SGN Marker TG110
SGN-M344
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
500
|
Vector
pUC
|
Cutting Site
SRD/PST1
|
Drug Resistance
AMP
|
Image |
|
Forward sequence
GGGGATCGTCGACCTGCAGGGGGCTCAGACCCCTTACTCAAGAGGGCTTCTCTTCCTCTTATTGTCAGAAGTCAAATGGTTAAGTCCAGT
TGGGGCAACTGGGCCAGACGACATTGATAGCGGAGTTTCCGTGGTAAGGTACAAAGCTTTTTGTCTGGGTCTTGGGCAGACGTACTCAAC TGGTACAAATAGAAAGGCTCGTCCAGTGAGTGATGACACTAGCGAGTAAACTGCAAAAGGGTCTTGCTTGGTATAATATAAGCGGATGAC TTAGTTATAATTAGCTCAGATGTGACTTCTTTGCTCGGTTTCGGTTGCTTGACTCAATAATGGCCCTTCAAAGTCATTGACTCCATATTT AGGGAACGGTTGAACTCCTTTTTTCTTTTTCAAGCTGTCGACAGTCATGTTCTTATATTTCTTTACTGTTCCGTACTAAATTCCTTTGTT CACCAATCAACTGACCCCCCCCCCCCCTGCAGC |
|
Reverse sequence
GGGGGGGGGGGGTCAGTCGATTGGTGAAAAAGGAATTTAGTACGGAACAGTAAAGAAATATAAGAACATGACTGTCGACAGCTTGAAAAA
GAAAAAAGGAGTTCAACCGTTCCCTAAATATGGAGTCAATGACTTTGAAGGGCCATTATTGAGTCAAGCAACCGAAACCGAGCAAAGAAG TCACATCTGAGCTAATTATAACTAAGTCATCCGCTTATATTATACCAAGCAAGACCCTTTTGCAGTTTACTCGCTAGTGTCATCACTCAC TGGACGAGCCTTTCTATTTGTACCAGTTGAGTACGTCTGCCCAAGACCCAGACAAAAAGCTTTGTACCTTACCACGGAAACTCCGCTATC AATGTCGTCTGGCCCAGTTGCCCCAACTGGACTTAACCATTTGACTTCTGACAATAAGAGGAAGAGAAGCCCTCTTGAGTAAGGGCTCTT GAGCCCCCTGCAGGTCGACGGATCCCCGG |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U167683 | 404 (83.6% of RFLP seq) | + | |
| SGN-U167683 | 412 (86.0% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG110 was used as an overgo probe on plate 11 [well D3]
Plausible BAC Matches: None
Non-Plausible BAC matches
P318G02,
P039J07,
P034D09,
P006A15,
P257K15,
P199F20,
P162D18,
P139H17,
P328L21,
P265F18,
P296P16,
P124H06,
P281O03,
P148L07,
P074E19,
P329B17,
P022J14,
P021C19,
P177J24,
P194N05,
P136P14,
P224M05,
P234D05,
P178K13,
P221K24,
P176A13,
P038M19,
P105I10,
P133G22,
P095L13,
P233O04,
P022G24,
P101L23,
P220G04,
P138L23,
P278O11,
P013G04,
P306P07,
P139I21,
P249E13,
P314A24,
P144J19,
P320K06,
P214H10,
P076E08,
P332M13,
P036P11,
P310L15,
P115L15,
P284O08,
P030J18,
P264A05,
P131L15,
P233G05,
P054F23,
P210E08,
P281H13,
P223G10,
P257L16,
P244A14,
P163L21,
P308G14,
P141C23,
P278A04,
P177O19,
P028C09,
P175E16,
P199P16,
P328E13,
P029M10,
P042N22,
P237L15,
P185G24,
P143A10
Overgo Sequences
|
A sequence
GCTCAGATGTGACTTCTTTGCTCG
|
|
B sequence
GTCAAGCAACCGAAACCGAGCAAA
|
|
AB sequence
GCTCAGATGTGACTTCTTTGCTCGGTTTCG
|
|
Marker sequence
GGGGATCGTCGACCTGCAGGGGGCTCAGACCCCTTACTCAAGAGGGCTTC
TCTTCCTCTTATTGTCAGAAGTCAAATGGTTAAGTCCAGTTGGGGCAACT GGGCCAGACGACATTGATAGCGGAGTTTCCGTGGTAAGGTACAAAGCTTT TTGTCTGGGTCTTGGGCAGACGTACTCAACTGGTACAAATAGAAAGGCTC GTCCAGTGAGTGATGACACTAGCGAGTAAACTGCAAAAGGGTCTTGCTTG GTATAATATAAGCGGATGACTTAGTTATAATTAGCTCAGATGTGACTTCT TTGCTCGGTTTCGGTTGCTTGACTCAATAATGGCCCTTCAAAGTCATTGA CTCCATATTTAGGGAACGGTTGAACTCCTTTTTTCTTTTTCAAGCTGTCG ACAGTCATGTTCTTATATTTCTTTACTGTTCCGTACTAAATTCCTTTGTT CACCAATCAACTGACCCCCCCCCCCCCTGCAGC |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG110
|
| User comments |
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