SGN Marker CT148
SGN-M528
Synonyms |
Locus associations |
RFLP details |
Insert size
1100
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TCTCCAATTAAGCTTCGCGAAGAATCTACAAAAAAAGAGTCCTCCTTCAGCTCTTCATATGGAAACGCATTCTTCAAATCACCAAACTTC
CTCCGATAATGGAGTCGTTTTGCCTGAGTTGCTGACAGAGTTTATGGTGGATATGTCGTGTCAAGGCTGTGTTAGTGCTGTCAAGAGCAA ATTGCAAACCGTAGAAGGAGTCAAGAATGTAGATGTGGATCTTGATAATCAAGTAGTGAGAATTCTTGGATCTTCACCTGTGAAGACAAT GACTGAAGCCTTGGAGCAAACAGGTCGAAAAGCCCGTCTGATTGGGCAAGGAGTACCGGATGATTTCCTTATATCTGCTGCCGTTGCCGA ATTCAAAGGACCAGATATTTTTGGTGTTGTTCGCTTGGCTCAAGTCAATATGGAATTAACTAGGATTGAAGCAAACTTCAGTGGCCTGTC ACCTGGGAAGCATGCTTGGTCTATTAATGAATTTGG |
Reverse sequence
not available
|
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U161931 | 1.3e-35 | 75 (15.4% of RFLP seq) | + |
SGN-U161931 | 3e-175 | 330 (67.9% of RFLP seq) | + |
SGN-U146683 | 486 (100.0% of RFLP seq) | + |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-LXCHM 2007 |
|
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT148 was used as an overgo probe on plate 11 [well G12]
Plausible BAC Matches: P004P13, P066O08, P165B06, P036F16, P020K14
Overgo Sequences
A sequence
CCTCCGATAATGGAGTCGTTTTGC
|
B sequence
TCTGTCAGCAACTCAGGCAAAACG
|
AB sequence
CCTCCGATAATGGAGTCGTTTTGCCTGAGT
|
Marker sequence
TCTCCAATTAAGCTTCGCGAAGAATCTACAAAAAAAGAGTCCTCCTTCAG
CTCTTCATATGGAAACGCATTCTTCAAATCACCAAACTTCCTCCGATAAT GGAGTCGTTTTGCCTGAGTTGCTGACAGAGTTTATGGTGGATATGTCGTG TCAAGGCTGTGTTAGTGCTGTCAAGAGCAAATTGCAAACCGTAGAAGGAG TCAAGAATGTAGATGTGGATCTTGATAATCAAGTAGTGAGAATTCTTGGA TCTTCACCTGTGAAGACAATGACTGAAGCCTTGGAGCAAACAGGTCGAAA AGCCCGTCTGATTGGGCAAGGAGTACCGGATGATTTCCTTATATCTGCTG CCGTTGCCGAATTCAAAGGACCAGATATTTTTGGTGTTGTTCGCTTGGCT CAAGTCAATATGGAATTAACTAGGATTGAAGCAAACTTCAGTGGCCTGTC ACCTGGGAAGCATGCTTGGTCTATTAATGAATTTGG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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