SGN Marker C2_At1g70160

SGN-M7009
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311015 (SGN)
131486 (CGN)		---
Lycopersicon CombinedSingleSGN-U216372---
Solanum tuberosumMultipleSGN-U266929---
ArabidopsisSingleAt1g70160 on TAIR---
Mapped locations  
Map: Tobacco N. tomentosiformis   
Map version
91 (location: 46609)
Chromosome
10
Position
50.90 cM
Confidence
F(LOD3)
Protocol
CAPS


Tobacco N. tomentosiformis

Map: Pepper-COSII   
Map version
58 (location: 41349)
Chromosome
11
Position
55.00 cM
Confidence
F(LOD3)
Protocol
CAPS


Pepper-COSII

PCR data   Exp. ID 43325
Forward primer (5'-3')
ACATGTGGAACGAAGCTCTGAATAA
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
TGGAGGTAAAGAAGGACAATTCTCATTC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38251)
Chromosome
5
Position
10.70 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39522
Forward primer (5'-3')
ATTTGGACTTGTATGGTATTCTTGCTG
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
TGGAGGTAAAGAAGGACAATTCTCATTC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25422)
Chromosome
1
Position
26.42 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At1g70160  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7009 marker 7009
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