SGN Marker TG505
SGN-M69
Synonyms |
Locus associations |
RFLP details |
Insert size
1200
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG505 image not available
|
Forward sequence
TCTAATCTGTGGCTGAAGAAGAGTTTCTCTAAATTTACAAAAAGAAATAAAGTGGATGTTAAAAATGAGAAAGAAAGATTACCCATCTAT
CCCAAACTAACTGCTTTACTTTCTTTTGATTGTCCCCAAACTTTGTCACTTCTCTGAATAGGTTCTCTACAATCTTTTGTACCTTTTCAA TATATAATACTGCAAGAGATCACACATATGACTTTTTTTCCTGAAATGGTAAATGTTATTGATGTCAAAACTAGCAATTAGAAAGTGTTG TGATAACATCCAAAAAGTTAAGGGAAAGAAAACCCTGGGTATCTATACAAAAGATCCAATGAGTTGTAACAGGGTATCATTATCCTCAAT CTGCCATTCCCTTCTATACCAAGTTATGAACAAATTTGATCTTCACGATTGAGTTGTTCCTCGCTTCAAAGAACCTCGGGTTTCTTTCTT T |
Reverse sequence
GCATGCCTGCAGTCATTGTAGGGCAGTTCTCTGGTGTACAGAACTCGGTCAACGTGCCATAAAGCAGATTCACCTGGTTGAAGAAATCGA
CAGCTGGATATTACAAGATAAAGCCTCCATTCAGTTTTGAAATTTAGATTCAATAATAGCAACAACTCACCAAAGAAACAAAATTAATGT GTGTGTGAGCATTATGAGAGCAATGATAACATAGTATATGAAGCACTCTGTTCTCACAATTGGCTTCAAAGGGAACTCACATGTAAGCAG AGCATGAAAGTTTCTATCTAGAATTCTTTCTGCTGCAATTCATTTTAGTTTGTACCAGCCTTTAAACATCATTAAAAAGTCTAACTGTTA GTAAGCAAATCATCAAAAGTTGTTGTACAAAATGTGAATTAATAACACTTGGTGGAACTTCTTAGGTATGGTATGTTCATGTGGCATTTG GCTGCCGAAAATAGAGATCAAGCTACTACATAATTTAAA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U156387 | 2e-151 | 290 (64.3% of RFLP seq) | + |
SGN-U145242 | 2.9e-27 | 89 (18.2% of RFLP seq) | - |
SGN-U145241 | 5.6e-44 | 89 (18.2% of RFLP seq) | - |
SGN-U156387 | 469 (95.9% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG505 was used as an overgo probe on plate 12 [well D8]
Plausible BAC Matches: None
Overgo Sequences
A sequence
ACGATTGAGTTGTTCCTCGCTTCA
|
B sequence
GAAACCCGAGGTTCTTTGAAGCGA
|
AB sequence
ACGATTGAGTTGTTCCTCGCTTCAAAGAAC
|
Marker sequence
TCTAATCTGTGGCTGAAGAAGAGTTTCTCTAAATTTACAAAAAGAAATAA
AGTGGATGTTAAAAATGAGAAAGAAAGATTACCCATCTATCCCAAACTAA CTGCTTTACTTTCTTTTGATTGTCCCCAAACTTTGTCACTTCTCTGAATA GGTTCTCTACAATCTTTTGTACCTTTTCAATATATAATACTGCAAGAGAT CACACATATGACTTTTTTTCCTGAAATGGTAAATGTTATTGATGTCAAAA CTAGCAATTAGAAAGTGTTGTGATAACATCCAAAAAGTTAAGGGAAAGAA AACCCTGGGTATCTATACAAAAGATCCAATGAGTTGTAACAGGGTATCAT TATCCTCAATCTGCCATTCCCTTCTATACCAAGTTATGAACAAATTTGAT CTTCACGATTGAGTTGTTCCTCGCTTCAAAGAACCTCGGGTTTCTTTCTT T |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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