SGN Marker T0966
SGN-M1687
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 98
Tomato EST read: TMEAV47TH
Arabidopsis best BAC match: AB024036.1
Arabidopsis position: 3.0580000
Arabidopsis identities: 0.659
Best GenBank protein hit: BAB02821.1
Evalue: 7.7e-49
Identities: 0.711
Description: contains similarity to protein translation inhibitor [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAV47TH
Arabidopsis best BAC match: AB024036.1
Arabidopsis position: 3.0580000
Arabidopsis identities: 0.659
Best GenBank protein hit: BAB02821.1
Evalue: 7.7e-49
Identities: 0.711
Description: contains similarity to protein translation inhibitor [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0966 was used as an overgo probe on plate 7 [well B11]
Plausible BAC Matches: P146A18, P059P18, P184F14
Overgo Sequences
A sequence
AATTCGCGCGTTCCTTTCGTTTGC
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B sequence
TACCGGTACTGGCTAAGCAAACGA
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AB sequence
AATTCGCGCGTTCCTTTCGTTTGCTTAGCC
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Marker sequence
TGGCTGCAAACGCCGGGCACAACCGTACTCCGATGGCCATCGGAATTGGA
CGCGTGTCAGTTGCTAATTCGCGCGTTCCTTTCGTTTGCTTAGCCAGTAC CGGTAAAAAGGAGGAAATTAGTACAGATAAGGCACCAGCTGCAGTGGGCC CATATTCTCAAGGAATTAAGGCTAATAATTTCATTTATGTATCTGGTTCT CTAGGTCTTATTCCTGAGACTGGAGAACTCATATCAGACAATGTGGAGGA TCAAACAGAACAGGCTCTGAAAAATATTGGGGAGATACTTAAAGCTGGCG GTGTTAGCTATTCTGCAGCTGTTAAAACAACAATTATGTTGGCTGATCTA GGGGACTTTCAGAAAGTCAATGCAATTTATGCTAAATATTTTCCAGATCC TGCACCAGCACGTTCAACTTTTCAAGCAGCAGGATTACCTCTGAATGCAA AAATTGAAATTGATTGCATAGCAGTGTGTTAAACAGATTAAAGTCTTCAA CTTCCATGGCAGCTATGACTTTAGATTCAAAAATTAAAGTTAAATAAAGG AGATTTAAGTCTTTAATTCAGAGTCTCTTGATACTCTGCTGCAGATTCTA ATCT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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