SGN Marker TG533
SGN-M303
| Synonyms |
| Locus associations |
| RFLP details |
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Insert size
2100
|
Vector
pGEM4Z
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Cutting Site
PST1
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Drug Resistance
AMP
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Image
TG533 image not available
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Forward sequence
TTGTTCTTGATGTTTTTTTAGTAGTATGACGGGTGTAAAGATTACTTATGTAGTTCATATATATATAAATAAAAAAGTTTGACAACTTCA
AAATTTTGGATGCAAGTTCTTAGTATTGATATGCAAAAAAAATTATGATGAAAACTAATAATAGGTAATTTGGTAAAACTGATGCAGTTT ACGTAGTGTACTCAGTATTCAAGATTATTTTATTAAAATAAAAATTGCTGTAAAAAACAATCATATACATATATAGAGTAAAACAAAAAG TTAATAATTAAATTATTTTTGATAAAATAAAGGTCATTATTTTTAACATGCTAACAATAAAAAGTGTGTTCCAGCAGTTGAGACATACGG ACTAACTTGCTACATTATTATTATATTATTAATAGGTTGCTAGGAAATTGTTTACGTAAAAATTAAATACCGTATATATATCGTATAAAT ATATTATAATTGATAGTTGATTAGTAGATAAATTGTTCATATATATTGTGTTTG |
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Reverse sequence
GGAGACAGCTTGCATGCCTGCAGTTCAATAAAACTGGTGTTCCTTCAACATCCACCATAACATTCATAAAATTGTTCCCTTGTATCAGTT
TTAAATTTTACCAAAATTAGAGCTACAACTTAAAAAGATATAATGCATATTTATGTGGAGCATGCAAGGGCAGATATAGATATATCCTAA CAAAACCAAGTCTATACCCGAGACCTTTTGTCCAACTGCACTGGTAACACTTTTAAGTCCCAGCAAAGATATGTATGTGAAAATATTTCA ACAAATACAGAACCCAAAATCTCACATGTACAATGAGGTCATTGAAGATTGAAACTATCATCAAATTAAAATCTTGAACTGTAATTGATA AGCTAAAGGTAAAAGCAAACTCCTCTTATTTATTTTACCTTTTAGAAAAACATCAGTTGCAGCAGAAACAGTGTTGGCAGCTCCAGCAGA AATATGGTGATGGTGTAAAGGTAAAAGCACCTGAAAATCTGAAGCTACTTTAGATACCTTTTCATCTGTAACTCTGTTTTTTTCTGCAAA GA |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U150967 | 9.4e-40 | 82 (15.1% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG533 was used as an overgo probe on plate 2 [well A4]
Plausible BAC Matches: P043F09, P204B17, P204A17, P067J14, P293B19, P046N24, P291K24, P051F23, P271B07
Overgo Sequences
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A sequence
GTGTGTTCCAGCAGTTGAGACATA
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B sequence
GTAGCAAGTTAGTCCGTATGTCTC
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AB sequence
GTGTGTTCCAGCAGTTGAGACATACGGACT
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Marker sequence
TTGTTCTTGATGTTTTTTTAGTAGTATGACGGGTGTAAAGATTACTTATG
TAGTTCATATATATATAAATAAAAAAGTTTGACAACTTCAAAATTTTGGA TGCAAGTTCTTAGTATTGATATGCAAAAAAAATTATGATGAAAACTAATA ATAGGTAATTTGGTAAAACTGATGCAGTTTACGTAGTGTACTCAGTATTC AAGATTATTTTATTAAAATAAAAATTGCTGTAAAAAACAATCATATACAT ATATAGAGTAAAACAAAAAGTTAATAATTAAATTATTTTTGATAAAATAA AGGTCATTATTTTTAACATGCTAACAATAAAAAGTGTGTTCCAGCAGTTG AGACATACGGACTAACTTGCTACATTATTATTATATTATTAATAGGTTGC TAGGAAATTGTTTACGTAAAAATTAAATACCGTATATATATCGTATAAAT ATATTATAATTGATAGTTGATTAGTAGATAAATTGTTCATATATATTGTG TTTG |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG533
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| User comments |
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