Clone Read SL_EcoRI0056N08_SP6_253198

Sequence Read 
Read Class
BAC ends
Read ID
SL_EcoRI0056N08_SP6_253198
Primer
SP6
ID from Seq. Facility
SL_EcoRI_056_N08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
665 trimmed for vector and quality, 1012 raw
Genbank Accession
Sequence
>SL_EcoRI0056N08_SP6_253198 (raw untrimmed)
NNNCCGTAAGCNGANGTCATCTNAGGATCCCCGGGTCCGAGCTCGAATTCCATTGCTGGATCCCCTTAAAAGGCACAGTTATGGAACTTTGACGTAAATG
TGAACTTCATATTTATGCCAAAATGGGGCATCATGGTTGTTCACTCATGGAAACCCTATTTATGCCTATTGAGACATTGTGGTTATCCACCTCATGAGAT
TTATGGTAGACCTTCCTTTCCAGATTGGTAAGGGGCACACACTCATATTTAATTTCACTCGGTGCTAAGCTAAGTTCCCTTTATAAAAAGACTTCATTAA
CAGTAATTTATAAAATATAGGCTTAGGAGAATCATCCCCTCATATGCTTAGCTCATAGGTCATAAATGAAAGTTCATCAACCTAAATCATGTGAGAAATC
CTTTCACATGGACATAGCATATGTATTAGCACTATCTAGCTTAGGATACACTTGAGCACGTCTTACAAGTATCCTCTATAGACTAGATCATCATTCATGC
ATGTGTGTACACATATATATGAGCAAACCTTTCACATAAAATAACGTCACACATGTTCATATATCAATGCATAAGTCTATGTGTATCTATATGAGCAATC
CTTTCATATCAACACTCCAAGAAACTATGCACATTCACACTTCATCAAATCATATACTTAACATCATAGCGTATAAGTCAAATTCATAACATGTTCATAC
AATCCTATGCATGTCCTTAGAAGACCAACTTAGGAACTATTCCACCAAGGTGCACATTGTGCATACATAGTCAAAGCTCCATACCCCTGCCTATTCTAGT
ACATCTAACATGTTATATTATTGAATGATGCATCCCCCCACATTCTTAAAAGGTTAACATTACCTAAAATTTTTTTTTTAAGACTACAACCTTCCTACTG
GAAACATTAGCCTTTAGGAATTAACCTATATTTAAACAAAGGAAAGCATTATAATACCCCCTCATAGGCAGCAAGTACATTAACCCTTAACATAGCCTTG
GCCAAAAAATAA
>SL_EcoRI0056N08_SP6_253198 (trimmed for quality and cloning vector)
TCCCCGGGTCCGAGCTCGAATTCCATTGCTGGATCCCCTTAAAAGGCACAGTTATGGAACTTTGACGTAAATGTGAACTTCATATTTATGCCAAAATGGG
GCATCATGGTTGTTCACTCATGGAAACCCTATTTATGCCTATTGAGACATTGTGGTTATCCACCTCATGAGATTTATGGTAGACCTTCCTTTCCAGATTG
GTAAGGGGCACACACTCATATTTAATTTCACTCGGTGCTAAGCTAAGTTCCCTTTATAAAAAGACTTCATTAACAGTAATTTATAAAATATAGGCTTAGG
AGAATCATCCCCTCATATGCTTAGCTCATAGGTCATAAATGAAAGTTCATCAACCTAAATCATGTGAGAAATCCTTTCACATGGACATAGCATATGTATT
AGCACTATCTAGCTTAGGATACACTTGAGCACGTCTTACAAGTATCCTCTATAGACTAGATCATCATTCATGCATGTGTGTACACATATATATGAGCAAA
CCTTTCACATAAAATAACGTCACACATGTTCATATATCAATGCATAAGTCTATGTGTATCTATATGAGCAATCCTTTCATATCAACACTCCAAGAAACTA
TGCACATTCACACTTCATCAAATCATATACTTAACATCATAGCGTATAAGTCAAATTCATAACAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948642
Expected error %
0.546392
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_EcoRI0056N08
Clone
Clone name
sle-56n8
SL_EcoRI0056N08
C01SLe0056N08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato EcoRI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
EcoRI

Other Reads:
1 sequencing reads found