Clone Read SL_MboI0058A15_SP6_160913

Sequence Read 
Read Class
BAC ends
Read ID
SL_MboI0058A15_SP6_160913
Primer
SP6
ID from Seq. Facility
SL_MboI_58_A15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
540 trimmed for vector and quality, 933 raw
Genbank Accession
CZ975926
Sequence
>SL_MboI0058A15_SP6_160913 (raw untrimmed)
CCTAGTGGCTGCGGTCACTCTGAGGATACTCCCCCCTATTGTTGGACATGATTGATCATAAAGACACTGTGATTAAGTAGTTTAAGTTTCTCAATTATTG
GACTGAGAATGACACATTCCTACATACTGTTGAAAATTGTTGGAATAAGAAAGTTACTGGTAACCCCATGTGGATCTTACATACAAAACTAAAAAGGTTA
ACTAAGACTTTAAGAGAGTGGTCTAAGAAGGAATATGGGGATGTTTTTGAAAAAGTAAAGTTTTATGAAGAGAATGTTAAAATTGCAGAAGGAAATTATA
TTAGAGATAGTAGTAGGGATAATAGAGAACAACTCTATGCTCTTAATGCTCAATACATTAAATATTTGAAAATAGAACATGCCATTCTTCAACAAAAAAC
TCATCTTCATTGGCTTAAAGAAGGTGATGCAAACTCCAAATATTTCCATGCTGTTATTAGAGGAAAGAGGAGGAAAATGGTAATTCACAAATTATTAAAT
GATAATGGTAATTGGATTCAAGGGGATGAAGATATTGCTAGAGAGGCCTGTAATTATTACCAAAATATTTTTTCAGGAAAATCTGTTTAAATTTATGAAG
ATCAATTACATTGTATTCCTAAAATGGTCATTAAGTGAACAAATCATTGATCTGGAAAGAATGTCTTAATACTTGATTGTAACTTATCATTCTTATTTAT
TGAATTTTAACTTTCTTTTTCTCACTCTGGAATCAAATTGTTTTTTTTATTCCAATATCATATTTTTGTTTTCTTTTTTCATCTTTATTATCATATAATA
TCTTTTCATTTCTTTTTTTTCTACTTCTTATTACTTTTATTGTTTTTTTCCCTCATTTTTATTTATTTTACATTCATATTCTATTTCTCTTTTTTTTTTT
TTTCTTTCTTCTATGATTATTTTCGCTTATACT
>SL_MboI0058A15_SP6_160913 (trimmed for quality and cloning vector)
ACTCCCCCCTATTGTTGGACATGATTGATCATAAAGACACTGTGATTAAGTAGTTTAAGTTTCTCAATTATTGGACTGAGAATGACACATTCCTACATAC
TGTTGAAAATTGTTGGAATAAGAAAGTTACTGGTAACCCCATGTGGATCTTACATACAAAACTAAAAAGGTTAACTAAGACTTTAAGAGAGTGGTCTAAG
AAGGAATATGGGGATGTTTTTGAAAAAGTAAAGTTTTATGAAGAGAATGTTAAAATTGCAGAAGGAAATTATATTAGAGATAGTAGTAGGGATAATAGAG
AACAACTCTATGCTCTTAATGCTCAATACATTAAATATTTGAAAATAGAACATGCCATTCTTCAACAAAAAACTCATCTTCATTGGCTTAAAGAAGGTGA
TGCAAACTCCAAATATTTCCATGCTGTTATTAGAGGAAAGAGGAGGAAAATGGTAATTCACAAATTATTAAATGATAATGGTAATTGGATTCAAGGGGAT
GAAGATATTGCTAGAGAGGCCTGTAATTATTACCAAAATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924257
Expected error %
0.154877
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_MboI0058A15
Clone
Clone name
slm-58a15
SL_MboI0058A15
C01SLm0058A15
Clone type
BAC
Contamination
none
Estimated length
116,388
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pECBAC1
Accession
Heinz 1706
Restriction enzyme
MboI

Other Reads:
1 sequencing reads found