SGN Marker TG301
SGN-M109
Synonyms |
Locus associations |
RFLP details |
Insert size
750
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG301 image not available
|
Forward sequence
TTGTAACTTACTAAATTAAGAGCTCAGGATGAACAGAACACGAATTATTAGTTCATATTAAGCAAGAAACTTAAAAAACTTCACCTTCTC
CAACATACTCTACAACAAACTCTTTTGTCTTGATATCTTCATCTGCCACAATCCCAGTGCCACATTTCTCAGTCTGCACGTTATGAGTCA ACAAAACTTTAGTTTTTTAGATGATTATTGCTTGGTTTTCAAAAGAAACGAAAATAAGAAGAATACAAAATAACCAACATTTCTTTACTT CTTCACCAGATACACAACTGAATTAAATGCAAAAATAGATATGAAAAATGTTACCAGCCTGCACTTTTGATGCAGATTGTACTTGTTTGC AATTGAAAAGTGTCGAATGGTCATTTTTGGTAAAAACTGATGAATGTGGTATTTTGAGAAAGGATTTATGACGGTCCTTTTGCTTAATTA TCCCTCTTATAAACGTTAGTAAAGGC |
Reverse sequence
TATTCTGAATCTGGAAAATTGTTCTGCCAATTTCTTTGACCAACCAGACAATACCCTTTTAATCTAAGACCCTAATTACAAGGTTACTGA
CAATCACTTTTGACACCAATGTCTTTGATAAAGCACTGTTAAAATTTTCAGATGTGCTTTAATACTCTGCATCCTTTTTAGGAACTCTTT TGTCTACTTTCACTTTTTAAAAGAAAGAACTTAAGGAGAGGACATACTTATTATTTTTGCATTTTCTATATCAAGTAAAGTGAGAAGACT TCCATTAATTTGCATCCAGCGGATGCTAATGGCTACAACATAGCTACTTTAAGCAAATAGGTGATTTGATCAAGATTCTTTACGTTTTCA AGATCACAGCAACAAAAAGGGTTCCTTAAAAACCTAGCCTTTACTAACGTTTATAAGAGGGATAATTAAGCAAAAGGACCGTCATAAATC CTTTCTCAAAATACCACATTCATCAGTTTTTACCA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U150014 | 3.2e-39 | 81 (17.0% of RFLP seq) | + |
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| ![]() Tomato-EXPIMP 2009 |
| ![]() Potato meta-QTL consensus map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
| ![]() Tomato-EXPIMP 2001 |
Other PCR data |
|
Overgo hybridization and physical mapping |
TG301 was used as an overgo probe on plate 3 [well A7]
Plausible BAC Matches: P124N23, P165H20, P034F21
Overgo Sequences
A sequence
ATCCCAGTGCCACATTTCTCAGTC
|
B sequence
TGACTCATAACGTGCAGACTGAGA
|
AB sequence
ATCCCAGTGCCACATTTCTCAGTCTGCACG
|
Marker sequence
TTGTAACTTACTAAATTAAGAGCTCAGGATGAACAGAACACGAATTATTA
GTTCATATTAAGCAAGAAACTTAAAAAACTTCACCTTCTCCAACATACTC TACAACAAACTCTTTTGTCTTGATATCTTCATCTGCCACAATCCCAGTGC CACATTTCTCAGTCTGCACGTTATGAGTCAACAAAACTTTAGTTTTTTAG ATGATTATTGCTTGGTTTTCAAAAGAAACGAAAATAAGAAGAATACAAAA TAACCAACATTTCTTTACTTCTTCACCAGATACACAACTGAATTAAATGC AAAAATAGATATGAAAAATGTTACCAGCCTGCACTTTTGATGCAGATTGT ACTTGTTTGCAATTGAAAAGTGTCGAATGGTCATTTTTGGTAAAAACTGA TGAATGTGGTATTTTGAGAAAGGATTTATGACGGTCCTTTTGCTTAATTA TCCCTCTTATAAACGTTAGTAAAGGC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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