SGN Marker T1546
SGN-M2085
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 30.04
Tomato EST read: TPTBB35TH
Arabidopsis best BAC match: AB016886.1
Arabidopsis position: 5.1710000
Arabidopsis identities: 0.933
Best GenBank protein hit: BAB11329.1
Evalue: 9.7e-78
Identities: 0.877
Description: kinesin-like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTBB35TH
Arabidopsis best BAC match: AB016886.1
Arabidopsis position: 5.1710000
Arabidopsis identities: 0.933
Best GenBank protein hit: BAB11329.1
Evalue: 9.7e-78
Identities: 0.877
Description: kinesin-like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1546 was used as an overgo probe on plate 7 [well F2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GCTAGAAGCGCGTAAATCTTCAGG
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B sequence
AACTGAGTTCTCGCGACCTGAAGA
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AB sequence
GCTAGAAGCGCGTAAATCTTCAGGTCGCGA
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Marker sequence
GGGAAGAAGGAATGAGTATGAGAGACATAAATTGCTAGCTTTAAATCAAC
GACAAAAGATGGTTCTTCAAAGAAAGACGGAGGAGGCTGCTATGGCAACT AAGAGACTAAAAGAATTGCTAGAAGCGCGTAAATCTTCAGGTCGCGAGAA CTCAGTTACTAGCAATGGCCATGTAGCAAATGGACAGAGCAATGAGAAAT CGTTGCAACGTTGGCTTGATCATGAGCTTGAAGTGATGGTGAATGTTCAT GAAGTTCGTCATGAGTATGAGAAGCAAAGTCAAGTACGAGCCGCACTTGG TGAAGAGCTAGCAGTTTTGAAACAAGTTGATGAATTTGCTTCAAAAAGAC TGAGTCCTCCAAGGGGTAAAAATGGTTTCTCTAGGGCATCTTCAATGTCG CCAAATGCTAGAATGGCACGAATTGCTTCTCTAGAGAATATGTTAGGCAT TTCATCCAATTCCCTAGTTGCAATGGCTTCACAACTTTCAGAAGCAGAAG AACGAGAGCGTGCCTTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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