SGN Marker CT177
SGN-M606
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
300
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT177 image not available
|
|
Forward sequence
AAGAAAAACCTCTTCTTTTTTTGGTTCACCAAGGTTGTTTACTTGTTTTGCTGCTAAGGGGTTTCCTGATACTGAGTCTATTATGAGTCC
TACTTCAATTCTTGATAGTAAACCTTTCACTGTTCTGAGAAACCCCTTTTGGTCTGAGCCAAAATCTCCTAAACCAGAAAGTAGAGTTCA TTTTCAGAAACTTGACTCAAAAGGGGTTGGTCTTGGTCTTGTTGATGCTCTGATTGATGAAAAATCTGATTCTAAAGAGAT |
|
Reverse sequence
ATCTCTTTAGAATCAGATTTTTCATCAATCAGAGCATCAACAAGACCAAGACCAACCCCTTTTGAGTCAAGTTTCTGAAAATGAACTCTA
CTTTCTGGTTTAGGAGATTTTGGCTCAGACCAAAAGGGGTTTCTCAGAACAGTGAAAGGTTTACTATCAAGAATTGAAGTAGGACTCATA ATAGACTCAGTATCAGGAAACCCCTTAGCAGCAAAACAAGTAAACAACCTTGGTGAACCAAAAAAAGAAGAGGTTTTTCTT |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U144795 | 2e-134 | 261 (100.0% of RFLP seq) | + |
| SGN-U144795 | 2e-134 | 261 (100.0% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Eggplant-COSII |
|  Tomato-EXPEN 2000 |
|  Eggplant-LXM 2002 |
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
CT177 was used as an overgo probe on plate 15 [well A9]
Plausible BAC Matches: None
Overgo Sequences
|
A sequence
GGTCTGAGCCAAAATCTCCTAAAC
|
|
B sequence
TGAACTCTACTTTCTGGTTTAGGA
|
|
AB sequence
GGTCTGAGCCAAAATCTCCTAAACCAGAAA
|
|
Marker sequence
AAGAAAAACCTCTTCTTTTTTTGGTTCACCAAGGTTGTTTACTTGTTTTG
CTGCTAAGGGGTTTCCTGATACTGAGTCTATTATGAGTCCTACTTCAATT CTTGATAGTAAACCTTTCACTGTTCTGAGAAACCCCTTTTGGTCTGAGCC AAAATCTCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACTCAA AAGGGGTTGGTCTTGGTCTTGTTGATGCTCTGATTGATGAAAAATCTGAT TCTAAAGAGAT |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of CT177
|
| User comments |
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