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Tomato locus endo-1,4-beta-glucanase precursor (Cel2)
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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endo-1,4-beta-glucanase precursor (Cel2) is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch09, position: 3600451
Please cite Razifard et al.
| Registry name: | None | [Associate registry name] |
Notes and figures (0)
Notes and figures (0)
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Accessions and images (0)
| [Associate accession] |
Accession name:
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| Alleles (0) | None | [Add new Allele] |
Associated loci (0)
Associated loci (0)
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| Associated loci - graphical view | None |
SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc09g010210.2 SL2.50ch09:3596732..3601979
ATGGCGCCAAAATATACCTCCATCATTTTCCTCTTCCTTCTCTTCAACTCCTTTTCATGTTCATTCGGAGGGGGTCATGATTATCATGACGCCCTCCGAAAAAGCATCCTGTTCTACGAAGGACAACGATCCGGAAAATTACCGCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCATTACACGACGGTGCTTCCGCCGGAGTAAGTAGTATAATAACAATCAAAATACATCCGTAATTTTTTGATTTTCCAAACATTTTACCTGGATCGAATTTTTTTTTTCGTTACAGGTTGATTTGACAGGAGGCTATTACGATGCCGGAGATAATGTGAAATTTGTTTTTCCGATGGCGTTTACGACGACATTGTTATCGTGGAGTATAATTGATTTTAAAAGGAATATAGGGAATGAATTGGGTAATGCAGTGAAGGCGGTGAAATGGGGAACTGATTTTCTGTTGAAAGCTACGGCGAGAGATGGAGTGATATATGTACAAGTTGGTGATGCGTTTTCAGATCACAGTTGTTGGGAGAGACCAGAAGATATGGATACATTAAGAACTGTTTATAAAATTGATGCGAATAATCCCGGTTCCGATGTCGCCGGTGAAATCGCTGCTGCATTAGCTGCTGCATCCATTGTTTTCCGTTCACTGGATTCTTCCTACTCAAATCTACTGCTTGATCGCGCTGTTAAAGTAAGGAAAAAATATATTTTATGCTTTTAATAATTGACTTTGCTTTGTGAATAAACGAATAATAAGTAACATGTTTTTGGTGCATTGGTTTTTCTTTTTTTTCTTTTACATTTTCGAATAATTATGTATTAAAATAATTTAGAAAATCCAGGATTGGTTTGATTCACTCTGTAAAGTCTAAAAAGTAAAATGCTTTGGGCAGTGTTGTGTTAGTGTCTTTTTTTCTCTGCTGGTTGAACTGGCATTAAATAAGTGTTGTTGACTGCATTTGCTTATTAGTTATACATATATATATTAATATTGTATATAAAAGAAATTATTTTTTCTAATATAGCCTACGAAACGATCCGTTAAGTTACTGTCTAGTATGGACATATAAAGTTTGTTTTGCATGTGAACAAGGACTTGTTGGGTGGGGTGGGGTGGGTGGGTGGGATTATTAACTCTAAACAAAATCTTGCTATTAGAATCATGAAGATTGATTTACACATGCATCTTAATCTATATATGTGAACATTTAAATTTGATGAACATATTTATGTATAGTCACAAAAATAGGTTTGTCTAACCAATTATGTAAAGTTCTAAAATGTCACTGTCATCTAGCAGAAAAAAGCTAAAAATAAAAAAAAAGAATATGACCGTTGTAATAAAATCAGTCTTTTGGTTGCTTTTGTAGGTTTTCGATTTTGCCAATAGACATAGAGGTGCATACAGCTCCAGCCTACACTCTGCTGTTTGCCCTTTCTATTGTGACTTTAATGGTTATCAGGTAAACTCTTGTATAATATATAAACGTGTCCTTAATCTAGTCTTAACTTATATTTATATTCTCCTACATATGTATTCTTTAATTTTGTATATGTATAAATAGACACTTAAAGTTGAATAAGTAGATACACAAGTCTTGCGTGACATGATATATGTATGAGACATGCGCATATCTCGCATAATAGATAAATATGTCCTTAATATGATCTTAGCTTGTATCTACACCCTCCTATATATGTATCCTTAAATTTTGTATATGTAATAGTAGTCACTTAAAGTTGAATAAGTAGAACACAGGTCCCGCATGACATGATATATGTAGGAGCTATGTGTTTATCTAGCATAACACATTACTGTGTTCTTAAACTGGTATATCCTTCAATACTGCGCACACGAAAGTTGACACTTAAATGTGTGTAAAGTAGAATAAGTAGAAACACACACACATATAGGGCACATTTGTTTATTTTGCATAATACATAAACGTGTTCTTAAATTGGTGTTAGCTGATATCTATATCCTTTAATTTTACGCCCACATAAGTCGACACTTAAATATGTATAAAATTAAGAAAGTAAGCACACAACTTACATGACGTAATATATATATGACGCACGTGTCTACTTATTCCGAGTCAAAATTAGTAATGTTTGACATAAAATTTGGGTGAGAATGTACAGGATGAATTGCTTTGGGGTGCAGCATGGTTACATAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAAAATGAAGTAATTTTAAGAGCAGGAGATACAATTAATGAATTTGGTTGGGACAACAAACATGCTGGTATTAATGTCCTTATTTCCAAGGTTAGTAATTTAATTAATTAATTTATCTATGGATAAGGAGACATTATTAGTACTTAATTAATTGTATTACTTTTTTTTTCTCATTACATAATAATCTGTCCTTGTCTCATTTACAACTTAGATATATTCTTGTGATATCTATTCTTGACTTGTTCAGTCTGCCAATCACATGCTGTAGATAGATAGATATAGTTATCCATATCAGAATGTCCATTTAGTGGGCCCACTCTTAATTTGAAAATTAACGTAAAACTGCTTCATCTTAAAATATTAATCAAATGATTCACTGAATAAATATCGAAAGGAAAAAGAGTAGGTTCAATCATAACAAGTAACTAAGCACATTGATATTTTTTCCCTCTTAAAACAAATTTCAAAACTCTAATCATCATTAATTTTGTGTATGTGTGTAATTATTCCACATGACAGAGTTTTGGTTATTATGGGCTCCATGTGTGTTTGGTGTTCAAACTTAACTTATTTGCATCAACATACACATACATAAAATTAAAATTATAAAATGAAAAAAAGAAGGTGAAAGCTGTATATAGAAGTGCTCCATGTGAAGTGTGTGGACAAAAAATGATACAAAATTAAAATGAGACAAAAAAAAAGTGAGGTTGGTAATAGTCCTTCATGAAGTAATAAAGAGCAAGAGAAGTGACTTTACTAGTGGTAAGCATGTGCAAAAAGACAGTTGCTTATCTATATATATATATACATACTTTCATACGGAGAAAGTTAGAGTTATGATACAAGTGGACCTCTCGATTGAAGTGTTGATTATGAATTATCAATTATCGTTCAGGTTTAATAGTGGAGTCAGAATTTTTTTACAAAAAAGTTCTATATTATATAAGAAATAATTTGAATCATGTATAAATAGTATAAGTTGGCTCTGACCTGTCTTCGTCGCAAGTTTATGTAATGTAATTTAACTTGAAACAAATTTTAAGAAAGAAAGACTAATTTCTGAAACTATCAAGACTACGGAGTAATATTTTGACTAAGTTCATTTCATTAATTAAATTATTACTAAATATAGTAAAGTATACGACAGAAAAAATAAATGAGTCGTATATATTAAAACATTGCGAGTAATATTTTATGTAAGTCCCCCAACCCTCAATCTTATATTGTTCGGACTCTTCAAAGATATTAATGGATGTGTGTCGAATTTTTCAAGAGTAATATATATTTTGAAAAATCTGACAAAATAAAACATCGAAACTGAAGACTCTGACAAGTTACATTTGTGCTTAGATTCTCCTTATCTCATGGAATTATACTAATCTCAACTAGTTGGAATATAAAGTTTTAATATTTCAAATAATTTTTTTATTTTATTTTTGACAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAATCATTTCAAGTAAATGCAGATGCATTCATTTGTTCAATATTACCTGGAATTTCTCATCCCCAAGTCCAATATTCTCCAGGTAAATTGGGAATAGTTAATTAATTAATAATAAACCATTTATTAAATTAAATTACTAATGTTTTTTTGTTTGTCATTTTATTGTTGTTTGTGTGTGAAