SGN Marker CT71
SGN-M467
Synonyms |
Locus associations |
RFLP details |
Insert size
500
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT71 image not available
|
Forward sequence
CTTTTTTTTTTTTTTAAACACAATATGATATATATTGTACAACAAAACATTACATCATGACCAACCATTCATAGTACGTAAATGAATGGC
TTTATTCATACTTGTTACAAGCAAAGGGTCTTAATTAAGTAGCAAGATTATTATTATCTTGTCACTTAATTTCAAAAGTTTACAATAATA ATAAATACACATAATTAAGCACTAATTAATTATTTAGTTTTGAGTCTGGGCAGCAACATATTCTTCATAAGAGCAGCAGTATTTTTTGCA TCCATATTTGTATTTTTTGCAGCAACTGTAACATTTCTTACGTTTGCCATAGCCCTTGCCATAATAATGATCGACGTTTACTGCATTCTC GTTATCCAATTTCACCGCATTGGTAGTCTCAGCTGCCAACTCCCTAGCTGCAACCTCAGAGCTTATCATTAAGAAAAAAAAAAAA |
Reverse sequence
TTTTTTTTTTTTCTTAATGATAAGCTCTGAGGTTGCAGCTAGGGAGTTGGCAGCTGAGACTACCAATGCGGTGAAATTGGATAACGAGAA
TGCAGTAAACGTCGATCATTATTATGGCAAGGGCTATGGCAAACGTAAGAAATGTTACAGTTGCTGCAAAAAATACAAATATGGATGCAA AAAATACTGCTGCTCTTATGAAGAATATGTTGCTGCCCAGACTCAAAACTAAATAATTAATTAGTGCTTAATTATGTGTATTTATTATTA TTGTAAACTTTTGAAATTAAGTGACAAGATAATAATAATCTTGCTACTTAATTAAGACCCTTTGCTTGTAACAAGTATGAATAAAGCCAT TCATTTACGTACTATGAATGGTTGGTCATGATGTAATGTTTTGTTGTACAATATATATCATATTGTGTTTAAAAAAAAAAAAAA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U164085 | 3.1e-05 | 36 (8.1% of RFLP seq) | + |
SGN-U160334 | 8.9e-52 | 162 (36.4% of RFLP seq) | + |
SGN-U143167 | 418 (93.9% of RFLP seq) | + | |
SGN-U160332 | 360 (80.9% of RFLP seq) | + | |
SGN-U164085 | 3.1e-05 | 36 (8.1% of RFLP seq) | - |
SGN-U160334 | 8.8e-52 | 162 (36.5% of RFLP seq) | - |
SGN-U143167 | 418 (94.1% of RFLP seq) | - | |
SGN-U160332 | 360 (81.1% of RFLP seq) | - |
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| ![]() Tomato-EXHIR 1997 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT71 was used as an overgo probe on plate 14 [well D12]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GCAGCAACTGTAACATTTCTTACG
|
B sequence
CAAGGGCTATGGCAAACGTAAGAA
|
AB sequence
GCAGCAACTGTAACATTTCTTACGTTTGCC
|
Marker sequence
CTTTTTTTTTTTTTTAAACACAATATGATATATATTGTACAACAAAACAT
TACATCATGACCAACCATTCATAGTACGTAAATGAATGGCTTTATTCATA CTTGTTACAAGCAAAGGGTCTTAATTAAGTAGCAAGATTATTATTATCTT GTCACTTAATTTCAAAAGTTTACAATAATAATAAATACACATAATTAAGC ACTAATTAATTATTTAGTTTTGAGTCTGGGCAGCAACATATTCTTCATAA GAGCAGCAGTATTTTTTGCATCCATATTTGTATTTTTTGCAGCAACTGTA ACATTTCTTACGTTTGCCATAGCCCTTGCCATAATAATGATCGACGTTTA CTGCATTCTCGTTATCCAATTTCACCGCATTGGTAGTCTCAGCTGCCAAC TCCCTAGCTGCAACCTCAGAGCTTATCATTAAGAAAAAAAAAAAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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