCTTTCACAAGCACCAATTTTTCTTAGTGATTGTAAGGTGTTATGTGATGAAACTGATGTATCGACAGTAGCTCAAGGTTCACTTAAAAAGATTTGTACACTTCGCTTTATCCATTTCATTCACCTACTTCATCAGCAATGTTTGGTAATAGATATCAATCATGGTTCTCTGTCCAGATGTACAGCTTCTACATTTTGATAACTTATAGCACAACATCAGATATGCAGCATATGCTTACTTGTTTGTAGTTCTTGGAAATAAGAACATTATGTCGTAGTGTTCAAATAAATTAGTAAACAAATGTTACTGTGGTCATTCCTTTAAATTTATTGATATAATGAGCAATTGTTTTGAAAATCATCTACTTGAACATCTTCAGCACATCCATGGGTCCGAGAAGGAGGGGATGCATCTGAGATTCCACTGGACATTTCTGTTTTATCCAACATGCGGCAATTTGTCAAATACAGTCGTCTAAAACAGTTTGCTTTACGTGTAAGCTCATTGCTTTCTTATTTCTTAAACCTTTTGTGATAAGGTAACTTCAGTATACAAAACATAAATTTCTGGATGCTGTTCCACTACTTGCAGGCGTTAGCTAGCACACTTGATGAGGAGGAGATCGCTGATCTGCGGGATCAATTTTCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGACAGGTATTGCTCATCTTTCGAGTTGGAGCTAGTTTCGTACTTACAACTCTCAATGGCCATTGGCAAACATTGGAGACATCTCTATTTTGTGTTATCTTGATGCAAAAAAATTGTATATATGCCTTGATCAAAAACATTGTGTATGCATATGGTCGTCATATTTTTGGTGACTTACCACGTTCATTTCCAATGCAGGCCCTTGCAAAGGATCTCCCATGGAAAATGAAAGAATCACGAGTTCTTGAGATTCTTCAAGCGGTAAACTTATTTATCTAGTAATGAAGCATCAGAGCAGAACATGACATCTAATAAATAATAAGATAATTATTACCAAGTATAAAACGCTTTTGTTGCCTTAGGCTGTTGCATGTTTGAAACTACTTTAATAATATAAAAAAAGAAGCATATTCAAAAAAAGGAAGATAATAGCAAGGATTAGGAAGCAAGTTCCTTTGAAGAATTGGTTATCAAATGCACCCAACAGTGTTGTGTAGCAGTCAGTGAAGTGGAATGAAAACCATGAAAGACTAGAGTTCATATCCGGTAAGAGGCCAAACATGTTAGGTGATTTCTTCCTCTCTGTCTGAGCATTATTGGGGCGAAGTTACCCGGTACTTGTGATGGTGGTAGATGGAGATATTCAATGAAATAGTTGAGGTGTGTGCAAGAAGATCATAGCAAAGGATAGCTCATAAGTGCAAGTTCCTTAGAAGAAATTGGTTATCAAATGCACCCAAGAGTGTTACCTAGATGTTAACGAAGTGGGATGAAAATCATGAAAGACTAGAGTTCAAATCCAGTAAGTGACAGAACACGTTGACTGACTTCTTCCCATCTGCTTGAGCCTTATTGAGGCAAAATTACTTGGTACTTGCGATGGTGGGAGTTAGAGACACTCGATGGAATAGTTAATGTGTGTGCAAGCTTGTACTACACCATTTTTAAATTGGTGACCAAATATTTGGGGATTTCTTTGTGTCAGATTGTATATTCCAAATTTTTCCTGCACCATAATCCTTGTTACAAACTTTACTCAATTGTCAATGCTAATATTGCTGCCAAGTGCCAACTAATATAATAATCTTTATAGTTTTCATCATATGCATGTTCATTACTTTCTACTATATGGTCTCTTCTGCAGTTCCGGGACCTAAAGTATTTTGTTCATTGCTTGGCAGATTGACAGTAACACGGATGGGCTTGTTGATTTCCCGGAGTTTGTGGCTGCCACTCTACATGTCCATCAGTTGGAGGAGCATAATTCTACAAAGTGGCAGCAAAGATCACAAGCTGCTTTTGAGAAATTTGATGTTGATAAAGATGGATTCATTACTCCAGAAGAACTTAAAATGGTTAGTATCATAGTATGTGATATTTTTACAGTCTTCTTCCAGGAGCAACAGTTCATAGCATTTTGGATGTCAGTTATTACCATTAACCATATCGTTGACCAACCCTACAAATCAATTAAGCAATTAACTACCCCTAAATGCCATGCTAGTTGCTCTGTATGAATCCTCTGTGTAATTTAGATGATTCATCATTGAAGGGGAGATTTGGCGTAACTAGTAAAATTGTTGCCATGTGACTTGATGGTCATGGGTCAGACTGTGGAAACAACCTTTTTTGTAGAACCGTAAGGCTGTGTACAATAGGCCATTGTGGTCTGGCCCTTCCCTGCACCCTGCGCATAGTAGGGAGGGAGCTTAGTGCACCGGGCTGCCCTTCCTATCATTGTTAGATTATTTTTATGCTGGTCGTCACTTAGGATTGAGCCATGGTTGATTGATACAATTGATATTATGGTGGTCATCTCTCCACTGCAAACCTCCTCCTTTATCCGGGTGCGGAACTTGGTTTGCTTTGCAAACCTCACTGAGACAGAAGATTGGACAACTCCAAATTAACACCCCCTTTGGCACCCCAAGAAAAAGACAGAAGAGAAGTAGCGAGAGTTGCTAAGAATTATAGCATGCTAACTCAAAAAATTACATGCTTCATCACCCTTAAGAGTGATCCACCGACTTTAGAAGGTTGTGATCGGTCCAAAGGGCGGTTTATAGAAGAATTTCTCGGTTATAATATGTTTGGCATCCACTTACATGATACTATTCTTTTGCAGCACACGGGCTTGAGAGGCTCCATAGATCCACTTCTAGAGGAAGCAGATATTGACAAAGACGGAAAGATAAGCATATCAGAATTTCGCAGACTTTTAAGAACTGCTAGTATGAGTTCACCAACGGTGAGAGATTCACGGGGAATGTAACTCTGTAAAGATGTATAAAACGGAGAGATGGACAGTGGACTTCATCAGAAAAATTTTGTGGGAAGACAGATGTGCGTATACATGTTCTCTTGTGCTTGTGCAAGTGTGCTGCATGTTCTCTACATGGATGGCTTCCGAGATGATGGTATTTAGAGACGTGTAGCTTCCACGTGGCACTTTGTAGCTAGTGGTCGTCGTGCCAAGTGTGTTTGTTGAGTTTCCTTTGCCCCCTTCATAAAAGAATTTGGCATGAAGTTGCTTCTTTCCCTGAACAACCAGTTGCAATGTCTTGTAATCTGGTAGTTTTAGTGTATATTCTGT
TCTTCCAAAAAAAGTCTCTTTGACCACCACCATCATCAACACCCTCCCCCCACCCCTACGCCCACCCCTCTCTTTCTTCTCTTCTTCCTCCTTTCTACTTCAAACTTTCTTCTTAAATCTCCATTATTGTTTTCACATTCTCACCCAAATAGGGGGGCTTCTCTTTTTCTTTTGATTATATGTACAAATACAACAATACCCAATTCTTGATTTTTGTTCATTTGTCTAATGATCTAAAAAAGATTGCATTTTTACATCATTTGACAAAATGGGTAGTTGTTTTTCAAGCTCCAAAGTTAGTGGCTCAAACAGCAATACCCCTTCAACCAACAATACCACAACAAACACAAACACAGCGGTAAATGCTCATCAAAACCGCAGGGAAACCTCAAAAGCACCTTCAACAACGGTTGTTAATCCAAGAAATCAAGAAGGGTGTAGAGATAAAGGTAATATTAACCAGAAAAATCAACAAAAACAACCTAGGAATTCACAGCAGAATGTTAAACCAAGTTCAAGAAGACAAGGTGGGGTTATTCCTTGTGGGAAAAGAACAGATTTTGGGTATCATAAAGATTTTGAAAAGAGGTATACAATTGGGAAATTGTTGGGTCATGGTCAATTTGGTTATACATATGTTGCTACAGATAAATCTTCTGGAGATCGTGTGGCTGTCAAAAGAATTGAGAAAAACAAGGTATTACCATATCAAGAAAAGATTATCTTTTCTTCTTTTGTGTAGCTGATTTTTGTTTATCCTGGTTAATCTTAGCTTAGTTGGTTAGCTGCCTCGACTTTCATCCTTGTTGACGAGTGTTTGATTCCGCACCTTGTAATCCCCTTGCCTAAAGTATAAAAACTTCATTTTTCCTATTGATTTTCACATGTAGGAGTTGTGGACAGTTTTTGCTATTAAGTTCTAGAGGATTGTTTTGAATCTATTATGTGTTTCTGAGATGTTAGCAGTCATCACTGATTCTGAAATCCTCTGTAGGCACATCTTGTTCTTGTTGACTCAGTCTTAGGTTGTTAGAAAAGTATATCCATCAGCCAATCTAGTGTTTGTTTTGTTGGTAGATGCCGATGTTTTTTTAGTGCTGTCTCATTCTACTGTACTAGCTTTTTCTTCCTGAAAAGGAGTATCTTGGTAGAATCTTGATTTTTCCTGCTTAAGTAGTTATTGTAGATGGTTAATTGGCTATAGACTGAATCTGGCCATGTAAACAGACATCATATTTGAAAAACGTAGCTGCACTTGGTGTTTAATTGTCTTTTGGGGATTGTGGACTTGTAGCAATCTGAAGTCAACGAACTTCAGAAAATCATGAACTAAAGCCAATGGTGAACTATTGGCTTTCATGAGCAACTCTGCTGTTATTTTCTTGCTTAATTTGCTGGAAAATGGCTAACTGACGTGGTTCACATAAAAGCTGTTTTCTAGTCTATAGAATAGAGTACTTGCAGAATCTTTTATTTCTTATGGGTGAATGACTTCTCAAATGTTCAATTATCCATTGATCCATGGTGCAACAAGTCTGCACTGTTGGCCTGTAATTTTTTTTTGCTGGGTAAAATGTTATGCTTGCTTTGTCTCCTATTATCTCCTCTCATCAGATCTGGAGTTCTCGCCAACACTATAGGATGATGGGCCTATGAATTTTGAATACGAATTTCGATGTGTTTTTTTTGTTCTGTTGTCCAATACTGTTAACTTTTACATTAATTGTATGATTATCTAGTCTTCTGTTTACCAGTCAATCACAGTTTCAATGAATCGTACCAATTCATTTTTTGCTGCAGATGGTTCTTCCCATTGCGGTTGAGGATGTGAAACGAGAAGTCAAGATATTGAAGGCCTTAGGTGGTCATGAGAATGTGGTTCAATTCTATAATTCATTCGAGGATGATAATTATGTCTACATTGTGATGGAGTAAGTTTTTTTTTAAAATCTCTCTGGTCCTAGTTTATTTCCCTACTACTAATCCTTCCACTTGAATGGCAAGTTAAGAGTATTCAGTTTTTGTTTTCTTTTAGGTTATGTGAAGGTGGAGAACTATTGGACCGAATTTTGTCCAAGTAAGTATTCTGAAATTACCAGTTTCAGTTGATTATTTGTGAGTTGCAGAATCCCGGCTCTTTATTCAAATTGCTGATTATGAAGTTTTACTGATAAGGGTTGACATAATTTGTCTAATCAGAAAAGACAGTCGGTATACCGAGAAAGATGCAGCAATAGTTGTACGCCAGATGCTAAAAGTGGCAGCTGAGTGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCTGAGGTGTGCAAGCAGTTCGATACTACTTTGACTTGGTAATGCTTCTTGATATTGCTTTTCTGAAACAAACTTTTTTCCTTGTAGAATTTTCTCTTTAAGTCTACAAAGGAGGATTCACCATTAAAAGCGACGGATTTTGGTCTTTCAGACTTCATCAGACCAGGTGATTGGATTCTCTGCCACAGATTTTGGTCTTGCTGAAGTACTAATATTCTTAATACATCTGTCAAGTTCTTTAATGATCTTGGAGGCTATTATTGTGGTTTTCTCTCGTAAAGTTATGAGCTTATCATAGGAAACTTATATATGCAGGGAAAAAGTTCCAAGACATTGTCGGCAGTGCATATTATGTAGCTCCAGAGGTATTAAAGCGTAGATCAGGACCTGAATCAGATGTATGGAGTATTGGCGTAATTACATACATTTTGCTATGTGGTCGTCGGCCTTTCTGGGACAAAACTGAGGATGGTATATTCAAAGAGGTGAGTTGCTAATATATCAAGTGTAATTTAGAAAGATTTCAATTATTGTTTCAACTTGGGAAACCTAAAGAAAGGATATCACAATTTTAGGGCTCTAATGGGGTCATGAACTTGCAGATTTTGTATAAAAGTTTATATGTTTGCCTTTGTTTGTCTTTTCAATAGTGTGTATCAGGTTTGTTTATACCTTTAAGTGGTTTTTTGAAGTTAACACTCACTTAATAAATCTCATCTCTCTTGGAATTTCAGATTTTCCATTCACTTTTTGTTGCATGCTCTCGTAAACATCTTAACTATGATACTGTGATATTTTTTTCTTTGTGGACATTTTAGTTTGTTTCATTTCATTATTGAGTGATTTTGATCTTATGTTTTCATCGTTTTCTCTTTTGTGTCCAAAGAAGTTACTGCTATTTATTTTGTTCATAATTCACTTTTGGTTGATGCTTCCTTGGAGAGGCTCTTATCCAAAGAATTGTTCTTCCTACAAGACATTTAAGTACTTTTACTTCAAGAAGAACAACATTTATATTGTGTAAATTCTTTGTGATTTGCCTGGTTTTGAATAGTTTCTCTAACTTTGCTTCCAAAATGTTAAGGTCCTACGGAACAAGCCTGATTTTCGTCGCAAGCCATGGTCTAACATAAGCAACAGTGCTAAAGATTTTGTAAAGAAAATACTGGTGAAGGATCCTCGCGCTAGACTTACTGCTGCTCAGGCCCTATGTAAGTAATATCATCCTGAATTTGTACTGTTAAGTTGTATAAAGTTTCTCATATCAGCTAAGGGCTTTCAAGGGGTACATAAAAATGTTGGACCACTCCACCCATTTCCTTATGGTTTTGGATTGGATGCTCAGATTCTTTCACATGGTATAGGCACCAACTTTAGCGAGCCTCATCCACATTAAAGTTGGTGTAGGAAACCTAGAATTGGGAGTGTTGTCAAAAACAAAAAGCGCATAAAAGTTCTAAGGTTCGTTGGGGCTTTAAGTGCTAAACGCAAAAAAAGCACGGGCTTTAATTAAAAAAAGGTGCAAATGGAGAAAACAGAAAAGTGTATATGTTTAGTCCAAGACCAATGATTATGAGCATGAATGCCAAATATTTGTACAAAAGAATTGAATCTTTTTTACAATATAGTAAAACATCAATGGCTTAGTGTTGCCTCTTTTTTAAGAATAGGCTCATTGGCAAGGGTGCCTTAGAACTTTGATGATGACATTGAAGTGCATTAAATGAGACAAAGCACTCAACACGTTATGAGCCTCACTTCATGGCTTAAGCGCACCTTTGACAACACTGCACAACAGAAGGGCGTTAAACCTTAAAATCCCCACACCTGCAATACAAGAGCATCTGAAAGGGTCTATACTCATCATCTGTCTTAAGGTTTCCAATTGGCTCTTCACGTTCTTTCACAAGCACCAATTTTTCTTAGTGATTGTAAGGTGTTATGTGATGAAACTGATGTATCGACAGTAGCTCAAGGTTCACTTAAAAAGATTTGTACACTTCGCTTTATCCATTTCATTCACCTACTTCATCAGCAATGTTTGGTAATAGATATCAATCATGGTTCTCTGTCCAGATGTACAGCTTCTACATTTTGATAACTTATAGCACAACATCAGATATGCAGCATATGCTTACTTGTTTGTAGTTCTTGGAAATAAGAACATTATGTCGTAGTGTTCAAATAAATTAGTAAACAAATGTTACTGTGGTCATTCCTTTAAATTTATTGATATAATGAGCAATTGTTTTGAAAATCATCTACTTGAACATCTTCAGCACATCCATGGGTCCGAGAAGGAGGGGATGCATCTGAGATTCCACTGGACATTTCTGTTTTATCCAACATGCGGCAATTTGTCAAATACAGTCGTCTAAAACAGTTTGCTTTACGTGTAAGCTCATTGCTTTCTTATTTCTTAAACCTTTTGTGATAAGGTAACTTCAGTATACAAAACATAAATTTCTGGATGCTGTTCCACTACTTGCAGGCGTTAGCTAGCACACTTGATGAGGAGGAGATCGCTGATCTGCGGGATCAATTTTCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGACAGGTATTGCTCATCTTTCGAGTTGGAGCTAGTTTCGTACTTACAACTCTCAATGGCCATTGGCAAACATTGGAGACATCTCTATTTTGTGTTATCTTGATGCAAAAAAATTGTATATATGCCTTGATCAAAAACATTGTGTATGCATATGGTCGTCATATTTTTGGTGACTTACCACGTTCATTTCCAATGCAGGCCCTTGCAAAGGATCTCCCATGGAAAATGAAAGAATCACGAGTTCTTGAGATTCTTCAAGCGGTAAACTTATTTATCTAGTAATGAAGCATCAGAGCAGAACATGACATCTAATAAATAATAAGATAATTATTACCAAGTATAAAACGCTTTTGTTGCCTTAGGCTGTTGCATGTTTGAAACTACTTTAATAATATAAAAAAAGAAGCATATTCAAAAAAAGGAAGATAATAGCAAGGATTAGGAAGCAAGTTCCTTTGAAGAATTGGTTATCAAATGCACCCAACAGTGTTGTGTAGCAGTCAGTGAAGTGGAATGAAAACCATGAAAGACTAGAGTTCATATCCGGTAAGAGGCCAAACATGTTAGGTGATTTCTTCCTCTCTGTCTGAGCATTATTGGGGCGAAGTTACCCGGTACTTGTGATGGTGGTAGATGGAGATATTCAATGAAATAGTTGAGGTGTGTGCAAGAAGATCATAGCAAAGGATAGCTCATAAGTGCAAGTTCCTTAGAAGAAATTGGTTATCAAATGCACCCAAGAGTGTTACCTAGATGTTAACGAAGTGGGATGAAAATCATGAAAGACTAGAGTTCAAATCCAGTAAGTGACAGAACACGTTGACTGACTTCTTCCCATCTGCTTGAGCCTTATTGAGGCAAAATTACTTGGTACTTGCGATGGTGGGAGTTAGAGACACTCGATGGAATAGTTAATGTGTGTGCAAGCTTGTACTACACCATTTTTAAATTGGTGACCAAATATTTGGGGATTTCTTTGTGTCAGATTGTATATTCCAAATTTTTCCTGCACCATAATCCTTGTTACAAACTTTACTCAATTGTCAATGCTAATATTGCTGCCAAGTGCCAACTAATATAATAATCTTTATAGTTTTCATCATATGCATGTTCATTACTTTCTACTATATGGTCTCTTCTGCAGTTCCGGGACCTAAAGTATTTTGTTCATTGCTTGGCAGATTGACAGTAACACGGATGGGCTTGTTGATTTCCCGGAGTTTGTGGCTGCCACTCTACATGTCCATCAGTTGGAGGAGCATAATTCTACAAAGTGGCAGCAAAGATCACAAGCTGCTTTTGAGAAATTTGATGTTGATAAAGATGGATTCATTACTCCAGAAGAACTTAAAATGGTTAGTATCATAGTATGTGATATTTTTACAGTCTTCTTCCAGGAGCAACAGTTCATAGCATTTTGGATGTCAGTTATTACCATTAACCATATCGTTGACCAACCCTACAAATCAATTAAGCAATTAACTACCCCTAAATGCCATGCTAGTTGCTCTGTATGAATCCTCTGTGTAATTTAGATGATTCATCATTGAAGGGGAGATTTGGCGTAACTAGTAAAATTGTTGCCATGTGACTTGATGGTCATGGGTCAGACTGTGGAAACAACCTTTTTTGTAGAACCGTAAGGCTGTGTACAATAGGCCATTGTGGTCTGGCCCTTCCCTGCACCCTGCGCATAGTAGGGAGGGAGCTTAGTGCACCGGGCTGCCCTTCCTATCATTGTTAGATTATTTTTATGCTGGTCGTCACTTAGGATTGAGCCATGGTTGATTGATACAATTGATATTATGGTGGTCATCTCTCCACTGCAAACCTCCTCCTTTATCCGGGTGCGGAACTTGGTTTGCTTTGCAAACCTCACTGAGACAGAAGATTGGACAACTCCAAATTAACACCCCCTTTGGCACCCCAAGAAAAAGACAGAAGAGAAGTAGCGAGAGTTGCTAAGAATTATAGCATGCTAACTCAAAAAATTACATGCTTCATCACCCTTAAGAGTGATCCACCGACTTTAGAAGGTTGTGATCGGTCCAAAGGGCGGTTTATAGAAGAATTTCTCGGTTATAATATGTTTGGCATCCACTTACATGATACTATTCTTTTGCAGCACACGGGCTTGAGAGGCTCCATAGATCCACTTCTAGAGGAAGCAGATATTGACAAAGACGGAAAGATAAGCATATCAGAATTTCGCAGACTTTTAAGAACTGCTAGTATGAGTTCACCAACGGTGAGAGATTCACGGGGAATGTAACTCTGTAAAGATGTATAAAACGGAGAGATGGACAGTGGACTTCATCAGAAAAATTTTGTGGGAAGACAGATGTGCGTATACATGTTCTCTTGTGCTTGTGCAAGTGTGCTGCATGTTCTCTACATGGATGGCTTCCGAGATGATGGTATTTAGAGACGTGTAGCTTCCACGTGGCACTTTGTAGCTAGTGGTCGTCGTGCCAAGTGTGTTTGTTGAGTTTCCTTTGCCCCCTTCATAAAAGAATTTGGCATGAAGTTGCTTCTTTCCCTGAACAACCAGTTGCAATGTCTTGTAATCTGGTAGTTTTAGTGTATATTCTGT
Download sequence region |
Get flanking sequences on SL2.50ch03
|
![]() ![]() |
![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc03g033540.2.1 Calcium-dependent protein kinase (AHRD V1 **** C6KGT3_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
TCTTCCAAAAAAAGTCTCTTTGACCACCACCATCATCAACACCCTCCCCCCACCCCTACGCCCACCCCTCTCTTTCTTCTCTTCTTCCTCCTTTCTACTTCAAACTTTCTTCTTAAATCTCCATTATTGTTTTCACATTCTCACCCAAATAGGGGGGCTTCTCTTTTTCTTTTGATTATATGTACAAATACAACAATACCCAATTCTTGATTTTTGTTCATTTGTCTAATGATCTAAAAAAGATTGCATTTTTACATCATTTGACAAAATGGGTAGTTGTTTTTCAAGCTCCAAAGTTAGTGGCTCAAACAGCAATACCCCTTCAACCAACAATACCACAACAAACACAAACACAGCGGTAAATGCTCATCAAAACCGCAGGGAAACCTCAAAAGCACCTTCAACAACGGTTGTTAATCCAAGAAATCAAGAAGGGTGTAGAGATAAAGGTAATATTAACCAGAAAAATCAACAAAAACAACCTAGGAATTCACAGCAGAATGTTAAACCAAGTTCAAGAAGACAAGGTGGGGTTATTCCTTGTGGGAAAAGAACAGATTTTGGGTATCATAAAGATTTTGAAAAGAGGTATACAATTGGGAAATTGTTGGGTCATGGTCAATTTGGTTATACATATGTTGCTACAGATAAATCTTCTGGAGATCGTGTGGCTGTCAAAAGAATTGAGAAAAACAAGATGGTTCTTCCCATTGCGGTTGAGGATGTGAAACGAGAAGTCAAGATATTGAAGGCCTTAGGTGGTCATGAGAATGTGGTTCAATTCTATAATTCATTCGAGGATGATAATTATGTCTACATTGTGATGGAGTTATGTGAAGGTGGAGAACTATTGGACCGAATTTTGTCCAAAAAAGACAGTCGGTATACCGAGAAAGATGCAGCAATAGTTGTACGCCAGATGCTAAAAGTGGCAGCTGAGTGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCTGAGAATTTTCTCTTTAAGTCTACAAAGGAGGATTCACCATTAAAAGCGACGGATTTTGGTCTTTCAGACTTCATCAGACCAGGGAAAAAGTTCCAAGACATTGTCGGCAGTGCATATTATGTAGCTCCAGAGGTATTAAAGCGTAGATCAGGACCTGAATCAGATGTATGGAGTATTGGCGTAATTACATACATTTTGCTATGTGGTCGTCGGCCTTTCTGGGACAAAACTGAGGATGGTATATTCAAAGAGGTCCTACGGAACAAGCCTGATTTTCGTCGCAAGCCATGGTCTAACATAAGCAACAGTGCTAAAGATTTTGTAAAGAAAATACTGGTGAAGGATCCTCGCGCTAGACTTACTGCTGCTCAGGCCCTATCACATCCATGGGTCCGAGAAGGAGGGGATGCATCTGAGATTCCACTGGACATTTCTGTTTTATCCAACATGCGGCAATTTGTCAAATACAGTCGTCTAAAACAGTTTGCTTTACGTGCGTTAGCTAGCACACTTGATGAGGAGGAGATCGCTGATCTGCGGGATCAATTTTCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGACAGGCCCTTGCAAAGGATCTCCCATGGAAAATGAAAGAATCACGAGTTCTTGAGATTCTTCAAGCGATTGACAGTAACACGGATGGGCTTGTTGATTTCCCGGAGTTTGTGGCTGCCACTCTACATGTCCATCAGTTGGAGGAGCATAATTCTACAAAGTGGCAGCAAAGATCACAAGCTGCTTTTGAGAAATTTGATGTTGATAAAGATGGATTCATTACTCCAGAAGAACTTAAAATGCACACGGGCTTGAGAGGCTCCATAGATCCACTTCTAGAGGAAGCAGATATTGACAAAGACGGAAAGATAAGCATATCAGAATTTCGCAGACTTTTAAGAACTGCTAGTATGAGTTCACCAACGGTGAGAGATTCACGGGGAATGTAACTCTGTAAAGATGTATAAAACGGAGAGATGGACAGTGGACTTCATCAGAAAAATTTTGTGGGAAGACAGATGTGCGTATACATGTTCTCTTGTGCTTGTGCAAGTGTGCTGCATGTTCTCTACATGGATGGCTTCCGAGATGATGGTATTTAGAGACGTGTAGCTTCCACGTGGCACTTTGTAGCTAGTGGTCGTCGTGCCAAGTGTGTTTGTTGAGTTTCCTTTGCCCCCTTCATAAAAGAATTTGGCATGAAGTTGCTTCTTTCCCTGAACAACCAGTTGCAATGTCTTGTAATCTGGTAGTTTTAGTGTATATTCTGT
TCTTCCAAAAAAAGTCTCTTTGACCACCACCATCATCAACACCCTCCCCCCACCCCTACGCCCACCCCTCTCTTTCTTCTCTTCTTCCTCCTTTCTACTTCAAACTTTCTTCTTAAATCTCCATTATTGTTTTCACATTCTCACCCAAATAGGGGGGCTTCTCTTTTTCTTTTGATTATATGTACAAATACAACAATACCCAATTCTTGATTTTTGTTCATTTGTCTAATGATCTAAAAAAGATTGCATTTTTACATCATTTGACAAAATGGGTAGTTGTTTTTCAAGCTCCAAAGTTAGTGGCTCAAACAGCAATACCCCTTCAACCAACAATACCACAACAAACACAAACACAGCGGTAAATGCTCATCAAAACCGCAGGGAAACCTCAAAAGCACCTTCAACAACGGTTGTTAATCCAAGAAATCAAGAAGGGTGTAGAGATAAAGGTAATATTAACCAGAAAAATCAACAAAAACAACCTAGGAATTCACAGCAGAATGTTAAACCAAGTTCAAGAAGACAAGGTGGGGTTATTCCTTGTGGGAAAAGAACAGATTTTGGGTATCATAAAGATTTTGAAAAGAGGTATACAATTGGGAAATTGTTGGGTCATGGTCAATTTGGTTATACATATGTTGCTACAGATAAATCTTCTGGAGATCGTGTGGCTGTCAAAAGAATTGAGAAAAACAAGATGGTTCTTCCCATTGCGGTTGAGGATGTGAAACGAGAAGTCAAGATATTGAAGGCCTTAGGTGGTCATGAGAATGTGGTTCAATTCTATAATTCATTCGAGGATGATAATTATGTCTACATTGTGATGGAGTTATGTGAAGGTGGAGAACTATTGGACCGAATTTTGTCCAAAAAAGACAGTCGGTATACCGAGAAAGATGCAGCAATAGTTGTACGCCAGATGCTAAAAGTGGCAGCTGAGTGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCTGAGAATTTTCTCTTTAAGTCTACAAAGGAGGATTCACCATTAAAAGCGACGGATTTTGGTCTTTCAGACTTCATCAGACCAGGGAAAAAGTTCCAAGACATTGTCGGCAGTGCATATTATGTAGCTCCAGAGGTATTAAAGCGTAGATCAGGACCTGAATCAGATGTATGGAGTATTGGCGTAATTACATACATTTTGCTATGTGGTCGTCGGCCTTTCTGGGACAAAACTGAGGATGGTATATTCAAAGAGGTCCTACGGAACAAGCCTGATTTTCGTCGCAAGCCATGGTCTAACATAAGCAACAGTGCTAAAGATTTTGTAAAGAAAATACTGGTGAAGGATCCTCGCGCTAGACTTACTGCTGCTCAGGCCCTATCACATCCATGGGTCCGAGAAGGAGGGGATGCATCTGAGATTCCACTGGACATTTCTGTTTTATCCAACATGCGGCAATTTGTCAAATACAGTCGTCTAAAACAGTTTGCTTTACGTGCGTTAGCTAGCACACTTGATGAGGAGGAGATCGCTGATCTGCGGGATCAATTTTCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGACAGGCCCTTGCAAAGGATCTCCCATGGAAAATGAAAGAATCACGAGTTCTTGAGATTCTTCAAGCGATTGACAGTAACACGGATGGGCTTGTTGATTTCCCGGAGTTTGTGGCTGCCACTCTACATGTCCATCAGTTGGAGGAGCATAATTCTACAAAGTGGCAGCAAAGATCACAAGCTGCTTTTGAGAAATTTGATGTTGATAAAGATGGATTCATTACTCCAGAAGAACTTAAAATGCACACGGGCTTGAGAGGCTCCATAGATCCACTTCTAGAGGAAGCAGATATTGACAAAGACGGAAAGATAAGCATATCAGAATTTCGCAGACTTTTAAGAACTGCTAGTATGAGTTCACCAACGGTGAGAGATTCACGGGGAATGTAACTCTGTAAAGATGTATAAAACGGAGAGATGGACAGTGGACTTCATCAGAAAAATTTTGTGGGAAGACAGATGTGCGTATACATGTTCTCTTGTGCTTGTGCAAGTGTGCTGCATGTTCTCTACATGGATGGCTTCCGAGATGATGGTATTTAGAGACGTGTAGCTTCCACGTGGCACTTTGTAGCTAGTGGTCGTCGTGCCAAGTGTGTTTGTTGAGTTTCCTTTGCCCCCTTCATAAAAGAATTTGGCATGAAGTTGCTTCTTTCCCTGAACAACCAGTTGCAATGTCTTGTAATCTGGTAGTTTTAGTGTATATTCTGT
![]() ![]() | translated polypeptide sequence |
>Solyc03g033540.2.1 Calcium-dependent protein kinase (AHRD V1 **** C6KGT3_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
MGSCFSSSKVSGSNSNTPSTNNTTTNTNTAVNAHQNRRETSKAPSTTVVNPRNQEGCRDKGNINQKNQQKQPRNSQQNVKPSSRRQGGVIPCGKRTDFGYHKDFEKRYTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNKMVLPIAVEDVKREVKILKALGGHENVVQFYNSFEDDNYVYIVMELCEGGELLDRILSKKDSRYTEKDAAIVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWSNISNSAKDFVKKILVKDPRARLTAAQALSHPWVREGGDASEIPLDISVLSNMRQFVKYSRLKQFALRALASTLDEEEIADLRDQFSAIDVDKNGVISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFPEFVAATLHVHQLEEHNSTKWQQRSQAAFEKFDVDKDGFITPEELKMHTGLRGSIDPLLEEADIDKDGKISISEFRRLLRTASMSSPTVRDSRGM*
MGSCFSSSKVSGSNSNTPSTNNTTTNTNTAVNAHQNRRETSKAPSTTVVNPRNQEGCRDKGNINQKNQQKQPRNSQQNVKPSSRRQGGVIPCGKRTDFGYHKDFEKRYTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNKMVLPIAVEDVKREVKILKALGGHENVVQFYNSFEDDNYVYIVMELCEGGELLDRILSKKDSRYTEKDAAIVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWSNISNSAKDFVKKILVKDPRARLTAAQALSHPWVREGGDASEIPLDISVLSNMRQFVKYSRLKQFALRALASTLDEEEIADLRDQFSAIDVDKNGVISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFPEFVAATLHVHQLEEHNSTKWQQRSQAAFEKFDVDKDGFITPEELKMHTGLRGSIDPLLEEADIDKDGKISISEFRRLLRTASMSSPTVRDSRGM*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
[loading...]
![]() ![]() | [Associate new genbank sequence] |