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCATGTGACATCTTTGTCCTTCTTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCATGTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGTCAGGTACTACTCTCTTCGTCTTAATTTATCTGATACAGTTTAACTATATACAAAGTTTAAGTAATGTAAAAAACAACTTTTACAGAGGAAAATATTTTTCAGTTTTTCCATGTTTGATCGGTCAAAACGTTAAAGAAATGAGGAAAACAAGTTACACAAGTGATATTCTGGATATATTGTCTTCTCTCTACTCACTCGATCCCTCAACCTAAGTCATTCTCGAACCCCCACTCCCCATCTCATCTCGTTTACTTACTCTATAGAAATTAGAACGCAAGTAAAGAAATCTACTTTTTGCGTGTGTGTGTTTAGTATAGAGGAAAATGTTTTTCAATTTTTTCATATTTGATCGGTCAAAACGTTAAAGAAATGAGGAAATTTTTTGACTTTTCTAGAAAGAAAAAAAAGTAGGAAAAACAAGTTACACAAGTGATATTCTGGATATATTGTCTTCTCCACACTCACTCGATCCCTCAACCTTTATTCATCCTCGAACCCCCACTCCCCATCTCATCTCGTTTACTTAGAACACAAGTAAAGAAATCTACTTATTTTTTCATGAAAACATAATGATTTTTTTTTGAAACAGACTAAAGAGTGGTTATGAATTGTTGTAGGTGGATTATATTCTGGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGTCCACATTACCCACAAAGGATTCACCATAGGGGTAGCTCTGTGCCATCTGTGGCCACACATTCAGCACGTATTGGTTGCAAAGAGGGATCTCGATACTTTTTTTCACCAAACCCAAACCCAAATCGATTAATTGGTGCTGTTGTTGGAGGGCCAAATTTAACAGACTCGTTCCCAGACGCCAGACCCTATTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTAGTGGGCCTATTGGCTTACTTTGCAGCCCATTCTAATTGATATAAACATGTGTAAAGAGAGAATGTAGTGGTGTGCAAAGGCCACCCTCTCTATTATTGTGTTGTTGTTGTCTAATAGGACTAATGTTGTTGTTTTTTAATCCCACTATATATATATATATTATATTAATACAAAAAAAGAATATCTTATCCCATCTTTTGTCTAAGAAAAAGAAAGATATCTAATGAACAAGGGATTTGTACTTTTGAAATTGTAGTGGAAGTTGTTTTTATCTTATTATACATGAAAATTGTTTTGAATA
ATGGCGCCAAAATATACCTCCATCATTTTCCTCTTCCTTCTCTTCAACTCCTTTTCATGTTCATTCGGAGGGGGTCATGATTATCATGACGCCCTCCGAAAAAGCATCCTGTTCTACGAAGGACAACGATCCGGAAAATTACCGCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCATTACACGACGGTGCTTCCGCCGGAGTAAGTAGTATAATAACAATCAAAATACATCCGTAATTTTTTGATTTTCCAAACATTTTACCTGGATCGAATTTTTTTTTTCGTTACAGGTTGATTTGACAGGAGGCTATTACGATGCCGGAGATAATGTGAAATTTGTTTTTCCGATGGCGTTTACGACGACATTGTTATCGTGGAGTATAATTGATTTTAAAAGGAATATAGGGAATGAATTGGGTAATGCAGTGAAGGCGGTGAAATGGGGAACTGATTTTCTGTTGAAAGCTACGGCGAGAGATGGAGTGATATATGTACAAGTTGGTGATGCGTTTTCAGATCACAGTTGTTGGGAGAGACCAGAAGATATGGATACATTAAGAACTGTTTATAAAATTGATGCGAATAATCCCGGTTCCGATGTCGCCGGTGAAATCGCTGCTGCATTAGCTGCTGCATCCATTGTTTTCCGTTCACTGGATTCTTCCTACTCAAATCTACTGCTTGATCGCGCTGTTAAAGTAAGGAAAAAATATATTTTATGCTTTTAATAATTGACTTTGCTTTGTGAATAAACGAATAATAAGTAACATGTTTTTGGTGCATTGGTTTTTCTTTTTTTTCTTTTACATTTTCGAATAATTATGTATTAAAATAATTTAGAAAATCCAGGATTGGTTTGATTCACTCTGTAAAGTCTAAAAAGTAAAATGCTTTGGGCAGTGTTGTGTTAGTGTCTTTTTTTCTCTGCTGGTTGAACTGGCATTAAATAAGTGTTGTTGACTGCATTTGCTTATTAGTTATACATATATATATTAATATTGTATATAAAAGAAATTATTTTTTCTAATATAGCCTACGAAACGATCCGTTAAGTTACTGTCTAGTATGGACATATAAAGTTTGTTTTGCATGTGAACAAGGACTTGTTGGGTGGGGTGGGGTGGGTGGGTGGGATTATTAACTCTAAACAAAATCTTGCTATTAGAATCATGAAGATTGATTTACACATGCATCTTAATCTATATATGTGAACATTTAAATTTGATGAACATATTTATGTATAGTCACAAAAATAGGTTTGTCTAACCAATTATGTAAAGTTCTAAAATGTCACTGTCATCTAGCAGAAAAAAGCTAAAAATAAAAAAAAAGAATATGACCGTTGTAATAAAATCAGTCTTTTGGTTGCTTTTGTAGGTTTTCGATTTTGCCAATAGACATAGAGGTGCATACAGCTCCAGCCTACACTCTGCTGTTTGCCCTTTCTATTGTGACTTTAATGGTTATCAGGTAAACTCTTGTATAATATATAAACGTGTCCTTAATCTAGTCTTAACTTATATTTATATTCTCCTACATATGTATTCTTTAATTTTGTATATGTATAAATAGACACTTAAAGTTGAATAAGTAGATACACAAGTCTTGCGTGACATGATATATGTATGAGACATGCGCATATCTCGCATAATAGATAAATATGTCCTTAATATGATCTTAGCTTGTATCTACACCCTCCTATATATGTATCCTTAAATTTTGTATATGTAATAGTAGTCACTTAAAGTTGAATAAGTAGAACACAGGTCCCGCATGACATGATATATGTAGGAGCTATGTGTTTATCTAGCATAACACATTACTGTGTTCTTAAACTGGTATATCCTTCAATACTGCGCACACGAAAGTTGACACTTAAATGTGTGTAAAGTAGAATAAGTAGAAACACACACACATATAGGGCACATTTGTTTATTTTGCATAATACATAAACGTGTTCTTAAATTGGTGTTAGCTGATATCTATATCCTTTAATTTTACGCCCACATAAGTCGACACTTAAATATGTATAAAATTAAGAAAGTAAGCACACAACTTACATGACGTAATATATATATGACGCACGTGTCTACTTATTCCGAGTCAAAATTAGTAATGTTTGACATAAAATTTGGGTGAGAATGTACAGGATGAATTGCTTTGGGGTGCAGCATGGTTACATAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAAAATGAAGTAATTTTAAGAGCAGGAGATACAATTAATGAATTTGGTTGGGACAACAAACATGCTGGTATTAATGTCCTTATTTCCAAGGTTAGTAATTTAATTAATTAATTTATCTATGGATAAGGAGACATTATTAGTACTTAATTAATTGTATTACTTTTTTTTTCTCATTACATAATAATCTGTCCTTGTCTCATTTACAACTTAGATATATTCTTGTGATATCTATTCTTGACTTGTTCAGTCTGCCAATCACATGCTGTAGATAGATAGATATAGTTATCCATATCAGAATGTCCATTTAGTGGGCCCACTCTTAATTTGAAAATTAACGTAAAACTGCTTCATCTTAAAATATTAATCAAATGATTCACTGAATAAATATCGAAAGGAAAAAGAGTAGGTTCAATCATAACAAGTAACTAAGCACATTGATATTTTTTCCCTCTTAAAACAAATTTCAAAACTCTAATCATCATTAATTTTGTGTATGTGTGTAATTATTCCACATGACAGAGTTTTGGTTATTATGGGCTCCATGTGTGTTTGGTGTTCAAACTTAACTTATTTGCATCAACATACACATACATAAAATTAAAATTATAAAATGAAAAAAAGAAGGTGAAAGCTGTATATAGAAGTGCTCCATGTGAAGTGTGTGGACAAAAAATGATACAAAATTAAAATGAGACAAAAAAAAAGTGAGGTTGGTAATAGTCCTTCATGAAGTAATAAAGAGCAAGAGAAGTGACTTTACTAGTGGTAAGCATGTGCAAAAAGACAGTTGCTTATCTATATATATATATACATACTTTCATACGGAGAAAGTTAGAGTTATGATACAAGTGGACCTCTCGATTGAAGTGTTGATTATGAATTATCAATTATCGTTCAGGTTTAATAGTGGAGTCAGAATTTTTTTACAAAAAAGTTCTATATTATATAAGAAATAATTTGAATCATGTATAAATAGTATAAGTTGGCTCTGACCTGTCTTCGTCGCAAGTTTATGTAATGTAATTTAACTTGAAACAAATTTTAAGAAAGAAAGACTAATTTCTGAAACTATCAAGACTACGGAGTAATATTTTGACTAAGTTCATTTCATTAATTAAATTATTACTAAATATAGTAAAGTATACGACAGAAAAAATAAATGAGTCGTATATATTAAAACATTGCGAGTAATATTTTATGTAAGTCCCCCAACCCTCAATCTTATATTGTTCGGACTCTTCAAAGATATTAATGGATGTGTGTCGAATTTTTCAAGAGTAATATATATTTTGAAAAATCTGACAAAATAAAACATCGAAACTGAAGACTCTGACAAGTTACATTTGTGCTTAGATTCTCCTTATCTCATGGAATTATACTAATCTCAACTAGTTGGAATATAAAGTTTTAATATTTCAAATAATTTTTTTATTTTATTTTTGACAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAATCATTTCAAGTAAATGCAGATGCATTCATTTGTTCAATATTACCTGGAATTTCTCATCCCCAAGTCCAATATTCTCCAGGTAAATTGGGAATAGTTAATTAATTAATAATAAACCATTTATTAAATTAAATTACTAATGTTTTTTTGTTTGTCATTTTATTGTTGTTTGTGTGTGAAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCATGTGACATCTTTGTCCTTCTTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCATGTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGTCAGGTACTACTCTCTTCGTCTTAATTTATCTGATACAGTTTAACTATATACAAAGTTTAAGTAATGTAAAAAACAACTTTTACAGAGGAAAATATTTTTCAGTTTTTCCATGTTTGATCGGTCAAAACGTTAAAGAAATGAGGAAAACAAGTTACACAAGTGATATTCTGGATATATTGTCTTCTCTCTACTCACTCGATCCCTCAACCTAAGTCATTCTCGAACCCCCACTCCCCATCTCATCTCGTTTACTTACTCTATAGAAATTAGAACGCAAGTAAAGAAATCTACTTTTTGCGTGTGTGTGTTTAGTATAGAGGAAAATGTTTTTCAATTTTTTCATATTTGATCGGTCAAAACGTTAAAGAAATGAGGAAATTTTTTGACTTTTCTAGAAAGAAAAAAAAGTAGGAAAAACAAGTTACACAAGTGATATTCTGGATATATTGTCTTCTCCACACTCACTCGATCCCTCAACCTTTATTCATCCTCGAACCCCCACTCCCCATCTCATCTCGTTTACTTAGAACACAAGTAAAGAAATCTACTTATTTTTTCATGAAAACATAATGATTTTTTTTTGAAACAGACTAAAGAGTGGTTATGAATTGTTGTAGGTGGATTATATTCTGGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGTCCACATTACCCACAAAGGATTCACCATAGGGGTAGCTCTGTGCCATCTGTGGCCACACATTCAGCACGTATTGGTTGCAAAGAGGGATCTCGATACTTTTTTTCACCAAACCCAAACCCAAATCGATTAATTGGTGCTGTTGTTGGAGGGCCAAATTTAACAGACTCGTTCCCAGACGCCAGACCCTATTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTAGTGGGCCTATTGGCTTACTTTGCAGCCCATTCTAATTGATATAAACATGTGTAAAGAGAGAATGTAGTGGTGTGCAAAGGCCACCCTCTCTATTATTGTGTTGTTGTTGTCTAATAGGACTAATGTTGTTGTTTTTTAATCCCACTATATATATATATATTATATTAATACAAAAAAAGAATATCTTATCCCATCTTTTGTCTAAGAAAAAGAAAGATATCTAATGAACAAGGGATTTGTACTTTTGAAATTGTAGTGGAAGTTGTTTTTATCTTATTATACATGAAAATTGTTTTGAATA
| Download sequence region |
Get flanking sequences on SL2.50ch09
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mRNA Solyc09g010210.2.1
mRNA Solyc09g010210.2.1
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Ontology terms
Ontology terms
| terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc09g010210.2.1 Endoglucanase 1 (AHRD V1 ***- B6TRZ3_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9
