Clone Read SL_EcoRI0052H13_SP6_250278

Sequence Read 
Read Class
BAC ends
Read ID
SL_EcoRI0052H13_SP6_250278
Primer
SP6
ID from Seq. Facility
SL_EcoRI_052_H13-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
479 trimmed for vector and quality, 874 raw
Genbank Accession
CZ951473
Sequence
>SL_EcoRI0052H13_SP6_250278 (raw untrimmed)
ACTACTTTAGACCCCNGGGAANNNGGGGNNANAAANGTGAACCTTTAGAGGGTTTACATGNNCTTTCGGTTCTAAGCATCTATTCCCTTTAGAAATCATA
TTTAGTCATCACATAACTTCACAGTAGCCTTTACTAGACCATTTATGTAAACATCTTATCATAATAGCTCATAAGTGTTCATAAGTGAGAACAATCCTTT
CACTTTAGAAACACTAGCAAGTGAGTAAACCTTTCACTTTAACAATTCACTATAATCATGAGAACTACCTTTCAATCATATAACAATCATACCATAACAT
ACATTCATGCTTCATAGCTAATTGAAGTCTATAGGGGTAAGGTTGAGGGAACCTTTTCATCAACACCACAACAACACATTTAGCTATAACATTATTACTA
TCTAAGTAATTGACCTTTCATAATTGAGTTCAATAACGAACCAACATTCATACCTTTTTTCACTACATGGGAATAATACTTTAATTACCCAAAAAAATTT
AACAATTCATAACACAAGGTAATTCATGATGTAACAATATAGCTAACATCAATATAAACAATTGATATATTCCTTACCTTCAACCAATTTACCATATCAA
ATCCATAATTAATCCAATTGGGGAAGTACATGAATCCAAGGGAATTTCCTGTAAAAAACAACACATAACCCTCCTTATCTACCTAAGACCTCTAAGGAAT
CCTATTCCTCCTACCCGATTTCCCAATTTCCTTTTTGAAAAAGACCCCTGTGGTCAAAAAACTCCAAAATTTGGGGAATTTTGCAATCACCTTGAAGGGA
CCTCCTGGGGGAACTAATCCAAGAGTGGAATAACCCCTCCCCCACGGAGTGCAACCCCCAACTTTGTTGAAATC
>SL_EcoRI0052H13_SP6_250278 (trimmed for quality and cloning vector)
CTTTCGGTTCTAAGCATCTATTCCCTTTAGAAATCATATTTAGTCATCACATAACTTCACAGTAGCCTTTACTAGACCATTTATGTAAACATCTTATCAT
AATAGCTCATAAGTGTTCATAAGTGAGAACAATCCTTTCACTTTAGAAACACTAGCAAGTGAGTAAACCTTTCACTTTAACAATTCACTATAATCATGAG
AACTACCTTTCAATCATATAACAATCATACCATAACATACATTCATGCTTCATAGCTAATTGAAGTCTATAGGGGTAAGGTTGAGGGAACCTTTTCATCA
ACACCACAACAACACATTTAGCTATAACATTATTACTATCTAAGTAATTGACCTTTCATAATTGAGTTCAATAACGAACCAACATTCATACCTTTTTTCA
CTACATGGGAATAATACTTTAATTACCCAAAAAAATTTAACAATTCATAACACAAGGTAATTCATGATGTAACAATATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.919023
Expected error %
0.857225
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_EcoRI0052H13
Clone
Clone name
sle-52h13
SL_EcoRI0052H13
C01SLe0052H13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato EcoRI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pIndigoBAC-5
Accession
Heinz 1706
Restriction enzyme
EcoRI

Other Reads:
1 sequencing reads found