Sol Genomics Network

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SGN Marker TG111

SGN-M182

Synonyms

None

Locus associations

None

RFLP details

Insert size

600

Vector

pUC

Cutting Site

SRD/PST1

Drug Resistance

AMP

Image

TG111 image not available

Forward sequence

GGGGGGGGGGTTCGATACACCCTTAGCTCAAGTAAAGCATTGTAAAATCAAGTAGGAAATGAAATATATTGAAGCAACAGCTGGGCATAC
ATCACCAAAACAAATTGCCAACCCGGACAAAGAATTGTGGTAATTTGGTTTTAATACGGTATTCAGGAGTAAAATTTCTGAATACGGTAT
TCGGTACAATATACTAATACCATTCGATATTCACTAGGATTCTTTTGCCCACCATTTCTTCCTAGAACACTGAACAATCACAATAGAATG
GTCGGACAAGCACCATCTAATCTGAGCCTGACTATCTCAAATCTCTAGTTTCAGATTCAATACTCTTTTATGATTTGTTTTCTTCCCTTT
TAATCTTCTTGTATAGAACTAATTTAGTTGTGGAAGAATCAAACCTTCTACCCTGATCCTCGACCTATATATTCCTATCTAGGGTCATAT
CCTCAGTAAGCTACAGCCTACAAGTGTCATGTCCTGTCTAATCACTTCCCCAATACTTCTTCGCATTTGGTGG

Reverse sequence

GGGGGGGGAGAAATATTATTAAACTTAACACTAGATACATTTTCCTTTTTCTTTTTTGAGTTTCTCCTTTCTATATAATCCACCAAATGC
GAAAAAGTATTGGGGAAGTGATTAAACAGGACATGACACTTGTAGGCTGTAGCTTACTGAGGATATGACCCTAAATAGGAATATATAGGT
CGAGGATCAGGGTAAAAGGTTTGATTCTTCCACAACTAAATTAGTTCTATACAAGAAGATTAAAAGGGAAGAAAACAAATCATAAAAGAG
TATTGAATCTGAAACTAAAGATTTGAGATAGTCAGGCTCAAATTAAATGGGGCTTGTCCGACCATTCTATTGTGATTGTTCAGGGTTCTA
GGAAAAAATGGGGGGCAAAAAAATCCTAGGGAATATCGAATGGTATTAGTATATTGTACCGAATACCGTATTCAAAAATTTTACTCCTGA
ATACCGTATTAAAACCAAATTACCACAATTCTTTGTCCGGGTTGGCAATTTGTTTTGGTGATGTATGCCCAGCTG

RFLP sequence matches to unigenes

None

Mapped locations

Map: Tomato-EXPIMP 2009
Map version 126 (location: 53507)
Chromosome 12
Position 39.30 cM
Confidence uncalculated
Protocol RFLP

Tomato-EXPIMP 2009

Map: Tomato - Kazusa and SolCAP markers mapped to genome
Map version 105 (location: 50341)
Chromosome 12
Position 47.13 MB
Confidence uncalculated
Protocol unknown

Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map
Map version 103 (location: 48276)
Chromosome 12
Position 58.58 cM
Confidence uncalculated
Protocol unknown

Kazusa F2-2000 genetic map

Map: Sun1642 x LA1589
Map version 85 (location: 43827)
Chromosome 12
Position 51.60 cM
Confidence uncalculated
Protocol INDEL

Sun1642 x LA1589

Map: Yellow Stuffer x LA1589
Map version 83 (location: 43578)
Chromosome 12
Position 57.10 cM
Confidence uncalculated
Protocol RFLP

Yellow Stuffer x LA1589

Map: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589
Map version 79 (location: 43287)
Chromosome 12
Position 53.40 cM
Confidence uncalculated
Protocol INDEL

Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589

Map: Tomato-EXPIMP 2008
Map version 55 (location: 40828)
Chromosome 12
Position 55.00 cM
Confidence uncalculated
Protocol SSR

Tomato-EXPIMP 2008

Map: Tomato-EXPEN 2000
Map version 52 (location: 39895)
Chromosome 12
Position 66.00 cM
Confidence CF(LOD3)
Protocol RFLP

Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992
Map version 28 (location: 8472)
Chromosome 12
Position 47.60 cM
Confidence I(LOD2)
Protocol RFLP

Tomato-EXPEN 1992

Map: Tomato-EXPIMP 2001
Map version 26 (location: 8475)
Chromosome 12
Position 57.00 cM
Confidence F(LOD3)
Protocol RFLP

Tomato-EXPIMP 2001

Overgo hybridization and physical mapping

TG111 was used as an overgo probe on plate 16 [well G10]

Plausible BAC Matches: P136L06

Overgo Sequences

A sequence

CCTCAGTAAGCTACAGCCTACAAG

B sequence

TAGACAGGACATGACACTTGTAGG

AB sequence

CCTCAGTAAGCTACAGCCTACAAGTGTCAT

Marker sequence

GGGGGGGGGGTTCGATACACCCTTAGCTCAAGTAAAGCATTGTAAAATCA
AGTAGGAAATGAAATATATTGAAGCAACAGCTGGGCATACATCACCAAAA
CAAATTGCCAACCCGGACAAAGAATTGTGGTAATTTGGTTTTAATACGGT
ATTCAGGAGTAAAATTTCTGAATACGGTATTCGGTACAATATACTAATAC
CATTCGATATTCACTAGGATTCTTTTGCCCACCATTTCTTCCTAGAACAC
TGAACAATCACAATAGAATGGTCGGACAAGCACCATCTAATCTGAGCCTG
ACTATCTCAAATCTCTAGTTTCAGATTCAATACTCTTTTATGATTTGTTT
TCTTCCCTTTTAATCTTCTTGTATAGAACTAATTTAGTTGTGGAAGAATC
AAACCTTCTACCCTGATCCTCGACCTATATATTCCTATCTAGGGTCATAT
CCTCAGTAAGCTACAGCCTACAAGTGTCATGTCCTGTCTAATCACTTCCC
CAATACTTCTTCGCATTTGGTGG

Genomic location of TG111

%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D182 marker 182