SGN Marker SSR578
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 40 High: 50
Repeat motif: AAC Repeat number: 6
Repeat motif: ATC Repeat number: 5
Repeat motif: Repeat number:
Forward primer: ATTCCCAGCACAACCAGACT
Reverse primer: GTTGGTGGATGAAATTTGTG
Predicted size: 296
Derivations |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
Plausible BAC Matches: P333H17, P276B18, P089F15, P224I22, P173B24, P236I17, P190C12, P260B04, P144D21, P257A03, P252M14, P074K20, P208J23, P268I23, P120C03, P272J24, P126O23, P047A14, P262C13, P032J05, P233I23, P270L24, P222P15, P174L13, P043B24, P202N18, P270I07, P080E24, P150J13, P138D24, P128G13, P285I11, P127C13, P143H24, P109J05, P026P19, P273A01, P312P01, P125J22, P069P07, P326H01, P271A14, P261P16, P281F07, P221C23, P026C23, P109P10, P058N11, P142F07, P202M18, P042A17, P068J14, P094E11, P186E13, P237F15, P333A15, P315P12, P311O03, P268K19, P223P20, P083M16, P217P10, P080F24, P070H04, P169P10, P163P02, P079E24, P174F14, P242M07, P262N02, P037A05, P268A21, P192B10, P019G01, P042G19, P208N16, P293N05
Overgo Sequences
A sequence
CAAAACCCTCTTCCTCTTCCTCTT
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B sequence
GATGATGAGAAAGAGGAAGAGGAA
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AB sequence
CAAAACCCTCTTCCTCTTCCTCTTCCTCTT
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Marker sequence
GCACAAAGATAACATAAGTTACTAGTAAGCGCAGCGCGCTAGCGCAAAGA
AAGAGAAGAAGTATATACATGGAGCTATTCCCAGCACAACCAGACTTATC TTTACAAATAAGTCCTCCAAACAACAAATCATCATCATCATCAACAACAA CAACAACAACATGGAAGGCTATGAGTAGTAATAATAACAATATTGATAGA GATGAGATGGACTTATTCTTCTTGAGAAGAGCTTTAGAATCAAAACCTGA TAACAACAATACTCTTTTTGAGCTTTCTTTATCTAATCCTAATTATAAAC CTTCTCATCATACTCAACTAATTAACTCTTCCCATTTTCATCCCCTACAA AACACAAATTTCATCCACCAACAAAATCAACAACAACTTAATATCATGAG ACCTATAAGAGGAATTCCATTGTACAATCAAAACCCTCTTCCTCTTCCTC TTCCTCTTTCTCATCATCATAATAACTACCCAATATTTGCTCACCAAACC TTTGAAAATACTGCTCCTACAACAACACCTACATTACCTATACATTCTTC TGGATATTGTATTAGTAGTTTTAGTAACAATAGTAACAAAACTATACCTA ATTCCTCACCAACAACTATCCCTTTTCATCATTCTAATCATCAAAGTGGG CTAATGCGATCTAGA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |