SGN Marker C2_At1g18340

SGN-M6650
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301329 (SGN)
119863 (CGN)
---
Lycopersicon CombinedSingleSGN-U225853---
Solanum tuberosumMultipleSGN-U258852---
ArabidopsisSingleAt1g18340 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25052)
Chromosome
1
Position
6.31 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41044
Forward primer (5'-3')
TCAATTTTCTCAGCTCAACGTTCAATG
Accessions and product sizes
Solanum lycopersicum TA209
550
Solanum pennellii TA56
550
Approximate temperature
55°C
Reverse primer (5'-3')
ATATACACCACCAGTTATGTAAGAAGC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
300
Solanum lycopersicum TA209
550
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g18340  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6650 marker 6650
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