SGN Marker TG589
SGN-M7
Synonyms |
Locus associations |
RFLP details |
Insert size
700
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG589 image not available
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Forward sequence
ATAATGCTGGTTTACGAGTTTATGCCTAATGGTACTCTGAGAGACCACCTATCTGGTAAATAATTATATAATTCACATTGCTCTTGCCTC
CATTTATTTGTGCAAATCTTTTCCTTCTAGCACTTTATTTTGATAAGGAAAATATTTAAGTATGCAAACGATTAACTAATCCACAACATC TAGCTTTGTCCCCAACGAAATCCCTTCCGATGAAAATTGTCGAATATCAGTCTTTCTGCTGGTTAATGTTAGGGGATTGGTTTTGGGGGA AAGCACTAGCAGAAATCAAGTCTTTGACCATATTATATGGGATTTAATGGGTTGACTTGTGGTGTGACAGGTAAATGTAAAGAACCTCTA AGTTTTGCTATGCGATTGAAAGTTGCCTTAGGTTCCGCTAAGGGCATTCTATACTTGCACACGGAGGCTGATCCTCCCATATTCCATCGA GATATCAAGGCAAGCAATATATTGCTAGACTCTAAGTTTATTGCAAAGGTGGCTGACTTTGGACTTTCACGGCTTGCTCCAGTTCCAGAT CTTGAAGGGACTCTGCCTGCTCATGTATCGACAGTTGTTAAGGGCACTCCGGTGAGCATTGATTGTTCAAGGAAGTGGATATTT |
Reverse sequence
AGAACGAGCATTAGAGCCACAAGGTAGGATCACAAATATTTAGGTCAAAATATCCACTTCCTTGAACAATCAATGCTCACCGGAGTGCCC
TTAACAACTGTCGATACATGAGCAGGCAGAGTCCCTTCAAGATCTGGAACTGGAGCAAGCCGTGAAAGTCCAAAGTCAGCCACCTTTGCA ATAAACTTAGAGTCTAGCAATATATTGCTTGCCTTGATATCTCGATGGAATATGGGAGGATCAGCCTCCGTGTGCAAGTATAGAATGCCC TTAGCGGAACCTAAGGCAACTTTCAATCGCATAGCAAAACTTAGAGGTTCTTTACATTTACCTGTCACACCACAAGTCAACCCATTAAAT CCCATATAATATGGTCAAAGACTTGATTTCTGCTAGTGCTTTCCCCCAAAACCAATCCCCTAACATTAACCAGCAGAAAGACTGATATTC GACAATTTTCATCGGAAGGGATTTCGTTGGGGACAAAGCTAGATGTTGTGGATTAGTTAATCGTTTGCATACTTAAATATTTTCCTTATC AAAATAAAGTGCTAGAAGGAAAAGATTTGCACAAATAAATGGAGGCAAGAGCAATGTGAATTATA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U173217 | 2.3e-25 | 58 (9.3% of RFLP seq) | + |
SGN-U173217 | 2.3e-62 | 120 (19.2% of RFLP seq) | + |
SGN-U173217 | 2.2e-62 | 120 (19.8% of RFLP seq) | - |
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| ![]() Eggplant-COSII |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG589 was used as an overgo probe on plate 16 [well B3]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CTTAGGTTCCGCTAAGGGCATTCT
|
B sequence
CTCCGTGTGCAAGTATAGAATGCC
|
AB sequence
CTTAGGTTCCGCTAAGGGCATTCTATACTT
|
Marker sequence
ATAATGCTGGTTTACGAGTTTATGCCTAATGGTACTCTGAGAGACCACCT
ATCTGGTAAATAATTATATAATTCACATTGCTCTTGCCTCCATTTATTTG TGCAAATCTTTTCCTTCTAGCACTTTATTTTGATAAGGAAAATATTTAAG TATGCAAACGATTAACTAATCCACAACATCTAGCTTTGTCCCCAACGAAA TCCCTTCCGATGAAAATTGTCGAATATCAGTCTTTCTGCTGGTTAATGTT AGGGGATTGGTTTTGGGGGAAAGCACTAGCAGAAATCAAGTCTTTGACCA TATTATATGGGATTTAATGGGTTGACTTGTGGTGTGACAGGTAAATGTAA AGAACCTCTAAGTTTTGCTATGCGATTGAAAGTTGCCTTAGGTTCCGCTA AGGGCATTCTATACTTGCACACGGAGGCTGATCCTCCCATATTCCATCGA GATATCAAGGCAAGCAATATATTGCTAGACTCTAAGTTTATTGCAAAGGT GGCTGACTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATCTTGAAGGGA CTCTGCCTGCTCATGTATCGACAGTTGTTAAGGGCACTCCGGTGAGCATT GATTGTTCAAGGAAGTGGATATTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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