Clone Read SL_MboI0025F20_T7_217088

Sequence Read 
Read Class
BAC ends
Read ID
SL_MboI0025F20_T7_217088
Primer
T7
ID from Seq. Facility
SL_MboI_25_F20-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
619 trimmed for vector and quality, 864 raw
Sequence
>SL_MboI0025F20_T7_217088 (raw untrimmed)
TACCGACGGGGATATCATTGGTCTAGTGAAGATAACCACTAAGTGATGTAAGTACTTATCAAAGACTTGTAGGAAAGCTTATGCATGCTACTATCACCAG
ACCTGATATTTGCTATGCTGTTCAGACTTTAAGTCTATTTATGCAGACTCCTAAAGAGTCTCATTATGAAGATGTAACTAGAGTGGTCAGGTATCTCAAA
AGTACTATAGAGCAAGGTGTATGCCTTCAAGCTAAGGCTGCAGATACACTTACTTGCCGATGTGATTCAGATTGGGCAGCCTGTCCTAATACAAGAAGGT
CGGTTACTGGCTACATTATCAAATTTGGTGACTCTTTGATTTCGTGGAAATCAAAGAAACAAGACACTGTGTCAAGGAGTTCTATTGAGGCGGAATACAT
AAGTATGGCTTCAGTTGTAGCTGAAGTTACTTGGTTACTTGGTTTGTTCAAAAAGTTAAAGGTGCCTCTAAAGTTACCTGTTTCCATTTTCAGTAATAGC
AAATCTGCTATACAAATTGCAGCTAATCCGATATTTCATGAACGTACTAAACATACAGAGATTGACTATCATTTCATCAGAGAAAAAATTAAAGCTGGCG
TGATTCATACACGTAGGACAATTAATTAGTAATTCCACGTGAACCATGTGAATTAGTTAGTTAGTACACGTAAGAATAATTATTTATTTACAAAATTTTG
TTGAGTAGTTAGAGTGGGGTAAAAGATTCCATGTGCCCTCTAATGTATAGAAGTGGATTATGTTCCAATTTCTTTCGGCCTCCTTTTTTGAATGAAAAAA
TCAAATCCAGATTTTATGGGCTTTTATCCCCCGGCCAAAGGGGAACCTCCTTTTAATGGGAGTC
>SL_MboI0025F20_T7_217088 (trimmed for quality and cloning vector)
AACCACTAAGTGATGTAAGTACTTATCAAAGACTTGTAGGAAAGCTTATGCATGCTACTATCACCAGACCTGATATTTGCTATGCTGTTCAGACTTTAAG
TCTATTTATGCAGACTCCTAAAGAGTCTCATTATGAAGATGTAACTAGAGTGGTCAGGTATCTCAAAAGTACTATAGAGCAAGGTGTATGCCTTCAAGCT
AAGGCTGCAGATACACTTACTTGCCGATGTGATTCAGATTGGGCAGCCTGTCCTAATACAAGAAGGTCGGTTACTGGCTACATTATCAAATTTGGTGACT
CTTTGATTTCGTGGAAATCAAAGAAACAAGACACTGTGTCAAGGAGTTCTATTGAGGCGGAATACATAAGTATGGCTTCAGTTGTAGCTGAAGTTACTTG
GTTACTTGGTTTGTTCAAAAAGTTAAAGGTGCCTCTAAAGTTACCTGTTTCCATTTTCAGTAATAGCAAATCTGCTATACAAATTGCAGCTAATCCGATA
TTTCATGAACGTACTAAACATACAGAGATTGACTATCATTTCATCAGAGAAAAAATTAAAGCTGGCGTGATTCATACACGTAGGACAATTAATTAGTAAT
TCCACGTGAACCATGTGAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967045
Expected error %
0.052601
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At4g23160.1 Score 149 E Value 2e-36 Identity 13.60% Align. Length 542bp (87.56%) Frame 1
68417.m03342 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU89728.1| Score 218 E Value 9e-56 Identity 18.50% Align. Length 566bp (91.44%) Frame 1
putative retroelement pol polyprotein-like [Solanum tuberosum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAB10743.1| Score 196 E Value 3e-49 Identity 16.90% Align. Length 572bp (92.41%) Frame 1
retroelement pol polyprotein-like [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone SL_MboI0025F20
Clone
Clone name
slm-25f20
SL_MboI0025F20
C08SLm0025F20
Clone type
BAC
Contamination
none
Estimated length
73,414
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pECBAC1
Accession
Heinz 1706
Restriction enzyme
MboI

Other Reads:
1 sequencing reads found