SGN Marker T0292
SGN-M1397
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TOVCW86TH
Arabidopsis best BAC match: AL078637.1
Arabidopsis position: 4.1240000
Arabidopsis identities: 0.837
Best GenBank protein hit: CAB79348.1
Evalue: 3.9e-46
Identities: 0.763
Description: putative protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TOVCW86TH
Arabidopsis best BAC match: AL078637.1
Arabidopsis position: 4.1240000
Arabidopsis identities: 0.837
Best GenBank protein hit: CAB79348.1
Evalue: 3.9e-46
Identities: 0.763
Description: putative protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T0292 was used as an overgo probe on plate 8 [well C1]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GGGAAGTGTAGGTGATTCGAAAAC
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B sequence
GGGTTTCCTCTGATGAGTTTTCGA
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AB sequence
GGGAAGTGTAGGTGATTCGAAAACTCATCA
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Marker sequence
TATTGCTACCATGGGAAGTGTAGGTGATTCGAAAACTCATCAGAGGAAAC
CCAGATTTTTGTGCCTTCATGGATTTCGAACAAGTGGGAAAATTTTGAAG AAGCAAATATTTGATAAATGGCCAACTGAAGTTGTGGATAAATTAGATCT AGTTTTTGTTGATGCGCCTTTTCCATCTCAAGGAAAATCTGAAGTTGAAG GCATCTTTGACCCTCCCTATTACGAGTGGTTTCAATTCAATAAGGAATTT ACAGAGTATGAGAATTTTGATAAATGTCTTGAATACATAGAAGAATGTAT GATCAAACATGGACCTTTCGATGGTCTTCTTGGTTTCTCTCAGGGGGCAA TTCTTTCTCGAGCATTGTCGGGGTTGCAGGCTAAGGAAGTGGGACTTACA AAGGCATCAAAAATTAAATATCTGATCATAATTGGAGGTGCTAAATTTTC G |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T0292
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| User comments |
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