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SGN Marker TG638

SGN-M639

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
900
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG638 image not available
Forward sequence
not available
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGATGATACTATCTTATATATCACATTCCTGCTACTTCTCCATTTACATCACTTCTCTTCCCATATGAG
TTCCTCCTCCCATTCCGTATATGTTCGTTGGATGTGCATTTAGTTGACCAGTCTAAGTTATATGTGTTCAAGATAATCACTTTCAAAGAA
CAAACATTGAATAGTGTTGGCTATAACACAATTGACATTGTAATTATATATCCATCTCCAGTTTGTCAATGTATCACAACTATATATTCT
GTCCAGTTCTACTAATCTTAGTATAAATTTCGATTTTAGTACATCTTGATTGTAAATCACTCCCTTCTAGCTAACCTTTGCATATTATCC
TTGTAGTTTGTTATATGTACTTTTTATGGTCCTGGACATTGTACTCTGGTTGTTTTTAAAGTTACAATATTTACAACTTTTTGTAGAAAC
GATGCGACATAAATAAGGTGAATCGAACTAAGCTTAAATCTAATCATTTAATGGGGTCAAAGGCTTTTGTAGCTGCTTGTGCT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1461361.5e-4189 (16.7% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9693)
Chromosome
5
Position
44.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG638 was used as an overgo probe on plate 15 [well E1]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
CACTTCTCTTCCCATATGAGTTCC
B sequence
ATACGGAATGGGAGGAGGAACTCA
AB sequence
CACTTCTCTTCCCATATGAGTTCCTCCTCC
Marker sequence
GGAGACAGCTTGCATGCCTGCAGATGATACTATCTTATATATCACATTCC
TGCTACTTCTCCATTTACATCACTTCTCTTCCCATATGAGTTCCTCCTCC
CATTCCGTATATGTTCGTTGGATGTGCATTTAGTTGACCAGTCTAAGTTA
TATGTGTTCAAGATAATCACTTTCAAAGAACAAACATTGAATAGTGTTGG
CTATAACACAATTGACATTGTAATTATATATCCATCTCCAGTTTGTCAAT
GTATCACAACTATATATTCTGTCCAGTTCTACTAATCTTAGTATAAATTT
CGATTTTAGTACATCTTGATTGTAAATCACTCCCTTCTAGCTAACCTTTG
CATATTATCCTTGTAGTTTGTTATATGTACTTTTTATGGTCCTGGACATT
GTACTCTGGTTGTTTTTAAAGTTACAATATTTACAACTTTTTGTAGAAAC
GATGCGACATAAATAAGGTGAATCGAACTAAGCTTAAATCTAATCATTTA
ATGGGGTCAAAGGCTTTTGTAGCTGCTTGTGCT
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG638  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D639 marker 639
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