SGN Marker TG500
SGN-M66
Synonyms |
Locus associations |
RFLP details |
Insert size
1700
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG500 image not available
|
Forward sequence
AACTTTCTCGGCAGATGCATGTGTGAAGAACTCCACAAAACCATACCCTTCAGAGAAACCAGTCTGTTTATTGCGAATTACCTTGATGGA
GGCAACCTGCACAAACAAGAACCATATAAGCTGACAAGAAAATTATGAGGTCAAAGACTTCACTTTTTCCCCATATGGAGAAATCATTTT TGGGTGGGCAATGGGTCAATATTTAACCTCCAAGCACATTCAAGAATTTCAAATGGCCTGAATCATCATGCAAGAGTTTCTCATTCTGCT TCCAACTTAATAAATGTTGAATAGCTACCAGGAGTTTATATGATGTCACTAATTACTTAGTATTTTCTTGTCATTCAATATGAATACTAG AGAGCCTCAATGTTCACCAACTTGGGTGTGTCATGACATATCATGCTCATTGGCATGGGCAGACATATCATGTTCATTGACATATGCAAT ACAATTCATGTGTGTTGTGCTGTTAGTACAGAG |
Reverse sequence
CGGTTGTACCCGTGGCGGCGGCGGCGCCAGCAGGGGCGCAGCAGCAGCCGTGGGTGGCGATGCAGTACCCGGCGGCGGCGATGGTAATGC
AGCATCCAATGATGCCGGCCCCACATTATCCACCGCACTATATGCCGTTTCATCCACAACACCATCACCACCTTATCCACCACCCACCGC ACTCACCGTCACCGCATCAACAAGGTGGAGGTGGAGGATCTAATAATAATGAGAATCGAACGATCTGGGTGGGTGACCTTCATAATTGGA TGGATGAGGATTATCTACGTAGCTGCTTCGCTACCACTAATGAGGTATAAGTCTGTACCAGTTTACGCTCATGCATATATTTATATATAT TTGGTGCTCTGTTTTTTTAAACACGTGATTTATGTTTTTCTATAAATGTTTTCATGTGATTAATTACAGTAAAATCTGGATTTATTGAAT GGGGTAGAATGATGGCAGGTAGCTACTAGTTAGCCGCCGTCACAAGTAAAGT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U145179 | 2.4e-49 | 98 (20.3% of RFLP seq) | + |
SGN-U161404 | 1.1e-60 | 117 (23.3% of RFLP seq) | - |
SGN-U145179 | 2e-179 | 316 (62.9% of RFLP seq) | - |
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| ![]() Sun1642 x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG500 was used as an overgo probe on plate 7 [well B5]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TAGAGAGCCTCAATGTTCACCAAC
|
B sequence
GTCATGACACACCCAAGTTGGTGA
|
AB sequence
TAGAGAGCCTCAATGTTCACCAACTTGGGT
|
Marker sequence
AACTTTCTCGGCAGATGCATGTGTGAAGAACTCCACAAAACCATACCCTT
CAGAGAAACCAGTCTGTTTATTGCGAATTACCTTGATGGAGGCAACCTGC ACAAACAAGAACCATATAAGCTGACAAGAAAATTATGAGGTCAAAGACTT CACTTTTTCCCCATATGGAGAAATCATTTTTGGGTGGGCAATGGGTCAAT ATTTAACCTCCAAGCACATTCAAGAATTTCAAATGGCCTGAATCATCATG CAAGAGTTTCTCATTCTGCTTCCAACTTAATAAATGTTGAATAGCTACCA GGAGTTTATATGATGTCACTAATTACTTAGTATTTTCTTGTCATTCAATA TGAATACTAGAGAGCCTCAATGTTCACCAACTTGGGTGTGTCATGACATA TCATGCTCATTGGCATGGGCAGACATATCATGTTCATTGACATATGCAAT ACAATTCATGTGTGTTGTGCTGTTAGTACAGAG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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