SGN Marker CT64
SGN-M448
Synonyms |
Locus associations |
RFLP details |
Insert size
800
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT64 image not available
|
Forward sequence
CGTTTGCAATTTTGGGGAAAATTTATTCCATTTTGCTCGATTTTTTTCTTCCATTTAATAATTTATTGTTTACTTGCAAAGAAGTAAAAA
AATTTCTTTGGATTTTTAGCCTAAGTCTTTCTCATTAAGTTGATATGCTTGTTTTAACATCTCCTGTTTTATGCTATTAGGGGAACTGTC AGCAATATCAATTTGTAAGAAACATACAGCAATCCCATGGTGTTGGTGTGGGTACCAATAAATCACCTAAATCCCCCTGGATGCCTTTCT CTATGTTATTCGGAGCTATTTCAGCTAAAGTGTCTCCAAAAGATTTGAAATTGGTTCATGCACATTATGACTTGTTCAGGAGCAAAAAAA TTTCCCGGAATGATTTCATTAGAAGGCTGAGGTTGATAGTGGGTGATCAGTTATTGAAGTCTACCATAACCAATCTCCAGTGTAAGGTAC TGTGCTCCGATCCATATATGATTTGGTAGTTTTGTACTTCCGATGGGGTG |
Reverse sequence
TTTTTTTTTTTTTTTTTTTTTTTTGACTATATAGGGACAACAGTAAGGGCTCAATACACTTTAAACTAAAGGAGAAATTCTTGGACCAAA
AAGGAAATATAAAATAAAAGGATACATATGCCACCTAAACTTATTGAAAAAAACTTGCCACCCAAACTAAAGAGTAAACCAACTTTTTTT CCTACTTCGCTTAAACCAAAATTAATATATCAATTCGAGACAAGTGCAGTTGTCAACAAACACCCCATCGGAAGTACAAAACTACCAAAT CATATATGGATCGGAGCACAGTACCTTACACTGGAAATTGGTTATGGTAAACTTCAATAACTGATCACCCACTATCAACCTCAGCCTTCT AATGAAATCATTCCGGGAAATTTTTTTGCTCCTGAACAAGTCATAATGTGCATGAACCAATTTCAAATCTTTTGGAGACACTTTAGCTGA AATAGCTCCGAATAACATAGAGAAAGGCATCCAGGGGGATTTAGGTGATTTATTG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U145216 | 1e-143 | 277 (55.4% of RFLP seq) | + |
SGN-U145216 | 1.8e-99 | 211 (41.8% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT64 was used as an overgo probe on plate 1 [well D5]
Plausible BAC Matches: P320P23, P309C23, P002L24, P003P22, P047J02, P209E19, P106E03
Overgo Sequences
A sequence
CCCGGAATGATTTCATTAGAAGGC
|
B sequence
CCCACTATCAACCTCAGCCTTCTA
|
AB sequence
CCCGGAATGATTTCATTAGAAGGCTGAGGT
|
Marker sequence
CGTTTGCAATTTTGGGGAAAATTTATTCCATTTTGCTCGATTTTTTTCTT
CCATTTAATAATTTATTGTTTACTTGCAAAGAAGTAAAAAAATTTCTTTG GATTTTTAGCCTAAGTCTTTCTCATTAAGTTGATATGCTTGTTTTAACAT CTCCTGTTTTATGCTATTAGGGGAACTGTCAGCAATATCAATTTGTAAGA AACATACAGCAATCCCATGGTGTTGGTGTGGGTACCAATAAATCACCTAA ATCCCCCTGGATGCCTTTCTCTATGTTATTCGGAGCTATTTCAGCTAAAG TGTCTCCAAAAGATTTGAAATTGGTTCATGCACATTATGACTTGTTCAGG AGCAAAAAAATTTCCCGGAATGATTTCATTAGAAGGCTGAGGTTGATAGT GGGTGATCAGTTATTGAAGTCTACCATAACCAATCTCCAGTGTAAGGTAC TGTGCTCCGATCCATATATGATTTGGTAGTTTTGTACTTCCGATGGGGTG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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