Clone Read SL_EcoRI0048H15_SP6_247588

Sequence Read 
Read Class
BAC ends
Read ID
SL_EcoRI0048H15_SP6_247588
Primer
SP6
ID from Seq. Facility
SL_EcoRI_048_H15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
527 trimmed for vector and quality, 983 raw
Genbank Accession
CZ952602
Sequence
>SL_EcoRI0048H15_SP6_247588 (raw untrimmed)
AGTCTATTATAGGGGAGAAAGGANGAAGCTCATTTCTTCAAGACTTTTCTACACACATGATCTACTAAAAATGGTGATATCAATGTGCAACTTATTTGTT
CAAGTGACAATATTGATCGATTCATTTACAAATCTCTATCAAGTACAACTTTTGAGAAGATGGTGAACTTGGGATGAGAAGATTCAAGTCTTCAGATTAA
TGTTCACGTTAGGGGGTGTTAATACGAGACATACTTTTGGTTTTGTCTCACTGAATTTTCCTTGTAAGATTCTTAATAAGGTGTTCATAATGCATGCTAT
TAGATATTTGTACTCTTTTTTCAAAGAATTTTCGAGAAATTACGTAAATGAACCATAAAATCCAAAATAATAAGGGAAAGTTAAGTAAATATACAATATG
TAGAAAATATTTGTCATTTATAAAACAATAACATATTTTTAACTTGATCACTTTTAATACATTTAATGAATATTACAGAAAATAATTTATAAAACACATA
TAATACAAGTTGTATTGATATATAATGCATTTATCACACGTTTTTATACAATATGTCAATTTCTTACTTAACAAGTATAATATATTTTAAACTGTGGTAA
TACCTTATATATTGCATACTTAATTACTTTTTAATACATTGCATATTTATGGGATTGTTATGTATTTCTTTAAAATATAATTAATTATTCCCTAAAATCA
ATAATTTTTTATTACAAGGGGGGCTAACCAATAAATTTTTTAATAAGTTTCCTGGTTTATTCCCCTATCCAAAGTAATTTCAGAAATTACCTTTTTCCCG
AAAAAAATTTTCGGCCCCTACCCCCCTTTTTTTTTGGGAAATTATCCAAAAAAACCCCACTTCTAATTATTTAATTTCATAAATTCCCCTTGGAGGTTTT
AACTTCCCAAACCCCTTTTTTTTTTCCCCACGGTACCCTATTAATTTTTCCTCCATAAATTAAGAGGGCTTTTTCCCCTTCCC
>SL_EcoRI0048H15_SP6_247588 (trimmed for quality and cloning vector)
GAGAAAGGANGAAGCTCATTTCTTCAAGACTTTTCTACACACATGATCTACTAAAAATGGTGATATCAATGTGCAACTTATTTGTTCAAGTGACAATATT
GATCGATTCATTTACAAATCTCTATCAAGTACAACTTTTGAGAAGATGGTGAACTTGGGATGAGAAGATTCAAGTCTTCAGATTAATGTTCACGTTAGGG
GGTGTTAATACGAGACATACTTTTGGTTTTGTCTCACTGAATTTTCCTTGTAAGATTCTTAATAAGGTGTTCATAATGCATGCTATTAGATATTTGTACT
CTTTTTTCAAAGAATTTTCGAGAAATTACGTAAATGAACCATAAAATCCAAAATAATAAGGGAAAGTTAAGTAAATATACAATATGTAGAAAATATTTGT
CATTTATAAAACAATAACATATTTTTAACTTGATCACTTTTAATACATTTAATGAATATTACAGAAAATAATTTATAAAACACATATAATACAAGTTGTA
TTGATATATAATGCATTTATCACACGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.918442
Expected error %
0.580539
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_EcoRI0048H15
Clone
Clone name
sle-48h15
SL_EcoRI0048H15
C01SLe0048H15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato EcoRI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pIndigoBAC-5
Accession
Heinz 1706
Restriction enzyme
EcoRI

Other Reads:
1 sequencing reads found