SGN Marker SSR578
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 40 High: 50
Repeat motif: AAC Repeat number: 6
Repeat motif: ATC Repeat number: 5
Repeat motif: Repeat number:
Forward primer: ATTCCCAGCACAACCAGACT
Reverse primer: GTTGGTGGATGAAATTTGTG
Predicted size: 296
Derivations |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
Plausible BAC Matches: P262C13, P262N02, P268A21, P242M07, P208N16, P261P16, P026C23, P120C03, P109P10, P272J24, P138D24, P083M16, P192B10, P257A03, P186E13, P236I17, P293N05, P224I22, P252M14, P217P10, P237F15, P042G19, P150J13, P221C23, P333H17, P069P07, P311O03, P026P19, P128G13, P042A17, P202M18, P190C12, P270L24, P208J23, P143H24, P043B24, P032J05, P068J14, P281F07, P169P10, P223P20, P074K20, P125J22, P080F24, P333A15, P080E24, P163P02, P094E11, P326H01, P271A14, P285I11, P173B24, P070H04, P268K19, P202N18, P047A14, P127C13, P126O23, P037A05, P019G01, P089F15, P260B04, P312P01, P058N11, P268I23, P174F14, P079E24, P233I23, P270I07, P273A01, P222P15, P109J05, P174L13, P142F07, P144D21, P276B18, P315P12
Overgo Sequences
A sequence
CAAAACCCTCTTCCTCTTCCTCTT
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B sequence
GATGATGAGAAAGAGGAAGAGGAA
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AB sequence
CAAAACCCTCTTCCTCTTCCTCTTCCTCTT
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Marker sequence
GCACAAAGATAACATAAGTTACTAGTAAGCGCAGCGCGCTAGCGCAAAGA
AAGAGAAGAAGTATATACATGGAGCTATTCCCAGCACAACCAGACTTATC TTTACAAATAAGTCCTCCAAACAACAAATCATCATCATCATCAACAACAA CAACAACAACATGGAAGGCTATGAGTAGTAATAATAACAATATTGATAGA GATGAGATGGACTTATTCTTCTTGAGAAGAGCTTTAGAATCAAAACCTGA TAACAACAATACTCTTTTTGAGCTTTCTTTATCTAATCCTAATTATAAAC CTTCTCATCATACTCAACTAATTAACTCTTCCCATTTTCATCCCCTACAA AACACAAATTTCATCCACCAACAAAATCAACAACAACTTAATATCATGAG ACCTATAAGAGGAATTCCATTGTACAATCAAAACCCTCTTCCTCTTCCTC TTCCTCTTTCTCATCATCATAATAACTACCCAATATTTGCTCACCAAACC TTTGAAAATACTGCTCCTACAACAACACCTACATTACCTATACATTCTTC TGGATATTGTATTAGTAGTTTTAGTAACAATAGTAACAAAACTATACCTA ATTCCTCACCAACAACTATCCCTTTTCATCATTCTAATCATCAAAGTGGG CTAATGCGATCTAGA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |