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Tomato locus polygalacturonase AF118567
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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| Registry name: | None | [Associate registry name] |
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Accessions and images (0)
| [Associate accession] |
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| Alleles (0) | None | [Add new Allele] |
Associated loci (0)
Associated loci (0)
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| Associated loci - graphical view | None |
SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc08g060970.2 SL2.50ch08:46150021..46145278 (sequence from reverse strand)
CTGATTCACCGGCACAGCCATAATTCACACATCCAAACTGTTTCTACAATTTAATTCCTTCGATCGTTCGCCCACAGGCTCCTGTCCGAGTCCAGTTCCTGTAATCAGCTATGGAGGTTCGTATTCTTCAGCTCTTTCAGATTTGATTGTTCAGTTTTTAATTAGCTTAATGGATATTGAAATTTTTTCCGTTCAACAATGGTTGTTTATTAAATATTTTTCTTTGAAAAATACACGATAATACTTGCTAACTTCATGAAATGATTGAATAATTTTAATATTACTTTTTAATTACCCTTACTAGTAATCGTTGTTGTTTCCCTGTTATTCTCTGTCCCAATTCTAAAATTTATATATATTTATTTTTTATTATAAATCTTCTATATATTTTTTAATAACTTTGACTTGTTTATTAATATGACATATAATATTTTTTAAGTAATTTATAAATATATAAATTTAATTTTAAAAAATTAAATATTCAATACGTTTGATCAAATTTAAATTGAAAATGAAAAATATCACATAAATTGAAATAGAAAGAATTAATTTTTTATAAAATTATCTTTTCATTTATAGTTTATTAAAAATGAGTGAAACTTGAGGTACTATAGAAAAATTCAATCCTTAGTCTAGAAAAATTTGAGGTACTATAGAAATGATGTAAGAAAATTCACGTGATGAATATACTGCAAAAATCTTTCTGTTCTGATCGTTAGCTTTTCACTTTCCTCTTCTCTTTCCTATTTTTTTTGCTATTTGTTGTTTTGTTTTTTACTTTTTGGTGCTTTTGGTCAGTTGTGTTGAATTGGATGTACTTGTACATTCATTTCTCATTAAATAGAAGTTTTTATTTACAGAGAATAAAATCATCTCTATTTCTAATTGAAAACATATTAGATATAGTTGCACTTGCCCCTAAGATATTTTTTTTGGTCTAACTCATACACAAATTCTTTTGGATCTTTCTCCTCAGGTTTCTTAATTATGTAATTTTTTTATTAAATCATTAAATCACGCATAATTTATTTTTTAAAAATATTTTTGGCTGATTTTGATCAAACTTTTCTATTGTAAATGTCTTCAATGGTATCCACATTATAATGATTTTGCTTAAATGAATGAAGACAAATTGTGTATTATATTTATTTATTTATTAATGTAGTCAAATGACGTGAAGTAAAATACAATTATTCTTGAATATTTTCACTATCAATTAAACTAATGATTTCTGAATCAACATATTTATCCTCTATCAATATCCCTCACAAAATTTGATTATAGATTAGCCAATTTAAACAATTTTGAGTTGTGGAATTTTCAATATTAAGCTTTGAAGTCAATTTTGGTATGTTCAAAAAAAATTATGGTCAAACACTTCTTAATTTGGAACATTAACTAAGCAATTATTGTAGCCCATCTTCTTTTTCCATCTCATTCAAGGTGAAAATGATCTATTATGTCAGCCATATATCTTGATTTGTGCATCATACTAATCTTTAGTGTATTGTTTCAATTTTATAGAATTTTCTTGAAGGAACATGTCAGTTGTATAAATTAAAAAATAAATAGGAAAGGACTGATTTTTTAAAACTTTTTATGTGTGAATATATGATATAGTATACAGAGAATTTTTGACTAGAAGTTCAAAATTCTCTATCTTCTCGACTCCTTATTATACACTAGTTATGGGTTTTTATTTCTAAACATAATAAGTTTTTTCTTTCATAATTTTTTAAAAAAAATCAGAATAGTCAACTGAATTGAATTGATTTGTTTTTTTGGATTTCATTCCGGTATCAATTGATAACTTTTTGTAACTTTGGTGTTACTGGTTGGTTTTTGGTAAGTAGCTCGATAATTTGATTTAACCAAAATTTATACATTAGTATTAGTTTAACCGAAAATTTGGTGTGATTGGGGTACGAATGTAATTTGAATTCTTGTAGGTTTTGTAAAGCTTTTTAGCCCATTAGGCTAAAAAATCTGACAAAAAAGTCATAAAACATAAAACTTGAAAAAGCCTATTAAGCAGAAAAAAAATCAATTTCAAACGAACTCTGTAATTGAAAATTAGAAGATTGAAATAAAAAGAAAAATCAAAATTGAATCGAAATATCGAATAATCACCCAAATGGGAAAGGAGATTATAAAGGGAAGACTCAATCCTCACTAAAAAGTAAAAATTCATATAACTAACTAATTGAGCTACATGCTATGGAATTTTTTTTGAATTCTTATAATGTTTGACTTGTTTCACCAACCCTAATATTTGTTACGATGATAATTATATAGTTTTTGTTTCTGCAGGGCCAAGCACTTATCTTTCTGATTTGTATTACTACATTTCTTATTGAAAGAAGTGTTGCTGGTATTTTTGATGTAACATGTTATGGCGCTTTTGGAGATGGAGTGCACGATGACACTCAAGTAATTTGATTCCTCATATGCTTGAAAAATACTGTGCAAAACGAATTCCCAACTTCTATACAATGATCAATGTTTTATAACTTGTGATTCCATGATCGATTATAGGCATTCAAACAAGTTTGGAGAGCTGCGTGTAGCGATGAAAATCCATCAATACTTATACCAAGTGAAAAATCATTTCTAGTAGGGCCTATAACATTTCAAGGGCCTTGTAAGTCAGCCAATATTCATCTACAAGTAAGTTATAAGCTGCTTCAACATTATTTTAATTGTACTTATTGCTGTTAAAAATTATTTTTGTAGAACCTAATTAGTGTCCTGATTATATGAATGAAAGTTTTTTATTAGTTTAAGCTTATGGTTTGCAGTTATTAGGATCCATTGTAGCACCCAAGGACCCAGTGGCATGGACAGGTTGTGAAAATGTATGTTGGATTTATTTTACAGGAGTTGCTGGTCTTTTTATCAATGGTTCTGGTACTATCAATGGCAATGGTCAACGATGGTGGGATACTCCTAGCCGTACCAGGGTGCGTGCCACAAGCTAAAACAGTTTCAAACCATGTTTTAATTGCTTTCATAAATATACTTACATGTAAGATTATTCATTTCAGGTCAACGGAACTTGCACTAAACCAACGGTATGTAGTTTCATATAATGCATGCAATCACTTTCTATTCAATTAAATAACATGGTTATCAAATTCACTTGCAGAAACATGAAATCAACTATGTAATTTTATCAGTAGTTGGTCGCGAAATAGCTCCTAACTCATTGATTTTTCATGTTACTCATCACTAAATGAGATTAGTATGAAATTTTTGTTATTTAAGTCAAAGCTAATTTCTTATAGTGAAATACAGGGCTGCGTGCGTCTAGTACGAATCACTACTTGATTTTCTTTTTCTCTCTTCTTTCAAATTTGTTAAAATTAATCCAATATGGAAGTTATCTATCCTTTAATAATAAAATAAATTTGATTTAATACTTGGTTTTGCACATCTGTTCCTTTTTGTAGGTTGTTCAATTTAATTACTGTAATGGACTTCGATTGAATGGAATAAAGCTAGTGAATAGTTCAAGGGACCATATAATTCTTACTTATAACAAGGGAGTAACGATCTCAAATATTCATATAAGTGCACCAAATTATAGTCGTAATACCGATGGTATCGATATCTTTTTCTCTAGACAAGTTCAAATTAGAGACTCCATTATTCAAACAGGTAAACTAGCTTGCATATAATGTTTTAATTTTTCTCTACTGAAAATAACTGTTTAATATTAATTATATATAATTTTTGATTTCTTACGCGAAAATTAATGAACTTACAAAGCAGGTGATGACTGCATTGGCATCAATACTGGATGCTCTGATATCAATATTACTGGTATTAGATGTGGACCAGGTCATGGTATAAGGTAGAACATGAACATTTTACTATTTTATTTAATTCTAAATAGAAAACTCAGTTTATTAACTAATACAATTTTATAATTTGTATGCAGTATTGGAAGTTTAGGTCCAAATAATACATTTGCTAATGTGGAAAACGTTTATATTACGAATTGCCACTTAGAGGATACCCAAAATGGTGTAAGAATTAAGACATGGCAGGTAACTAAAAGTATCACATTTCATTTTACACATGTTAGTGTGGTATTTTTTTTAAAAAATAATTATATGCCTATGTTGTTTTTTTCTCTAAAATATCTCTTCTTATGTGTTCATAGGGTGGTTCAGGATATGCTAGATCTATACATTTTGAGAATATTAACCTCAAAAATGTGGAAAACCCAATCATTATTGATCAAAATTATTGCAATAGTGTCCATTCATGTCAACCTCAGGTGAAAATAAAATAAAATAAAATATAATATCATTTTATTTTTAAATTTTCTAGAGAAGATAGAAATTTGAAAGTTATTTTTTGTTTTAAAAATGTTTGAACAGGTAAGTGCAGTTAAAGTGAGCAATGTAACATACAAGAAAATATATGGAACTACAAGCAGCAAGCTAGCAATAAAGATGAATTGTAGTAATAGCACAGCTTGCACTAATGTTGAGTTGGAGAATATATACATAACTTCAGTTGAGCCTGGAAAAAAGATTTTTGCTACTTGTAATAATGTTAAAGGAAAAGCTTCTTCAAACTCACCTCATGTATCTTGTTTGTCACAATGATAACTATATAGCAAAATATTTCTATAACCATTTTTTAAGACTGGTAATTAAATTTGACAAAAAAACTTAACTAGTGATCCACTAAGGTTTGGAGTTGAGTGAGTATTATCAGATACCTCACAATTGTT
CTGATTCACCGGCACAGCCATAATTCACACATCCAAACTGTTTCTACAATTTAATTCCTTCGATCGTTCGCCCACAGGCTCCTGTCCGAGTCCAGTTCCTGTAATCAGCTATGGAGGTTCGTATTCTTCAGCTCTTTCAGATTTGATTGTTCAGTTTTTAATTAGCTTAATGGATATTGAAATTTTTTCCGTTCAACAATGGTTGTTTATTAAATATTTTTCTTTGAAAAATACACGATAATACTTGCTAACTTCATGAAATGATTGAATAATTTTAATATTACTTTTTAATTACCCTTACTAGTAATCGTTGTTGTTTCCCTGTTATTCTCTGTCCCAATTCTAAAATTTATATATATTTATTTTTTATTATAAATCTTCTATATATTTTTTAATAACTTTGACTTGTTTATTAATATGACATATAATATTTTTTAAGTAATTTATAAATATATAAATTTAATTTTAAAAAATTAAATATTCAATACGTTTGATCAAATTTAAATTGAAAATGAAAAATATCACATAAATTGAAATAGAAAGAATTAATTTTTTATAAAATTATCTTTTCATTTATAGTTTATTAAAAATGAGTGAAACTTGAGGTACTATAGAAAAATTCAATCCTTAGTCTAGAAAAATTTGAGGTACTATAGAAATGATGTAAGAAAATTCACGTGATGAATATACTGCAAAAATCTTTCTGTTCTGATCGTTAGCTTTTCACTTTCCTCTTCTCTTTCCTATTTTTTTTGCTATTTGTTGTTTTGTTTTTTACTTTTTGGTGCTTTTGGTCAGTTGTGTTGAATTGGATGTACTTGTACATTCATTTCTCATTAAATAGAAGTTTTTATTTACAGAGAATAAAATCATCTCTATTTCTAATTGAAAACATATTAGATATAGTTGCACTTGCCCCTAAGATATTTTTTTTGGTCTAACTCATACACAAATTCTTTTGGATCTTTCTCCTCAGGTTTCTTAATTATGTAATTTTTTTATTAAATCATTAAATCACGCATAATTTATTTTTTAAAAATATTTTTGGCTGATTTTGATCAAACTTTTCTATTGTAAATGTCTTCAATGGTATCCACATTATAATGATTTTGCTTAAATGAATGAAGACAAATTGTGTATTATATTTATTTATTTATTAATGTAGTCAAATGACGTGAAGTAAAATACAATTATTCTTGAATATTTTCACTATCAATTAAACTAATGATTTCTGAATCAACATATTTATCCTCTATCAATATCCCTCACAAAATTTGATTATAGATTAGCCAATTTAAACAATTTTGAGTTGTGGAATTTTCAATATTAAGCTTTGAAGTCAATTTTGGTATGTTCAAAAAAAATTATGGTCAAACACTTCTTAATTTGGAACATTAACTAAGCAATTATTGTAGCCCATCTTCTTTTTCCATCTCATTCAAGGTGAAAATGATCTATTATGTCAGCCATATATCTTGATTTGTGCATCATACTAATCTTTAGTGTATTGTTTCAATTTTATAGAATTTTCTTGAAGGAACATGTCAGTTGTATAAATTAAAAAATAAATAGGAAAGGACTGATTTTTTAAAACTTTTTATGTGTGAATATATGATATAGTATACAGAGAATTTTTGACTAGAAGTTCAAAATTCTCTATCTTCTCGACTCCTTATTATACACTAGTTATGGGTTTTTATTTCTAAACATAATAAGTTTTTTCTTTCATAATTTTTTAAAAAAAATCAGAATAGTCAACTGAATTGAATTGATTTGTTTTTTTGGATTTCATTCCGGTATCAATTGATAACTTTTTGTAACTTTGGTGTTACTGGTTGGTTTTTGGTAAGTAGCTCGATAATTTGATTTAACCAAAATTTATACATTAGTATTAGTTTAACCGAAAATTTGGTGTGATTGGGGTACGAATGTAATTTGAATTCTTGTAGGTTTTGTAAAGCTTTTTAGCCCATTAGGCTAAAAAATCTGACAAAAAAGTCATAAAACATAAAACTTGAAAAAGCCTATTAAGCAGAAAAAAAATCAATTTCAAACGAACTCTGTAATTGAAAATTAGAAGATTGAAATAAAAAGAAAAATCAAAATTGAATCGAAATATCGAATAATCACCCAAATGGGAAAGGAGATTATAAAGGGAAGACTCAATCCTCACTAAAAAGTAAAAATTCATATAACTAACTAATTGAGCTACATGCTATGGAATTTTTTTTGAATTCTTATAATGTTTGACTTGTTTCACCAACCCTAATATTTGTTACGATGATAATTATATAGTTTTTGTTTCTGCAGGGCCAAGCACTTATCTTTCTGATTTGTATTACTACATTTCTTATTGAAAGAAGTGTTGCTGGTATTTTTGATGTAACATGTTATGGCGCTTTTGGAGATGGAGTGCACGATGACACTCAAGTAATTTGATTCCTCATATGCTTGAAAAATACTGTGCAAAACGAATTCCCAACTTCTATACAATGATCAATGTTTTATAACTTGTGATTCCATGATCGATTATAGGCATTCAAACAAGTTTGGAGAGCTGCGTGTAGCGATGAAAATCCATCAATACTTATACCAAGTGAAAAATCATTTCTAGTAGGGCCTATAACATTTCAAGGGCCTTGTAAGTCAGCCAATATTCATCTACAAGTAAGTTATAAGCTGCTTCAACATTATTTTAATTGTACTTATTGCTGTTAAAAATTATTTTTGTAGAACCTAATTAGTGTCCTGATTATATGAATGAAAGTTTTTTATTAGTTTAAGCTTATGGTTTGCAGTTATTAGGATCCATTGTAGCACCCAAGGACCCAGTGGCATGGACAGGTTGTGAAAATGTATGTTGGATTTATTTTACAGGAGTTGCTGGTCTTTTTATCAATGGTTCTGGTACTATCAATGGCAATGGTCAACGATGGTGGGATACTCCTAGCCGTACCAGGGTGCGTGCCACAAGCTAAAACAGTTTCAAACCATGTTTTAATTGCTTTCATAAATATACTTACATGTAAGATTATTCATTTCAGGTCAACGGAACTTGCACTAAACCAACGGTATGTAGTTTCATATAATGCATGCAATCACTTTCTATTCAATTAAATAACATGGTTATCAAATTCACTTGCAGAAACATGAAATCAACTATGTAATTTTATCAGTAGTTGGTCGCGAAATAGCTCCTAACTCATTGATTTTTCATGTTACTCATCACTAAATGAGATTAGTATGAAATTTTTGTTATTTAAGTCAAAGCTAATTTCTTATAGTGAAATACAGGGCTGCGTGCGTCTAGTACGAATCACTACTTGATTTTCTTTTTCTCTCTTCTTTCAAATTTGTTAAAATTAATCCAATATGGAAGTTATCTATCCTTTAATAATAAAATAAATTTGATTTAATACTTGGTTTTGCACATCTGTTCCTTTTTGTAGGTTGTTCAATTTAATTACTGTAATGGACTTCGATTGAATGGAATAAAGCTAGTGAATAGTTCAAGGGACCATATAATTCTTACTTATAACAAGGGAGTAACGATCTCAAATATTCATATAAGTGCACCAAATTATAGTCGTAATACCGATGGTATCGATATCTTTTTCTCTAGACAAGTTCAAATTAGAGACTCCATTATTCAAACAGGTAAACTAGCTTGCATATAATGTTTTAATTTTTCTCTACTGAAAATAACTGTTTAATATTAATTATATATAATTTTTGATTTCTTACGCGAAAATTAATGAACTTACAAAGCAGGTGATGACTGCATTGGCATCAATACTGGATGCTCTGATATCAATATTACTGGTATTAGATGTGGACCAGGTCATGGTATAAGGTAGAACATGAACATTTTACTATTTTATTTAATTCTAAATAGAAAACTCAGTTTATTAACTAATACAATTTTATAATTTGTATGCAGTATTGGAAGTTTAGGTCCAAATAATACATTTGCTAATGTGGAAAACGTTTATATTACGAATTGCCACTTAGAGGATACCCAAAATGGTGTAAGAATTAAGACATGGCAGGTAACTAAAAGTATCACATTTCATTTTACACATGTTAGTGTGGTATTTTTTTTAAAAAATAATTATATGCCTATGTTGTTTTTTTCTCTAAAATATCTCTTCTTATGTGTTCATAGGGTGGTTCAGGATATGCTAGATCTATACATTTTGAGAATATTAACCTCAAAAATGTGGAAAACCCAATCATTATTGATCAAAATTATTGCAATAGTGTCCATTCATGTCAACCTCAGGTGAAAATAAAATAAAATAAAATATAATATCATTTTATTTTTAAATTTTCTAGAGAAGATAGAAATTTGAAAGTTATTTTTTGTTTTAAAAATGTTTGAACAGGTAAGTGCAGTTAAAGTGAGCAATGTAACATACAAGAAAATATATGGAACTACAAGCAGCAAGCTAGCAATAAAGATGAATTGTAGTAATAGCACAGCTTGCACTAATGTTGAGTTGGAGAATATATACATAACTTCAGTTGAGCCTGGAAAAAAGATTTTTGCTACTTGTAATAATGTTAAAGGAAAAGCTTCTTCAAACTCACCTCATGTATCTTGTTTGTCACAATGATAACTATATAGCAAAATATTTCTATAACCATTTTTTAAGACTGGTAATTAAATTTGACAAAAAAACTTAACTAGTGATCCACTAAGGTTTGGAGTTGAGTGAGTATTATCAGATACCTCACAATTGTT
| Download sequence region |
Get flanking sequences on SL2.50ch08
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mRNA Solyc08g060970.2.1
mRNA Solyc08g060970.2.1
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Ontology terms
Ontology terms
| terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc08g060970.2.1 Polygalacturonase (AHRD V1 **-* Q9ZPI8_SOLLC); contains Interpro domain(s) IPR012334 Pectin lyase fold
CTGATTCACCGGCACAGCCATAATTCACACATCCAAACTGTTTCTACAATTTAATTCCTTCGATCGTTCGCCCACAGGCTCCTGTCCGAGTCCAGTTCCTGTAATCAGCTATGGAGGGCCAAGCACTTATCTTTCTGATTTGTATTACTACATTTCTTATTGAAAGAAGTGTTGCTGGTATTTTTGATGTAACATGTTATGGCGCTTTTGGAGATGGAGTGCACGATGACACTCAAGCATTCAAACAAGTTTGGAGAGCTGCGTGTAGCGATGAAAATCCATCAATACTTATACCAAGTGAAAAATCATTTCTAGTAGGGCCTATAACATTTCAAGGGCCTTGTAAGTCAGCCAATATTCATCTACAATTATTAGGATCCATTGTAGCACCCAAGGACCCAGTGGCATGGACAGGTTGTGAAAATGTATGTTGGATTTATTTTACAGGAGTTGCTGGTCTTTTTATCAATGGTTCTGGTACTATCAATGGCAATGGTCAACGATGGTGGGATACTCCTAGCCGTACCAGGGTCAACGGAACTTGCACTAAACCAACGGTTGTTCAATTTAATTACTGTAATGGACTTCGATTGAATGGAATAAAGCTAGTGAATAGTTCAAGGGACCATATAATTCTTACTTATAACAAGGGAGTAACGATCTCAAATATTCATATAAGTGCACCAAATTATAGTCGTAATACCGATGGTATCGATATCTTTTTCTCTAGACAAGTTCAAATTAGAGACTCCATTATTCAAACAGGTGATGACTGCATTGGCATCAATACTGGATGCTCTGATATCAATATTACTGGTATTAGATGTGGACCAGGTCATGGTATAAGTATTGGAAGTTTAGGTCCAAATAATACATTTGCTAATGTGGAAAACGTTTATATTACGAATTGCCACTTAGAGGATACCCAAAATGGTGTAAGAATTAAGACATGGCAGGGTGGTTCAGGATATGCTAGATCTATACATTTTGAGAATATTAACCTCAAAAATGTGGAAAACCCAATCATTATTGATCAAAATTATTGCAATAGTGTCCATTCATGTCAACCTCAGGTAAGTGCAGTTAAAGTGAGCAATGTAACATACAAGAAAATATATGGAACTACAAGCAGCAAGCTAGCAATAAAGATGAATTGTAGTAATAGCACAGCTTGCACTAATGTTGAGTTGGAGAATATATACATAACTTCAGTTGAGCCTGGAAAAAAGATTTTTGCTACTTGTAATAATGTTAAAGGAAAAGCTTCTTCAAACTCACCTCATGTATCTTGTTTGTCACAATGATAACTATATAGCAAAATATTTCTATAACCATTTTTTAAGACTGGTAATTAAATTTGACAAAAAAACTTAACTAGTGATCCACTAAGGTTTGGAGTTGAGTGAGTATTATCAGATACCTCACAATTGTT
CTGATTCACCGGCACAGCCATAATTCACACATCCAAACTGTTTCTACAATTTAATTCCTTCGATCGTTCGCCCACAGGCTCCTGTCCGAGTCCAGTTCCTGTAATCAGCTATGGAGGGCCAAGCACTTATCTTTCTGATTTGTATTACTACATTTCTTATTGAAAGAAGTGTTGCTGGTATTTTTGATGTAACATGTTATGGCGCTTTTGGAGATGGAGTGCACGATGACACTCAAGCATTCAAACAAGTTTGGAGAGCTGCGTGTAGCGATGAAAATCCATCAATACTTATACCAAGTGAAAAATCATTTCTAGTAGGGCCTATAACATTTCAAGGGCCTTGTAAGTCAGCCAATATTCATCTACAATTATTAGGATCCATTGTAGCACCCAAGGACCCAGTGGCATGGACAGGTTGTGAAAATGTATGTTGGATTTATTTTACAGGAGTTGCTGGTCTTTTTATCAATGGTTCTGGTACTATCAATGGCAATGGTCAACGATGGTGGGATACTCCTAGCCGTACCAGGGTCAACGGAACTTGCACTAAACCAACGGTTGTTCAATTTAATTACTGTAATGGACTTCGATTGAATGGAATAAAGCTAGTGAATAGTTCAAGGGACCATATAATTCTTACTTATAACAAGGGAGTAACGATCTCAAATATTCATATAAGTGCACCAAATTATAGTCGTAATACCGATGGTATCGATATCTTTTTCTCTAGACAAGTTCAAATTAGAGACTCCATTATTCAAACAGGTGATGACTGCATTGGCATCAATACTGGATGCTCTGATATCAATATTACTGGTATTAGATGTGGACCAGGTCATGGTATAAGTATTGGAAGTTTAGGTCCAAATAATACATTTGCTAATGTGGAAAACGTTTATATTACGAATTGCCACTTAGAGGATACCCAAAATGGTGTAAGAATTAAGACATGGCAGGGTGGTTCAGGATATGCTAGATCTATACATTTTGAGAATATTAACCTCAAAAATGTGGAAAACCCAATCATTATTGATCAAAATTATTGCAATAGTGTCCATTCATGTCAACCTCAGGTAAGTGCAGTTAAAGTGAGCAATGTAACATACAAGAAAATATATGGAACTACAAGCAGCAAGCTAGCAATAAAGATGAATTGTAGTAATAGCACAGCTTGCACTAATGTTGAGTTGGAGAATATATACATAACTTCAGTTGAGCCTGGAAAAAAGATTTTTGCTACTTGTAATAATGTTAAAGGAAAAGCTTCTTCAAACTCACCTCATGTATCTTGTTTGTCACAATGATAACTATATAGCAAAATATTTCTATAACCATTTTTTAAGACTGGTAATTAAATTTGACAAAAAAACTTAACTAGTGATCCACTAAGGTTTGGAGTTGAGTGAGTATTATCAGATACCTCACAATTGTT
Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc08g060970.2.1 Polygalacturonase (AHRD V1 **-* Q9ZPI8_SOLLC); contains Interpro domain(s) IPR012334 Pectin lyase fold
MEGQALIFLICITTFLIERSVAGIFDVTCYGAFGDGVHDDTQAFKQVWRAACSDENPSILIPSEKSFLVGPITFQGPCKSANIHLQLLGSIVAPKDPVAWTGCENVCWIYFTGVAGLFINGSGTINGNGQRWWDTPSRTRVNGTCTKPTVVQFNYCNGLRLNGIKLVNSSRDHIILTYNKGVTISNIHISAPNYSRNTDGIDIFFSRQVQIRDSIIQTGDDCIGINTGCSDINITGIRCGPGHGISIGSLGPNNTFANVENVYITNCHLEDTQNGVRIKTWQGGSGYARSIHFENINLKNVENPIIIDQNYCNSVHSCQPQVSAVKVSNVTYKKIYGTTSSKLAIKMNCSNSTACTNVELENIYITSVEPGKKIFATCNNVKGKASSNSPHVSCLSQ*
