SGN Marker T0586
SGN-M1486
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TMEAA47THB
Arabidopsis best BAC match: AC008113.4
Arabidopsis position: 1.1330000
Arabidopsis identities: 0.764
Best GenBank protein hit: AAF26948.1
Evalue: 1.4e-66
Identities: 0.730
Description: similar to thimet oligopeptidase sp|P47788 (deleted) [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAA47THB
Arabidopsis best BAC match: AC008113.4
Arabidopsis position: 1.1330000
Arabidopsis identities: 0.764
Best GenBank protein hit: AAF26948.1
Evalue: 1.4e-66
Identities: 0.730
Description: similar to thimet oligopeptidase sp|P47788 (deleted) [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0586 was used as an overgo probe on plate 1 [well D2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CGACCTCAGATGTGATTGAGCTTC
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B sequence
AGCTTATCTGGTGTCGGAAGCTCA
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AB sequence
CGACCTCAGATGTGATTGAGCTTCCGACAC
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Marker sequence
CACCTCAAAAAATTGAGGAAGAAAACAGAAAAATAGAAAAAATGGAGGTG
GCTATGTCTTTGAATCCTCTTGTTAGATTACCTCTTTCAAATTCAAGAAC CCATGAAGAATTTTCAGTGCTAAAACATTCCGTTGTTTCGACAACAAATA GAAGAATTCAGAAGAGGAAATTGTTAGTGGTTGAAGCAAAAGGAAGAAAA GGAGGTATGGCTGCTCGTCAGTACCAACGTATGGCTCCTCCTATGCCCAA GATTGAAGATGATGGAAACCCTAAATTCGTTATTTTTATACGAATGGCTA ATGTTTACCTTTGGTACCCCCTCAATATCATAACAGGTGGCACAACTGCA AAAATTATGGTTGCTGCAAAAGACAACTTTCTTGGGAAATATATATACGA AGATACTCTAGCTAGGAATCTCGCAGCACTGATTTACAATGACGAGAAGG AAATAAAGAAATTGGCAATGAAACAGCATCGTGTATTGAAGTCTGCCACA GAATTTAGATATGGATACAAACTTGTCGAGAATAACAATTTGAGAGCTGC CCTTTCGACCTCAGATGTGATTGAGCTTCCGACACCAGATAAGCTTAAAA CAGTTGTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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