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SGN Marker C2_At1g16970

SGN-M6637
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U205173---
Lycopersicon CombinedSingleSGN-U224580---
Solanum tuberosumSingleSGN-U263078---
ArabidopsisSingleAt1g16970 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25039)
Chromosome
1
Position
5.80 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41041
Forward primer (5'-3')
ACAATTACTTGGCTTGATTCGATGAC
Accessions and product sizes
Solanum lycopersicum TA209
225
Solanum pennellii TA56
225
Approximate temperature
55°C
Reverse primer (5'-3')
AGACGAAGATGTCCAGTTGAAACTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
225
Solanum pennellii TA56
175
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g16970  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6637 marker 6637
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