GQ205414 Solanum lycopersicum calcium-dependent protein kinase mRNA, complete cds.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Expression profiling of a novel calcium-dependent protein kinase gene, LeCPK2, from tomato (Solanum lycopersicum) under heat and pathogen-related hormones.
Bioscience, biotechnology, and biochemistry (2009)
Show / hide abstract
Show / hide abstract
A full-length cDNA LeCPK2 (GenBank GQ205414) from tomato (Solanum lycopersicum) encoding a calcium-dependent protein kinase (CDPK) was cloned by in silico cloning using NtCPK5 (AY971376) as a virtual probe. The deduced amino acid sequence of LeCPK2 contained the kinase, autoinhibitory, and calmodulin-like domains typical of CDPKs. Expression profiling indicated that LeCPK2 expressed predominantly in flowers and responded divergently to heat and cold stress, in which obvious mRNA accumulation was detected at 4 h under 42 degrees C stress, but no change in LeCPK2 mRNA levels was observed in 6 h at 4 degrees C. Mechanical wounding and phytohormones including ethylene, methyl jasmonate, and salicylic acid were also observed to arouse the expression of LeCPK2 in a similar pattern. mRNA accumulation was enhanced at 30 min and reached a maximum at 3 h, followed by a decrease to the normal level. All the results suggest that LeCPK2 is a novel versatile isoform of tomato CDPKs.
Chang, WJ. Su, HS. Li, WJ. Zhang, ZL.
Bioscience, biotechnology, and biochemistry.
2009.
73(11).
2427-31.
![]() ![]() | [Add ontology annotations] |
[loading...]
![]() ![]() |
- Genomic details
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Your Lists
Public Lists
List Contents
List Validation Report: Failed
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Click the Adjust Case button to align the case in the list with what is in the database.
Multiple mismatched case
Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
List elements matching a synonym
Multiple synonym matches
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Your Datasets
Public Datasets
Dataset Contents
Dataset Validation Failed
Elements not found:
Your Calendar
Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?
Add New Event
Event Info
Attribute | Value |
---|---|
Project Name: | |
Start Date: | |
End Date: | |
Event Type: | |
Event Description: | |
Event Web URL: |
Edit Event
Login
Forgot Username
If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.
Reset Password
To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.
Create New User
Working
