SGN Marker C2_At1g09250

SGN-M6556
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U196783---
Lycopersicon CombinedSingleSGN-U217757---
Solanum tuberosumSingleSGN-U246079---
ArabidopsisSingleAt1g09250 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 24954)
Chromosome
1
Position
2.99 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41013
Forward primer (5'-3')
AACTCCAGTCACTCGCGAGAATCC
Accessions and product sizes
Solanum pennellii TA56
1500
Solanum lycopersicum TA209
1500
Approximate temperature
55°C
Reverse primer (5'-3')
AGCGGCAACTGATCCTGCTCC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
850
Solanum lycopersicum TA209
1200
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g09250  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6556 marker 6556
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