Clone Read SL_MboI0036P21_T7_268922

Sequence Read 
Read Class
BAC ends
Read ID
SL_MboI0036P21_T7_268922
Primer
T7
ID from Seq. Facility
SL_MboI_36_P21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
424 trimmed for vector and quality, 976 raw
Genbank Accession
DU003194
Sequence
>SL_MboI0036P21_T7_268922 (raw untrimmed)
CGGGGTCTTTACGGCACTTCACCCACCTCAACCAACTTATCGGATATCTACACCTCCTACCATAAAGAGCCTCAATAAAGTCATACCCATACTCGAGTGA
TAACTATTGTTATAGTAAATTTCAATGAATGACAAATGTTCATCCAAATTACCCTTAAAATCAATCACACAAGCTCTCAACATATTTTCTAAAGTATGGA
TTGTATGATCCACTTGCCCATCTATTTGAGGATGAAAAATCATGCTAAGCTTAACACGAGTACCAAGACCCTTTTGTAAAGACTTTCAAAACTGAGATGT
CAATTAAGTACCATAATCTGAAATAATGGATAAGGCCACTCCATGCATTCTTAGCATATCCCTCAAATACAACTTAGCATAATTCTCTGCCAAATAGAAA
ACTCTGAAGGGAATAAAATGAGCCGATTTCGTGATTTTATCTACTGCAACACAAATCAAGTCATGTTGTCATGGAGTGATTCACGTACTATGACACTTCA
TCCTATTCCTAATCGCCCACGATCGTTAGTTTATAATATAACTCAACTTCAATAAGTTAGGGTTTGAATTTCATATGAAGTGGTTACGTATTCAGCAATC
AATTTATTAATTACCAATAATGCTCAATCTTATCTCCATGGAAATAAATTTTTCCTAATAAAAATCTTTATTGCTATTTAAGGGCTAACACTAATTCTAT
AAATATAAGAATGGGGTTTTTTATTTTTAAACATTTCAAACTGCCTCTTTTATTATCCTTCCAATAATATAAACTTATATCTATATGCACTTAATTGAGA
ATGTCTCTCATCATTAATATTGCATATCATATAACTATATAATTTACATAGCTCAATTTCTCTGTATAAATTATCTCTTATTTTAGATATTTAATTTATT
ATATCTTAATCTACTGTTAAAACTTTTATCTATAAAACTTACTTTCTCCCCATTACTAATACTCTAATCATTATTG
>SL_MboI0036P21_T7_268922 (trimmed for quality and cloning vector)
ACTTCACCCACCTCAACCAACTTATCGGATATCTACACCTCCTACCATAAAGAGCCTCAATAAAGTCATACCCATACTCGAGTGATAACTATTGTTATAG
TAAATTTCAATGAATGACAAATGTTCATCCAAATTACCCTTAAAATCAATCACACAAGCTCTCAACATATTTTCTAAAGTATGGATTGTATGATCCACTT
GCCCATCTATTTGAGGATGAAAAATCATGCTAAGCTTAACACGAGTACCAAGACCCTTTTGTAAAGACTTTCAAAACTGAGATGTCAATTAAGTACCATA
ATCTGAAATAATGGATAAGGCCACTCCATGCATTCTTAGCATATCCCTCAAATACAACTTAGCATAATTCTCTGCCAAATAGAAAACTCTGAAGGGAATA
AAATGAGCCGATTTCGTGATTTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944009
Expected error %
0.110109
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT39297.1| Score 158 E Value 3e-40 Identity 62.20% Align. Length 406bp (95.75%) Frame 3
putative gag-pol protein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38744.1| Score 158 E Value 5e-41 Identity 63.00% Align. Length 406bp (95.75%) Frame 3
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone SL_MboI0036P21
Clone
Clone name
slm-36p21
SL_MboI0036P21
C01SLm0036P21
Clone type
BAC
Contamination
none
Estimated length
123,826
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pECBAC1
Accession
Heinz 1706
Restriction enzyme
MboI

Other Reads:
1 sequencing reads found