SGN Marker TG536
SGN-M309
Synonyms |
Locus associations |
RFLP details |
Insert size
1500
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG536 image not available
|
Forward sequence
AGAAGTATTTCCAGGGCCACGGCTAGGCTAACGAATTTCAGCCATCCACTTACCCTACGTACGTTGTAGAACATCCTTGTACGTGCAACT
AACATTTCCAGGGCCGCCTTTTTCTGCCATGCAACCTTTTCCTGAAACTTGCTTGGTTGATTTACTTCTTCCATGTATAGAGGTGTAACA TACTCAGAGTAACGAATTATGAAACGTTATTGACAATAACGTTTTATGTTTGTTTACTCTGTTAGATTTTTGTCTTTTTGTTGTTGAATT TTCTTGAATAAAATATTACCTAAAACTTTACTGAGAACTACGTTTATAATAGTTTAGTAAAATTACAAAAAAACATATTATCCTGGTAAC TTAATTTTAATAATGGCCTGCTTTGCTCAAAAATACACACCAGCAAACTACAAGTCCGTAACTCAAGTATAAGTAAATATTCTAAGTTCA CATGTATGCAGGAAAAATCAAATTCCTCCATTTTTTCCTCT |
Reverse sequence
GGAGACAGCTTGCATGCCTGCANATTCTCTAATTCCTTTTAAGAATCGATTCACTAAAAATAGTTCCTTTATTTTTAAATTTCTCAACTG
ATTGGGCTCAATTTTAGTCCATCTTATGGCGTACTTGTTTTATTGAGGTGTTAATAGGTGGAGGGGAAGGAGAATGGGAAATTATAAGGT ATGGAATGGAATGTCACCAACATCATCTGGTATTGTTGTTGTTTATATTTCTTTTTTTGCAGGCTTTCTATTGCTTAACTTATTGGTTGT TATGTTTACTTCCTATTTTCTTCTTTTGTATACTTAAATTTGTTGTATTTGCGTTGCAAGTCTTTCAGAAAACATTCTTTCTATCTCCAC GAGGTAGTAGTAAAGCATGCAGTCACTTTACCCTACGCTGACTCCATCAATAGGATGTTTTATGTGCAAGTCACCACTATAATGTCATTT CATTTATGAATTCCTCTTTTAGTATTGAAAATGGAAGTCTATATTTCTTTCTAAAAGAGAAGAAAACCTAAGGAAGTACCACATTGTCCA CTTTTG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U148379 | 9.1e-09 | 34 (6.9% of RFLP seq) | + |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG536 was used as an overgo probe on plate 12 [well A8]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GGCTAGGCTAACGAATTTCAGCCA
|
B sequence
ACGTAGGGTAAGTGGATGGCTGAA
|
AB sequence
GGCTAGGCTAACGAATTTCAGCCATCCACT
|
Marker sequence
AGAAGTATTTCCAGGGCCACGGCTAGGCTAACGAATTTCAGCCATCCACT
TACCCTACGTACGTTGTAGAACATCCTTGTACGTGCAACTAACATTTCCA GGGCCGCCTTTTTCTGCCATGCAACCTTTTCCTGAAACTTGCTTGGTTGA TTTACTTCTTCCATGTATAGAGGTGTAACATACTCAGAGTAACGAATTAT GAAACGTTATTGACAATAACGTTTTATGTTTGTTTACTCTGTTAGATTTT TGTCTTTTTGTTGTTGAATTTTCTTGAATAAAATATTACCTAAAACTTTA CTGAGAACTACGTTTATAATAGTTTAGTAAAATTACAAAAAAACATATTA TCCTGGTAACTTAATTTTAATAATGGCCTGCTTTGCTCAAAAATACACAC CAGCAAACTACAAGTCCGTAACTCAAGTATAAGTAAATATTCTAAGTTCA CATGTATGCAGGAAAAATCAAATTCCTCCATTTTTTCCTCT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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