ATGGCGCCAAAATATACCTCCATCATTTTCCTCTTCCTTCTCTTCAACTCCTTTTCATGTTCATTCGGAGGGGGTCATGATTATCATGACGCCCTCCGAAAAAGCATCCTGTTCTACGAAGGACAACGATCCGGAAAATTACCGCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCATTACACGACGGTGCTTCCGCCGGAGTTGATTTGACAGGAGGCTATTACGATGCCGGAGATAATGTGAAATTTGTTTTTCCGATGGCGTTTACGACGACATTGTTATCGTGGAGTATAATTGATTTTAAAAGGAATATAGGGAATGAATTGGGTAATGCAGTGAAGGCGGTGAAATGGGGAACTGATTTTCTGTTGAAAGCTACGGCGAGAGATGGAGTGATATATGTACAAGTTGGTGATGCGTTTTCAGATCACAGTTGTTGGGAGAGACCAGAAGATATGGATACATTAAGAACTGTTTATAAAATTGATGCGAATAATCCCGGTTCCGATGTCGCCGGTGAAATCGCTGCTGCATTAGCTGCTGCATCCATTGTTTTCCGTTCACTGGATTCTTCCTACTCAAATCTACTGCTTGATCGCGCTGTTAAAGTTTTCGATTTTGCCAATAGACATAGAGGTGCATACAGCTCCAGCCTACACTCTGCTGTTTGCCCTTTCTATTGTGACTTTAATGGTTATCAGGATGAATTGCTTTGGGGTGCAGCATGGTTACATAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAAAATGAAGTAATTTTAAGAGCAGGAGATACAATTAATGAATTTGGTTGGGACAACAAACATGCTGGTATTAATGTCCTTATTTCCAAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAATCATTTCAAGTAAATGCAGATGCATTCATTTGTTCAATATTACCTGGAATTTCTCATCCCCAAGTCCAATATTCTCCAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCATGTGACATCTTTGTCCTTCTTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCATGTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGTCAGGTGGATTATATTCTGGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGTCCACATTACCCACAAAGGATTCACCATAGGGGTAGCTCTGTGCCATCTGTGGCCACACATTCAGCACGTATTGGTTGCAAAGAGGGATCTCGATACTTTTTTTCACCAAACCCAAACCCAAATCGATTAATTGGTGCTGTTGTTGGAGGGCCAAATTTAACAGACTCGTTCCCAGACGCCAGACCCTATTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTAGTGGGCCTATTGGCTTACTTTGCAGCCCATTCTAATTGATATAAACATGTGTAAAGAGAGAATGTAGTGGTGTGCAAAGGCCACCCTCTCTATTATTGTGTTGTTGTTGTCTAATAGGACTAATGTTGTTGTTTTTTAATCCCACTATATATATATATATTATATTAATACAAAAAAAGAATATCTTATCCCATCTTTTGTCTAAGAAAAAGAAAGATATCTAATGAACAAGGGATTTGTACTTTTGAAATTGTAGTGGAAGTTGTTTTTATCTTATTATACATGAAAATTGTTTTGAATA
ATGGCGCCAAAATATACCTCCATCATTTTCCTCTTCCTTCTCTTCAACTCCTTTTCATGTTCATTCGGAGGGGGTCATGATTATCATGACGCCCTCCGAAAAAGCATCCTGTTCTACGAAGGACAACGATCCGGAAAATTACCGCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCATTACACGACGGTGCTTCCGCCGGAGTTGATTTGACAGGAGGCTATTACGATGCCGGAGATAATGTGAAATTTGTTTTTCCGATGGCGTTTACGACGACATTGTTATCGTGGAGTATAATTGATTTTAAAAGGAATATAGGGAATGAATTGGGTAATGCAGTGAAGGCGGTGAAATGGGGAACTGATTTTCTGTTGAAAGCTACGGCGAGAGATGGAGTGATATATGTACAAGTTGGTGATGCGTTTTCAGATCACAGTTGTTGGGAGAGACCAGAAGATATGGATACATTAAGAACTGTTTATAAAATTGATGCGAATAATCCCGGTTCCGATGTCGCCGGTGAAATCGCTGCTGCATTAGCTGCTGCATCCATTGTTTTCCGTTCACTGGATTCTTCCTACTCAAATCTACTGCTTGATCGCGCTGTTAAAGTTTTCGATTTTGCCAATAGACATAGAGGTGCATACAGCTCCAGCCTACACTCTGCTGTTTGCCCTTTCTATTGTGACTTTAATGGTTATCAGGATGAATTGCTTTGGGGTGCAGCATGGTTACATAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAAAATGAAGTAATTTTAAGAGCAGGAGATACAATTAATGAATTTGGTTGGGACAACAAACATGCTGGTATTAATGTCCTTATTTCCAAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAATCATTTCAAGTAAATGCAGATGCATTCATTTGTTCAATATTACCTGGAATTTCTCATCCCCAAGTCCAATATTCTCCAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCATGTGACATCTTTGTCCTTCTTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCATGTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGTCAGGTGGATTATATTCTGGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGTCCACATTACCCACAAAGGATTCACCATAGGGGTAGCTCTGTGCCATCTGTGGCCACACATTCAGCACGTATTGGTTGCAAAGAGGGATCTCGATACTTTTTTTCACCAAACCCAAACCCAAATCGATTAATTGGTGCTGTTGTTGGAGGGCCAAATTTAACAGACTCGTTCCCAGACGCCAGACCCTATTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTAGTGGGCCTATTGGCTTACTTTGCAGCCCATTCTAATTGATATAAACATGTGTAAAGAGAGAATGTAGTGGTGTGCAAAGGCCACCCTCTCTATTATTGTGTTGTTGTTGTCTAATAGGACTAATGTTGTTGTTTTTTAATCCCACTATATATATATATATTATATTAATACAAAAAAAGAATATCTTATCCCATCTTTTGTCTAAGAAAAAGAAAGATATCTAATGAACAAGGGATTTGTACTTTTGAAATTGTAGTGGAAGTTGTTTTTATCTTATTATACATGAAAATTGTTTTGAATA
Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc09g010210.2.1 Endoglucanase 1 (AHRD V1 ***- B6TRZ3_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9
MAPKYTSIIFLFLLFNSFSCSFGGGHDYHDALRKSILFYEGQRSGKLPPDQRIKWRRDSALHDGASAGVDLTGGYYDAGDNVKFVFPMAFTTTLLSWSIIDFKRNIGNELGNAVKAVKWGTDFLLKATARDGVIYVQVGDAFSDHSCWERPEDMDTLRTVYKIDANNPGSDVAGEIAAALAAASIVFRSLDSSYSNLLLDRAVKVFDFANRHRGAYSSSLHSAVCPFYCDFNGYQDELLWGAAWLHKATRRRQYREYIVKNEVILRAGDTINEFGWDNKHAGINVLISKEVLMGKAPDLKSFQVNADAFICSILPGISHPQVQYSPGGLIVKPGVCNMQHVTSLSFLLLTYSNYLSHANHVVPCGSMTATPALLKHIAKRQVDYILGDNPQRMSYMVGYGPHYPQRIHHRGSSVPSVATHSARIGCKEGSRYFFSPNPNPNRLIGAVVGGPNLTDSFPDARPYFQESEPTTYVNAPLVGLLAYFAAHSN*
MAPKYTSIIFLFLLFNSFSCSFGGGHDYHDALRKSILFYEGQRSGKLPPDQRIKWRRDSALHDGASAGVDLTGGYYDAGDNVKFVFPMAFTTTLLSWSIIDFKRNIGNELGNAVKAVKWGTDFLLKATARDGVIYVQVGDAFSDHSCWERPEDMDTLRTVYKIDANNPGSDVAGEIAAALAAASIVFRSLDSSYSNLLLDRAVKVFDFANRHRGAYSSSLHSAVCPFYCDFNGYQDELLWGAAWLHKATRRRQYREYIVKNEVILRAGDTINEFGWDNKHAGINVLISKEVLMGKAPDLKSFQVNADAFICSILPGISHPQVQYSPGGLIVKPGVCNMQHVTSLSFLLLTYSNYLSHANHVVPCGSMTATPALLKHIAKRQVDYILGDNPQRMSYMVGYGPHYPQRIHHRGSSVPSVATHSARIGCKEGSRYFFSPNPNPNRLIGAVVGGPNLTDSFPDARPYFQESEPTTYVNAPLVGLLAYFAAHSN*
Gene model matches
Gene model matches
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SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
[loading...]
GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
| Other genome matches | None |
Literature annotations [2]
Literature annotations [2]
| [Associate publication] [Matching publications] |
Two divergent endo-beta-1,4-glucanase genes exhibit overlapping expression in ripening fruit and abscising flowers.
The Plant cell (1994)
Show / hide abstract
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Two structurally divergent endo-beta-1,4-glucanase (EGase) cDNAs were cloned from tomato. Although both cDNAs (Cel1 and Cel2) encode potentially glycosylated, basic proteins of 51 to 53 kD and possess multiple amino acid domains conserved in both plant and microbial EGases, Cel1 and Cel2 exhibit only 50% amino acid identity at the overall sequence level. Amino acid sequence comparisons to other plant EGases indicate that tomato Cel1 is most similar to bean abscission zone EGase (68%), whereas Cel2 exhibits greatest sequence identity to avocado fruit EGase (57%). Sequence comparisons suggest the presence of at least two structurally divergent EGase families in plants. Unlike ripening avocado fruit and bean abscission zones in which a single EGase mRNA predominates, EGase expression in tomato reflects the overlapping accumulation of both Cel1 and Cel2 transcripts in ripening fruit and in plant organs undergoing cell separation. Cel1 mRNA contributes significantly to total EGase mRNA accumulation within plant organs undergoing cell separation (abscission zones and mature anthers), whereas Cel2 mRNA is most abundant in ripening fruit. The overlapping expression of divergent EGase genes within a single species may suggest that multiple activities are required for the cooperative disassembly of cell wall components during fruit ripening, floral abscission, and anther dehiscence.
Lashbrook, CC. Gonzalez, Bosch. Bennett, AB.
The Plant cell.
1994.
6(10).
1485-93.
Antisense suppression of tomato endo-1,4-beta-glucanase Cel2 mRNA accumulation increases the force required to break fruit abscission zones but does not affect fruit softening.
Plant molecular biology (1999)
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Plants of tomato (Lycopersicon esculentum Mill. cv. T5) were transformed with an antisense endo-1,4-beta-glucanase (cellulase, EC 3.2.1.4) Cel2 transgene under the control of the constitutive cauliflower mosaic virus 35S promoter in order to suppress mRNA accumulation of Cel2. In two independent transgenic lines, Cel2 mRNA abundance was reduced by >95% in ripe fruit pericarp and ca. 80% in fruit abscission zones relative to non-transgenic controls. In both transgenic lines the softening of antisense Cel2 fruit pericarp measured using stress-relaxation analysis was indistinguishable from control fruit. No differences in ethylene evolution were observed between fruit of control and antisense Cel2 genotypes. However, in fruit abscission zones the suppression of Cel2 mRNA accumulation caused a significant (P<0.001) increase in the force required to cause breakage of the abscission zone at 4 days post breaker, an increase of 27% in one transgenic line and of 46% in the other transgenic line. Thus the Cel2 gene product contributes to cell wall disassembly occurring in cell separation during fruit abscission, but its role, if any, in softening or textural changes occurring in fruit pericarp during ripening was not revealed by suppression of Cel2 gene expression.
Brummell, D. Hall, B. Bennett, A.
Plant molecular biology.
1999.
40(4).
615-22.
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