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SGN Marker TG542

SGN-M328

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1200
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG542 RFLP image
Forward sequence
AGACAAGCTTGCATGCCTGCAGAGGAGAGCAAGTTTATTATGAGGAAGGGCGTTGGTGAACCTGGCGACCTTAATGGTATGGTGTTGAGT
GCCAGCAGGACCCTCTGGCTGCCGATAACACATGAACGTTTGTCTGACTTCCTGCGAAATGAACAGACGAGAGGTCAATGGGATGTGTTG
TCCCACGGTGGTTCCGTGCTCCGAATAGTCCACATTGCCTGGGGTCAGGATCCTGGCACTAGCATCCCTCTGTTTCGCACTACTGTAAGT
GAAATTGG
Reverse sequence
CCTGCAGAATTAGGGGAGTACTAATCCTATTACAAAAACCACCACGAAAATCATAATGAGATATTGATAAACCAAAATCCAAATATATTA
AAAAAACCATCCAAATAAGTTCAACAACTTGCCAAAAACGCAAGTAAGATTCGAACACGAACAAACCAACAGTACTAATAACAAAAACAA
CCACCTGGAGAGACTATCATATCACACAGTAACCTTAAGAGGGCGAACGAAAGTCAATACGCGAACCACACCGATATCCTCCATGCCTCA
TCAAAACACTAACTAGCTAGTCAACCCGAGGGAACCACCTCGGTGCGTTCATTGACTCAA
RFLP sequence matches to unigenesNone
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 40079)
Chromosome
3
Position
54.50 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992   
Map version
28 (location: 8899)
Chromosome
3
Position
49.30 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG542 was used as an overgo probe on plate 4 [well E5]

Plausible BAC Matches:   P112A05,   P041A13,   P144I20

 Overgo Sequences

A sequence
GACTTCCTGCGAAATGAACAGACG
B sequence
CATCCCATTGACCTCTCGTCTGTT
AB sequence
GACTTCCTGCGAAATGAACAGACGAGAGGT
Marker sequence
AGACAAGCTTGCATGCCTGCAGAGGAGAGCAAGTTTATTATGAGGAAGGG
CGTTGGTGAACCTGGCGACCTTAATGGTATGGTGTTGAGTGCCAGCAGGA
CCCTCTGGCTGCCGATAACACATGAACGTTTGTCTGACTTCCTGCGAAAT
GAACAGACGAGAGGTCAATGGGATGTGTTGTCCCACGGTGGTTCCGTGCT
CCGAATAGTCCACATTGCCTGGGGTCAGGATCCTGGCACTAGCATCCCTC
TGTTTCGCACTACTGTAAGTGAAATTGG
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG542  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D328 marker 328
User comments 
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