Clone Read SL_MboI0017I08_SP6_214659

Sequence Read 
Read Class
BAC ends
Read ID
SL_MboI0017I08_SP6_214659
Primer
SP6
ID from Seq. Facility
SL_MboI_17_I08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 889 raw
Sequence
>SL_MboI0017I08_SP6_214659 (raw untrimmed)
NNAACAGTCGCNGCGGTCACTCTGAGGATCATGAACCTTGAATTCTATACAATTTTCTAGAAAGTTAATATCAATGTCAAAAAAGTCAAGAGTCAAGTCC
ATCAGTTAAGAAGAAAGTCAAAGCAAAGTACTTTCATGTTTCAAGAGTCTTTACCAACGTTTTAACTTTGTTTTTCAGACTCAATATTCAAGTTTAGTAA
CCAGTAATTAGTTATGTTCATTTCTCAAATGTTATATGGGAACTAAGTATTCCCTAAGAGTTCATAATTTTTTCACATTTGAACAAGAAAGGGAACATCG
ATTCCAAGAGAGATTTTAAACTAAATGTTGAGTAATTATCTCAACCTAGAGAAGAAGTTGTTTTAAAAAAATATGAGCTAAGTATATTTGTGACAGTAGT
ATTGAGCACCATATGGGGATGCGAGCTAATATTAACTCATGTTTTTATGAACCATGTAGCTATCATGGGTATTAAAGGGCCATATTTTTAGATGATCACT
TAATTTTATCTAGATATCCACTAAGTTATGTAGTTTCATGCAACGACAAATTATACGAGAGTTCTAGCAGCATGGCAATATTTTCTATACCACTTAGGCT
CATAGTGGTGGTTGTCGATTACATTCAACAGAAACTAGTTACTTCATTACATAAGTAAAGGTTGAGTTTGTTATTGAACTTTTTAAACTAACTATGTATT
TTCCCTGTAAAACAACATTTATATATATGTGCAGCGTCTTAATGCCTTTATATTGATTAAAGTACTTCATGGATTTAATAAATAACAAAGAATTAGGGTT
CCCCTCTACATCCCTTTTCAACCTTAAACTTGAGGTTTTAACCATTCAAAACTTCTTTATCTCTATCTTCTTTTGGGTTACATATGTCC
>SL_MboI0017I08_SP6_214659 (trimmed for quality and cloning vector)
GGATCATGAACCTTGAATTCTATACAATTTTCTAGAAAGTTAATATCAATGTCAAAAAAGTCAAGAGTCAAGTCCATCAGTTAAGAAGAAAGTCAAAGCA
AAGTACTTTCATGTTTCAAGAGTCTTTACCAACGTTTTAACTTTGTTTTTCAGACTCAATATTCAAGTTTAGTAACCAGTAATTAGTTATGTTCATTTCT
CAAATGTTATATGGGAACTAAGTATTCCCTAAGAGTTCATAATTTTTTCACATTTGAACAAGAAAGGGAACATCGATTCCAAGAGAGATTTTAAACTAAA
TGTTGAGTAATTATCTCAACCTAGAGAAGAAGTTGTTTTAAAAAAATATGAGCTAAGTATATTTGTGACAGTAGTATTGAGCACCATATGGGGATGCGAG
CTAATATTAACTCATGTTTTTATGAACCATGTAGCTATCATGGGTATTAAAGGGCCATATTTTTAGATGATCACTTAATTTTATCTAGATATCCACTAAG
TTATGTAGTTTCATGCAACGACAAATTATACGAGAGTTCTAGCAGCATGGCAATATTTTCTATACCACTTAGGCTCATAGTGGTGGTTGTCGATTACATT
CAACAGAAACTAGTTACTTCATTAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.93261
Expected error %
0.18645
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_MboI0017I08
Clone
Clone name
slm-17i8
SL_MboI0017I08
C01SLm0017I08
Clone type
BAC
Contamination
none
Estimated length
116,742
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
MboI

Other Reads:
1 sequencing reads found