Clone Read SL_MboI0047D05_SP6_285008

Sequence Read 
Read Class
BAC ends
Read ID
SL_MboI0047D05_SP6_285008
Primer
SP6
ID from Seq. Facility
SL_MboI_47_D05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
524 trimmed for vector and quality, 972 raw
Genbank Accession
DU006049
Sequence
>SL_MboI0047D05_SP6_285008 (raw untrimmed)
CAATTGCTGCAGTCACTCTGAGGATCCCAGGTGCTCTAGTTGATTCTATGATTATTTTGCATTATTCTTGTTTGGTCACTTTGTGTAAGTGTTAACTTGG
GAAATATTTTAATGAGACGATCTCAATTGGCTGTTTAGTCAATATTGTTGAGTGTAGAATATCAATTTTTGAGCATCGTTGGTTTGCAATCAAAGAATTC
TAAGAGAATCCTGAGCCCCCACCAATGTATTTTATTAACCTTAAAATGAAGTTGATGTAGTCTTTGTTGGTGCATCGTGCAATGTACTATGCTTTCTTGG
ACCAGGTCGCCTATACACTTGGACAAAAATTATAGGCAGTTGTAAATATGACTATATCATTGGCTATACCAATATCTCAGCCATAATCTTGAATTCTTAT
AAGATTATTTTAACGCTTCAACATAAGCAATAAGCTTTACATGACCTTAAAATAACATCTTAAACGTTGGTACATCATAACACCATTTTGGATTACTTTG
ATGTTTGTTTTAAGGCATCACATATAGAATTTATGAAAGAATTAAAAAAAAAAAGTAAAATTGATTATTAATCTTTCTACAACAAAACCCCCCAGAATTA
AAGATTTGAGCTCTAAAACACTCACAAAAGAGAGGAGTTGTACCACCCTTAGGTCGTAAAATGAATATCCTGAACTTTGAACCAGGTGGAAAATGATGAA
AATTTTAACCACTTTTCCATTGAAAAAAAGGCAATTGGGAAAAACTCCCCCTAAAGGGGCCCCTACAATTGGCAATTTCAAATTAATTAAATCTCCAAAT
TTGGGCCACCAAAAACTTGGGGGAAAAAACCCAAAAATACACTATAAGCGAGGCAAAAAACATCCTGGAAAAAAAAAGAAATTTCTCCCATAAAACAAAA
ACCCACAGGGTTCCTCCAAATTGCCTGTCGGAAAAATTATCAAAGATACTAACCTAAATCCATCATAATAAC
>SL_MboI0047D05_SP6_285008 (trimmed for quality and cloning vector)
AGGTGCTCTAGTTGATTCTATGATTATTTTGCATTATTCTTGTTTGGTCACTTTGTGTAAGTGTTAACTTGGGAAATATTTTAATGAGACGATCTCAATT
GGCTGTTTAGTCAATATTGTTGAGTGTAGAATATCAATTTTTGAGCATCGTTGGTTTGCAATCAAAGAATTCTAAGAGAATCCTGAGCCCCCACCAATGT
ATTTTATTAACCTTAAAATGAAGTTGATGTAGTCTTTGTTGGTGCATCGTGCAATGTACTATGCTTTCTTGGACCAGGTCGCCTATACACTTGGACAAAA
ATTATAGGCAGTTGTAAATATGACTATATCATTGGCTATACCAATATCTCAGCCATAATCTTGAATTCTTATAAGATTATTTTAACGCTTCAACATAAGC
AATAAGCTTTACATGACCTTAAAATAACATCTTAAACGTTGGTACATCATAACACCATTTTGGATTACTTTGATGTTTGTTTTAAGGCATCACATATAGA
ATTTATGAAAGAATTAAAAAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.939619
Expected error %
0.206361
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_MboI0047D05
Clone
Clone name
slm-47d5
SL_MboI0047D05
C01SLm0047D05
Clone type
BAC
Contamination
none
Estimated length
88,853
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pECBAC1
Accession
Heinz 1706
Restriction enzyme
MboI

Other Reads:
1 sequencing reads found