MEGQALIFLICITTFLIERSVAGIFDVTCYGAFGDGVHDDTQAFKQVWRAACSDENPSILIPSEKSFLVGPITFQGPCKSANIHLQLLGSIVAPKDPVAWTGCENVCWIYFTGVAGLFINGSGTINGNGQRWWDTPSRTRVNGTCTKPTVVQFNYCNGLRLNGIKLVNSSRDHIILTYNKGVTISNIHISAPNYSRNTDGIDIFFSRQVQIRDSIIQTGDDCIGINTGCSDINITGIRCGPGHGISIGSLGPNNTFANVENVYITNCHLEDTQNGVRIKTWQGGSGYARSIHFENINLKNVENPIIIDQNYCNSVHSCQPQVSAVKVSNVTYKKIYGTTSSKLAIKMNCSNSTACTNVELENIYITSVEPGKKIFATCNNVKGKASSNSPHVSCLSQ*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
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GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
AF118567 Lycopersicon esculentum polygalacturonase mRNA, complete cds.
| Other genome matches | None |
Literature annotations [1]
Literature annotations [1]
| [Associate publication] [Matching publications] |
A wound- and systemin-inducible polygalacturonase in tomato leaves.
Proceedings of the National Academy of Sciences of the United States of America (1999)
Show / hide abstract
Show / hide abstract
Oligogalacturonide fragments that activate defensive genes in plant leaves heretofore have been thought to be generated only by pathogen-derived pectin-degrading enzymes, because polygalacturonase (PG) activity has not been reported in leaves. Here, we report that mRNAs encoding a PG catalytic subunit protein and its regulatory (beta-subunit) protein are expressed in tomato leaves in response to wounding, systemin, and oligosaccharide elicitors. Synthesis of the two subunits in response to wounding is systemic and is accompanied by an increase in PG activity in extracts from both wounded and unwounded leaves. The finding that PG subunit mRNAs and PG enzyme activity are induced by wounding indicates that herbivore attacks can produce endogenous oligogalacturonide elicitors that may be involved in the local and systemic activation of defense responses against both herbivores and pathogens.
Bergey, DR. Orozco-Cardenas, M. de Moura, DS. Ryan, CA.
Proceedings of the National Academy of Sciences of the United States of America.
1999.
96(4).
1756-60.
Ontology annotations (3)
Ontology annotations (3)
| [Add ontology annotations] |
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